CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0496
VAL 2PHE 3 -0.0751
PHE 3GLY 4 -0.3557
GLY 4ARG 5 -0.3798
ARG 5CYS 6 0.0131
CYS 6GLU 7 -0.2986
GLU 7LEU 8 0.0386
LEU 8ALA 9 -0.0500
ALA 9ALA 10 0.0121
ALA 10ALA 11 -0.0637
ALA 11MET 12 -0.0302
MET 12LYS 13 0.1967
LYS 13ARG 14 -0.0238
ARG 14HIS 15 0.0202
HIS 15GLY 16 0.0741
GLY 16LEU 17 -0.1010
LEU 17ASP 18 0.2277
ASP 18ASN 19 0.0553
ASN 19TYR 20 0.2164
TYR 20ARG 21 -0.0318
ARG 21GLY 22 0.2514
GLY 22TYR 23 -0.1098
TYR 23SER 24 0.4578
SER 24LEU 25 -0.0451
LEU 25GLY 26 -0.0832
GLY 26ASN 27 0.1344
ASN 27TRP 28 0.0628
TRP 28VAL 29 -0.0388
VAL 29CYS 30 -0.0068
CYS 30ALA 31 0.0273
ALA 31ALA 32 0.0600
ALA 32LYS 33 -0.0703
LYS 33PHE 34 0.0722
PHE 34GLU 35 0.1169
GLU 35SER 36 0.3385
SER 36ASN 37 -0.1348
ASN 37PHE 38 0.1272
PHE 38ASN 39 -0.2595
ASN 39THR 40 -0.0403
THR 40GLN 41 0.0603
GLN 41ALA 42 0.1010
ALA 42THR 43 0.1840
THR 43ASN 44 -0.1536
ASN 44ARG 45 0.3765
ARG 45ASN 46 0.0894
ASN 46THR 47 0.1234
THR 47ASP 48 0.0012
ASP 48GLY 49 0.1490
GLY 49SER 50 -0.0145
SER 50THR 51 0.1297
THR 51ASP 52 0.2154
ASP 52TYR 53 -0.0752
TYR 53GLY 54 0.2117
GLY 54ILE 55 0.0284
ILE 55LEU 56 0.0610
LEU 56GLN 57 0.1728
GLN 57ILE 58 -0.0781
ILE 58ASN 59 -0.2068
ASN 59SER 60 0.0536
SER 60ARG 61 0.1006
ARG 61TRP 62 -0.1339
TRP 62TRP 63 -0.1266
TRP 63CYS 64 -0.0262
CYS 64ASN 65 -0.0378
ASN 65ASP 66 -0.1162
ASP 66GLY 67 0.2894
GLY 67ARG 68 -0.1717
ARG 68THR 69 -0.2171
THR 69PRO 70 0.2561
PRO 70GLY 71 -0.3158
GLY 71SER 72 0.2135
SER 72ARG 73 -0.3617
ARG 73ASN 74 0.2335
ASN 74LEU 75 -0.1421
LEU 75CYS 76 -0.2498
CYS 76ASN 77 0.1271
ASN 77ILE 78 -0.2673
ILE 78PRO 79 0.1058
PRO 79CYS 80 -0.1894
CYS 80SER 81 0.0113
SER 81ALA 82 0.2232
ALA 82LEU 83 -0.0209
LEU 83LEU 84 -0.1285
LEU 84SER 85 0.2117
SER 85SER 86 -0.2510
SER 86ASP 87 0.0485
ASP 87ILE 88 0.0325
ILE 88THR 89 -0.1250
THR 89ALA 90 -0.0055
ALA 90SER 91 0.0250
SER 91VAL 92 0.1953
VAL 92ASN 93 -0.1342
ASN 93CYS 94 -0.1017
CYS 94ALA 95 0.1162
ALA 95LYS 96 0.0254
LYS 96LYS 97 -0.1248
LYS 97ILE 98 0.2437
ILE 98VAL 99 0.0327
VAL 99SER 100 0.0066
SER 100ASP 101 -0.0848
ASP 101GLY 102 -0.2285
GLY 102ASN 103 -0.0751
ASN 103GLY 104 0.0660
GLY 104MET 105 0.0621
MET 105ASN 106 -0.0675
ASN 106ALA 107 0.2979
ALA 107TRP 108 -0.1456
TRP 108VAL 109 0.0533
VAL 109ALA 110 -0.1090
ALA 110TRP 111 -0.0767
TRP 111ARG 112 -0.0508
ARG 112ASN 113 -0.0693
ASN 113ARG 114 -0.0686
ARG 114CYS 115 -0.1618
CYS 115LYS 116 0.1357
LYS 116GLY 117 0.0600
GLY 117THR 118 0.1093
THR 118ASP 119 -0.0338
ASP 119VAL 120 0.1548
VAL 120GLN 121 -0.0825
GLN 121ALA 122 0.0867
ALA 122TRP 123 -0.1542
TRP 123ILE 124 -0.1396
ILE 124ARG 125 0.1466
ARG 125GLY 126 0.0906
GLY 126CYS 127 -0.0189
CYS 127ARG 128 -0.3184
ARG 128LEU 129 0.3192

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.