Should you encounter any unexpected behaviour,
please let us know.

* 3p6d *

CA strain for 2402131150102621916

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLN -7 GLN -6 -0.0017

GLN -6 MET -5 -0.0020

MET -5 GLY -4 0.0055

GLY -4 ARG -3 0.0429

ARG -3 GLY -2 -0.1179

GLY -2 SER -1 -0.0118

SER -1 MET 0 0.0426

MET 0 MET 0 -0.0031

MET 0 CYS 1 -0.0206

CYS 1 CYS 1 0.0065

CYS 1 ASP 2 -0.0182

ASP 2 ALA 3 -0.0774

ALA 3 PHE 4 0.0041

PHE 4 VAL 5 0.0016

VAL 5 GLY 6 -0.0156

GLY 6 THR 7 -0.0082

THR 7 TRP 8 -0.0008

TRP 8 LYS 9 -0.0043

LYS 9 LEU 10 -0.0025

LEU 10 VAL 11 0.0011

VAL 11 SER 12 -0.0027

SER 12 SER 13 -0.0032

SER 13 GLU 14 -0.0010

GLU 14 GLU 14 0.0008

GLU 14 ASN 15 -0.0018

ASN 15 ASN 15 0.0207

ASN 15 PHE 16 0.0012

PHE 16 ASP 17 -0.0007

ASP 17 ASP 18 0.0004

ASP 18 TYR 19 0.0015

TYR 19 MET 20 0.0009

MET 20 LYS 21 -0.0006

LYS 21 GLU 22 0.0003

GLU 22 VAL 23 -0.0006

VAL 23 GLY 24 0.0011

GLY 24 VAL 25 -0.0004

VAL 25 GLY 26 0.0008

GLY 26 PHE 27 0.0005

PHE 27 ALA 28 -0.0001

ALA 28 THR 29 0.0000

THR 29 ARG 30 -0.0001

ARG 30 LYS 31 0.0008

LYS 31 VAL 32 -0.0009

VAL 32 VAL 32 -0.0111

VAL 32 ALA 33 0.0009

ALA 33 GLY 34 -0.0000

GLY 34 MET 35 0.0019

MET 35 ALA 36 -0.0008

ALA 36 LYS 37 -0.0028

LYS 37 PRO 38 -0.0007

PRO 38 ASN 39 -0.0023

ASN 39 MET 40 -0.0007

MET 40 ILE 41 -0.0000

ILE 41 ILE 42 -0.0046

ILE 42 SER 43 0.0037

SER 43 VAL 44 -0.0010

VAL 44 ASN 45 0.0032

ASN 45 GLY 46 -0.0024

GLY 46 ASP 47 -0.0159

ASP 47 VAL 48 0.0002

VAL 48 ILE 49 -0.0013

ILE 49 THR 50 -0.0026

THR 50 ILE 51 -0.0006

ILE 51 LYS 52 0.0005

LYS 52 SER 53 -0.0020

SER 53 GLU 54 0.0009

GLU 54 SER 55 -0.0025

SER 55 SER 55 0.0003

SER 55 THR 56 -0.0016

THR 56 THR 56 0.0016

THR 56 PHE 57 0.0003

PHE 57 PHE 57 0.0006

PHE 57 LYS 58 0.0003

LYS 58 LYS 58 0.0006

LYS 58 ASN 59 -0.0010

ASN 59 THR 60 0.0002

THR 60 GLU 61 -0.0018

GLU 61 ILE 62 -0.0005

ILE 62 SER 63 -0.0018

SER 63 PHE 64 -0.0012

PHE 64 ILE 65 -0.0006

ILE 65 LEU 66 -0.0018

LEU 66 GLY 67 0.0023

GLY 67 GLN 68 -0.0011

GLN 68 GLU 69 0.0004

GLU 69 PHE 70 -0.0000

PHE 70 ASP 71 -0.0005

ASP 71 GLU 72 0.0006

GLU 72 VAL 73 -0.0001

VAL 73 VAL 73 0.0006

VAL 73 THR 74 0.0004

THR 74 ALA 75 0.0009

ALA 75 ASP 76 -0.0007

ASP 76 ASP 77 -0.0001

ASP 77 ARG 78 0.0006

ARG 78 LYS 79 -0.0001

LYS 79 VAL 80 0.0006

VAL 80 LYS 81 0.0008

LYS 81 SER 82 0.0003

SER 82 THR 83 0.0012

THR 83 ILE 84 0.0014

ILE 84 THR 85 -0.0009

THR 85 LEU 86 0.0038

LEU 86 LEU 86 -0.0002

LEU 86 ASP 87 0.0019

ASP 87 ASP 87 0.0002

ASP 87 GLY 88 0.0023

GLY 88 GLY 88 -0.0001

GLY 88 GLY 89 -0.0015

GLY 89 GLY 89 -0.0003

GLY 89 VAL 90 0.0092

VAL 90 LEU 91 -0.0020

LEU 91 VAL 92 0.0008

VAL 92 HIS 93 0.0039

HIS 93 VAL 94 0.0004

VAL 94 GLN 95 0.0026

GLN 95 LYS 96 0.0006

LYS 96 TRP 97 0.0010

TRP 97 ASP 98 0.0006

ASP 98 ASP 98 0.0075

ASP 98 GLY 99 0.0002

GLY 99 LYS 100 -0.0007

LYS 100 SER 101 0.0015

SER 101 THR 102 -0.0005

THR 102 THR 103 0.0030

THR 103 ILE 104 -0.0011

ILE 104 LYS 105 0.0010

LYS 105 ARG 106 -0.0040

ARG 106 LYS 107 -0.0020

LYS 107 ARG 108 -0.0042

ARG 108 GLU 109 -0.0026

GLU 109 ASP 110 -0.0005

ASP 110 ASP 111 0.0016

ASP 111 LYS 112 -0.0011

LYS 112 LEU 113 0.0007

LEU 113 LEU 113 0.0419

LEU 113 VAL 114 -0.0025

VAL 114 VAL 115 -0.0015

VAL 115 GLU 116 -0.0011

GLU 116 GLU 116 -0.0023

GLU 116 CYS 117 -0.0000

CYS 117 VAL 118 -0.0010

VAL 118 MET 119 0.0004

MET 119 MET 119 0.0004

MET 119 LYS 120 -0.0002

LYS 120 LYS 120 -0.0017

LYS 120 GLY 121 -0.0002

GLY 121 GLY 121 0.0006

GLY 121 VAL 122 -0.0003

VAL 122 THR 123 -0.0004

THR 123 SER 124 -0.0012

SER 124 THR 125 -0.0026

THR 125 ARG 126 -0.0011

ARG 126 VAL 127 -0.0018

VAL 127 TYR 128 -0.0027

TYR 128 GLU 129 0.0007

GLU 129 GLU 129 -0.0014

GLU 129 ARG 130 -0.0018

ARG 130 ALA 131 -0.0017

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 3p6d ***

CA strain for 2402131150102621916

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* 3p6d *