This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
LYS 2
-0.0559
LYS 2
PHE 3
-0.0078
PHE 3
ALA 4
-0.0904
ALA 4
CYS 5
0.2901
CYS 5
PRO 6
-0.0809
PRO 6
GLU 7
0.0513
GLU 7
CYS 8
-0.0699
CYS 8
PRO 9
-0.1247
PRO 9
LYS 10
0.0416
LYS 10
ARG 11
0.0849
ARG 11
PHE 12
0.2021
PHE 12
MET 13
-0.0502
MET 13
ARG 14
-0.0091
ARG 14
SER 15
0.0863
SER 15
ASP 16
-0.0236
ASP 16
HIS 17
0.0412
HIS 17
LEU 18
0.0524
LEU 18
SER 19
0.0227
SER 19
LYS 20
0.0459
LYS 20
HIS 21
-0.0859
HIS 21
ILE 22
-0.0242
ILE 22
LYS 23
0.2270
LYS 23
THR 24
-0.1500
THR 24
HIS 25
-0.0406
HIS 25
GLN 26
0.1240
GLN 26
ASN 27
-0.1561
ASN 27
LYS 28
-0.0235
LYS 28
LYS 29
0.0151
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.