CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.0217
VAL 2PHE 3 0.0482
PHE 3GLY 4 0.1539
GLY 4ARG 5 0.1620
ARG 5CYS 6 -0.0026
CYS 6GLU 7 0.0839
GLU 7LEU 8 -0.0294
LEU 8ALA 9 0.0638
ALA 9ALA 10 -0.0290
ALA 10ALA 11 -0.0787
ALA 11MET 12 0.0162
MET 12LYS 13 -0.0309
LYS 13ARG 14 0.0068
ARG 14HIS 15 -0.1074
HIS 15GLY 16 0.0613
GLY 16LEU 17 0.0761
LEU 17ASP 18 -0.1213
ASP 18ASN 19 0.0139
ASN 19TYR 20 -0.1975
TYR 20ARG 21 0.0552
ARG 21GLY 22 -0.1741
GLY 22TYR 23 0.0609
TYR 23SER 24 -0.1921
SER 24LEU 25 0.0458
LEU 25GLY 26 0.0037
GLY 26ASN 27 -0.0454
ASN 27TRP 28 -0.0309
TRP 28VAL 29 -0.0690
VAL 29CYS 30 -0.0180
CYS 30ALA 31 0.0427
ALA 31ALA 32 -0.0594
ALA 32LYS 33 -0.0144
LYS 33PHE 34 -0.0786
PHE 34GLU 35 0.3097
GLU 35SER 36 -0.1921
SER 36ASN 37 0.1462
ASN 37PHE 38 -0.0721
PHE 38ASN 39 0.2651
ASN 39THR 40 0.0932
THR 40GLN 41 -0.0540
GLN 41ALA 42 -0.1631
ALA 42THR 43 0.2134
THR 43ASN 44 -0.2464
ASN 44ARG 45 0.2895
ARG 45ASN 46 -0.0086
ASN 46THR 47 0.1398
THR 47ASP 48 0.0005
ASP 48GLY 49 0.0856
GLY 49SER 50 0.0128
SER 50THR 51 0.0782
THR 51ASP 52 0.1467
ASP 52TYR 53 -0.1246
TYR 53GLY 54 0.2497
GLY 54ILE 55 0.1935
ILE 55LEU 56 -0.0668
LEU 56GLN 57 0.1362
GLN 57ILE 58 0.0290
ILE 58ASN 59 -0.1159
ASN 59SER 60 -0.0245
SER 60ARG 61 0.1180
ARG 61TRP 62 -0.1057
TRP 62TRP 63 0.0980
TRP 63CYS 64 -0.2735
CYS 64ASN 65 -0.1262
ASN 65ASP 66 -0.1845
ASP 66GLY 67 0.2432
GLY 67ARG 68 -0.2346
ARG 68THR 69 -0.0897
THR 69PRO 70 0.1675
PRO 70GLY 71 -0.1615
GLY 71SER 72 0.1778
SER 72ARG 73 -0.3097
ARG 73ASN 74 0.3713
ASN 74LEU 75 -0.2790
LEU 75CYS 76 0.0556
CYS 76ASN 77 -0.0636
ASN 77ILE 78 0.0830
ILE 78PRO 79 -0.1314
PRO 79CYS 80 -0.0744
CYS 80SER 81 -0.0086
SER 81ALA 82 -0.1003
ALA 82LEU 83 0.0312
LEU 83LEU 84 -0.0048
LEU 84SER 85 -0.1298
SER 85SER 86 0.2434
SER 86ASP 87 -0.0774
ASP 87ILE 88 -0.0199
ILE 88THR 89 0.0147
THR 89ALA 90 -0.0145
ALA 90SER 91 0.0172
SER 91VAL 92 -0.0308
VAL 92ASN 93 -0.0380
ASN 93CYS 94 -0.0256
CYS 94ALA 95 -0.0966
ALA 95LYS 96 0.0378
LYS 96LYS 97 -0.2589
LYS 97ILE 98 0.0315
ILE 98VAL 99 -0.2606
VAL 99SER 100 0.0601
SER 100ASP 101 -0.3057
ASP 101GLY 102 -0.1108
GLY 102ASN 103 0.0088
ASN 103GLY 104 0.0916
GLY 104MET 105 -0.0332
MET 105ASN 106 0.0547
ASN 106ALA 107 -0.2149
ALA 107TRP 108 -0.0182
TRP 108VAL 109 0.0503
VAL 109ALA 110 0.0031
ALA 110TRP 111 0.0335
TRP 111ARG 112 0.0137
ARG 112ASN 113 -0.0402
ASN 113ARG 114 0.0345
ARG 114CYS 115 0.0126
CYS 115LYS 116 -0.0143
LYS 116GLY 117 -0.0546
GLY 117THR 118 -0.0279
THR 118ASP 119 0.0729
ASP 119VAL 120 -0.0826
VAL 120GLN 121 0.0696
GLN 121ALA 122 -0.0462
ALA 122TRP 123 0.0824
TRP 123ILE 124 0.1029
ILE 124ARG 125 -0.0924
ARG 125GLY 126 -0.0121
GLY 126CYS 127 -0.0765
CYS 127ARG 128 0.2067
ARG 128LEU 129 -0.1666

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.