CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.1246
VAL 2PHE 3 0.0544
PHE 3GLY 4 -0.0112
GLY 4ARG 5 -0.0781
ARG 5CYS 6 0.2683
CYS 6GLU 7 -0.2968
GLU 7LEU 8 -0.0056
LEU 8ALA 9 -0.1367
ALA 9ALA 10 -0.0031
ALA 10ALA 11 -0.3163
ALA 11MET 12 0.1342
MET 12LYS 13 -0.2311
LYS 13ARG 14 -0.0575
ARG 14HIS 15 -0.2292
HIS 15GLY 16 -0.0335
GLY 16LEU 17 0.0450
LEU 17ASP 18 -0.2479
ASP 18ASN 19 0.1280
ASN 19TYR 20 -0.2127
TYR 20ARG 21 0.1095
ARG 21GLY 22 -0.0548
GLY 22TYR 23 -0.0490
TYR 23SER 24 0.0733
SER 24LEU 25 0.0722
LEU 25GLY 26 -0.0674
GLY 26ASN 27 0.0299
ASN 27TRP 28 -0.0233
TRP 28VAL 29 0.0625
VAL 29CYS 30 -0.0316
CYS 30ALA 31 0.0666
ALA 31ALA 32 0.0690
ALA 32LYS 33 0.0027
LYS 33PHE 34 -0.0325
PHE 34GLU 35 0.2526
GLU 35SER 36 0.1926
SER 36ASN 37 -0.1417
ASN 37PHE 38 0.0013
PHE 38ASN 39 0.0733
ASN 39THR 40 0.2747
THR 40GLN 41 -0.0946
GLN 41ALA 42 -0.1586
ALA 42THR 43 -0.5529
THR 43ASN 44 -0.2270
ASN 44ARG 45 -0.6131
ARG 45ASN 46 0.1016
ASN 46THR 47 -0.3620
THR 47ASP 48 0.1992
ASP 48GLY 49 0.1118
GLY 49SER 50 -0.1493
SER 50THR 51 -0.2113
THR 51ASP 52 -0.2079
ASP 52TYR 53 -0.0976
TYR 53GLY 54 -0.3980
GLY 54ILE 55 -0.2270
ILE 55LEU 56 0.0731
LEU 56GLN 57 -0.5287
GLN 57ILE 58 0.1389
ILE 58ASN 59 -0.6280
ASN 59SER 60 -0.0061
SER 60ARG 61 -0.0214
ARG 61TRP 62 -0.0412
TRP 62TRP 63 -0.0908
TRP 63CYS 64 0.0098
CYS 64ASN 65 -0.0598
ASN 65ASP 66 0.0271
ASP 66GLY 67 -0.0923
GLY 67ARG 68 0.2790
ARG 68THR 69 -0.0801
THR 69PRO 70 -0.0620
PRO 70GLY 71 0.0199
GLY 71SER 72 0.1755
SER 72ARG 73 0.0183
ARG 73ASN 74 0.0163
ASN 74LEU 75 -0.0073
LEU 75CYS 76 -0.0010
CYS 76ASN 77 -0.0109
ASN 77ILE 78 0.0643
ILE 78PRO 79 -0.0119
PRO 79CYS 80 0.0828
CYS 80SER 81 -0.0053
SER 81ALA 82 -0.1300
ALA 82LEU 83 0.1150
LEU 83LEU 84 0.0837
LEU 84SER 85 -0.3301
SER 85SER 86 -0.0105
SER 86ASP 87 0.1825
ASP 87ILE 88 0.0521
ILE 88THR 89 0.1717
THR 89ALA 90 -0.2851
ALA 90SER 91 0.1512
SER 91VAL 92 -0.2513
VAL 92ASN 93 -0.0256
ASN 93CYS 94 -0.1151
CYS 94ALA 95 0.0242
ALA 95LYS 96 -0.0355
LYS 96LYS 97 -0.0989
LYS 97ILE 98 0.0692
ILE 98VAL 99 -0.1253
VAL 99SER 100 -0.0496
SER 100ASP 101 0.0101
ASP 101GLY 102 -0.1136
GLY 102ASN 103 -0.1260
ASN 103GLY 104 0.1541
GLY 104MET 105 -0.0142
MET 105ASN 106 0.0096
ASN 106ALA 107 0.2572
ALA 107TRP 108 -0.1237
TRP 108VAL 109 0.2091
VAL 109ALA 110 -0.1209
ALA 110TRP 111 -0.0775
TRP 111ARG 112 -0.0200
ARG 112ASN 113 -0.1024
ASN 113ARG 114 0.0092
ARG 114CYS 115 -0.0601
CYS 115LYS 116 0.0526
LYS 116GLY 117 0.0078
GLY 117THR 118 0.0533
THR 118ASP 119 0.2314
ASP 119VAL 120 -0.1210
VAL 120GLN 121 0.1534
GLN 121ALA 122 -0.0263
ALA 122TRP 123 0.0433
TRP 123ILE 124 0.0496
ILE 124ARG 125 -0.0440
ARG 125GLY 126 0.0522
GLY 126CYS 127 -0.1602
CYS 127ARG 128 0.2700
ARG 128LEU 129 -0.3253

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.