Should you encounter any unexpected behaviour,
please let us know.

* 3p6d *

CA strain for 2402131150102621916

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLN -7 GLN -6 0.0014

GLN -6 MET -5 0.0064

MET -5 GLY -4 -0.0190

GLY -4 ARG -3 -0.0122

ARG -3 GLY -2 -0.0560

GLY -2 SER -1 0.0922

SER -1 MET 0 -0.0142

MET 0 MET 0 0.0097

MET 0 CYS 1 0.0052

CYS 1 CYS 1 0.0005

CYS 1 ASP 2 0.0004

ASP 2 ALA 3 0.0221

ALA 3 PHE 4 -0.0024

PHE 4 VAL 5 -0.0008

VAL 5 GLY 6 0.0031

GLY 6 THR 7 0.0013

THR 7 TRP 8 0.0004

TRP 8 LYS 9 0.0005

LYS 9 LEU 10 0.0004

LEU 10 VAL 11 0.0001

VAL 11 SER 12 0.0007

SER 12 SER 13 0.0007

SER 13 GLU 14 0.0002

GLU 14 GLU 14 0.0021

GLU 14 ASN 15 0.0001

ASN 15 ASN 15 0.0188

ASN 15 PHE 16 -0.0001

PHE 16 ASP 17 0.0004

ASP 17 ASP 18 0.0004

ASP 18 TYR 19 -0.0004

TYR 19 MET 20 0.0001

MET 20 LYS 21 -0.0002

LYS 21 GLU 22 0.0001

GLU 22 VAL 23 0.0000

VAL 23 GLY 24 0.0001

GLY 24 VAL 25 -0.0001

VAL 25 GLY 26 -0.0003

GLY 26 PHE 27 0.0002

PHE 27 ALA 28 -0.0001

ALA 28 THR 29 0.0000

THR 29 ARG 30 -0.0003

ARG 30 LYS 31 -0.0002

LYS 31 VAL 32 0.0001

VAL 32 VAL 32 -0.0045

VAL 32 ALA 33 0.0004

ALA 33 GLY 34 0.0002

GLY 34 MET 35 -0.0004

MET 35 ALA 36 0.0001

ALA 36 LYS 37 0.0003

LYS 37 PRO 38 -0.0001

PRO 38 ASN 39 0.0006

ASN 39 MET 40 0.0003

MET 40 ILE 41 0.0007

ILE 41 ILE 42 0.0015

ILE 42 SER 43 0.0003

SER 43 VAL 44 0.0064

VAL 44 ASN 45 -0.0003

ASN 45 GLY 46 -0.0085

GLY 46 ASP 47 -0.0366

ASP 47 VAL 48 0.0023

VAL 48 ILE 49 0.0008

ILE 49 THR 50 0.0011

THR 50 ILE 51 0.0001

ILE 51 LYS 52 0.0007

LYS 52 SER 53 0.0004

SER 53 GLU 54 -0.0001

GLU 54 SER 55 0.0007

SER 55 SER 55 -0.0018

SER 55 THR 56 0.0004

THR 56 THR 56 -0.0004

THR 56 PHE 57 0.0002

PHE 57 PHE 57 -0.0002

PHE 57 LYS 58 -0.0002

LYS 58 LYS 58 -0.0011

LYS 58 ASN 59 0.0002

ASN 59 THR 60 0.0001

THR 60 GLU 61 0.0004

GLU 61 ILE 62 0.0002

ILE 62 SER 63 -0.0013

SER 63 PHE 64 0.0012

PHE 64 ILE 65 0.0001

ILE 65 LEU 66 0.0015

LEU 66 GLY 67 0.0001

GLY 67 GLN 68 0.0003

GLN 68 GLU 69 -0.0010

GLU 69 PHE 70 0.0001

PHE 70 ASP 71 0.0000

ASP 71 GLU 72 0.0003

GLU 72 VAL 73 0.0004

VAL 73 VAL 73 -0.0005

VAL 73 THR 74 -0.0004

THR 74 ALA 75 0.0000

ALA 75 ASP 76 0.0004

ASP 76 ASP 77 -0.0002

ASP 77 ARG 78 -0.0000

ARG 78 LYS 79 -0.0003

LYS 79 VAL 80 -0.0002

VAL 80 LYS 81 0.0002

LYS 81 SER 82 0.0001

SER 82 THR 83 0.0005

THR 83 ILE 84 0.0005

ILE 84 THR 85 0.0006

THR 85 LEU 86 0.0012

LEU 86 LEU 86 -0.0022

LEU 86 ASP 87 0.0009

ASP 87 ASP 87 0.0005

ASP 87 GLY 88 -0.0003

GLY 88 GLY 88 -0.0008

GLY 88 GLY 89 0.0003

GLY 89 GLY 89 -0.0002

GLY 89 VAL 90 -0.0032

VAL 90 LEU 91 0.0007

LEU 91 VAL 92 0.0003

VAL 92 HIS 93 -0.0004

HIS 93 VAL 94 0.0004

VAL 94 GLN 95 0.0001

GLN 95 LYS 96 0.0002

LYS 96 TRP 97 -0.0002

TRP 97 ASP 98 0.0000

ASP 98 ASP 98 -0.0004

ASP 98 GLY 99 0.0002

GLY 99 LYS 100 0.0001

LYS 100 SER 101 -0.0002

SER 101 THR 102 0.0001

THR 102 THR 103 -0.0002

THR 103 ILE 104 -0.0000

ILE 104 LYS 105 -0.0001

LYS 105 ARG 106 0.0008

ARG 106 LYS 107 0.0004

LYS 107 ARG 108 0.0011

ARG 108 GLU 109 0.0007

GLU 109 ASP 110 -0.0001

ASP 110 ASP 111 -0.0004

ASP 111 LYS 112 0.0002

LYS 112 LEU 113 0.0001

LEU 113 LEU 113 0.0315

LEU 113 VAL 114 0.0007

VAL 114 VAL 115 0.0004

VAL 115 GLU 116 0.0003

GLU 116 GLU 116 0.0108

GLU 116 CYS 117 0.0003

CYS 117 VAL 118 0.0003

VAL 118 MET 119 -0.0003

MET 119 MET 119 -0.0003

MET 119 LYS 120 -0.0001

LYS 120 LYS 120 0.0020

LYS 120 GLY 121 -0.0001

GLY 121 GLY 121 -0.0022

GLY 121 VAL 122 0.0004

VAL 122 THR 123 -0.0003

THR 123 SER 124 0.0004

SER 124 THR 125 0.0008

THR 125 ARG 126 0.0000

ARG 126 VAL 127 0.0008

VAL 127 TYR 128 0.0003

TYR 128 GLU 129 -0.0003

GLU 129 GLU 129 0.0042

GLU 129 ARG 130 0.0004

ARG 130 ALA 131 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 3p6d ***

CA strain for 2402131150102621916

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* 3p6d *