This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0496
VAL 2
PHE 3
-0.0751
PHE 3
GLY 4
-0.3557
GLY 4
ARG 5
-0.3798
ARG 5
CYS 6
0.0131
CYS 6
GLU 7
-0.2986
GLU 7
LEU 8
0.0386
LEU 8
ALA 9
-0.0500
ALA 9
ALA 10
0.0121
ALA 10
ALA 11
-0.0637
ALA 11
MET 12
-0.0302
MET 12
LYS 13
0.1967
LYS 13
ARG 14
-0.0238
ARG 14
HIS 15
0.0202
HIS 15
GLY 16
0.0741
GLY 16
LEU 17
-0.1010
LEU 17
ASP 18
0.2277
ASP 18
ASN 19
0.0553
ASN 19
TYR 20
0.2164
TYR 20
ARG 21
-0.0318
ARG 21
GLY 22
0.2514
GLY 22
TYR 23
-0.1098
TYR 23
SER 24
0.4578
SER 24
LEU 25
-0.0451
LEU 25
GLY 26
-0.0832
GLY 26
ASN 27
0.1344
ASN 27
TRP 28
0.0628
TRP 28
VAL 29
-0.0388
VAL 29
CYS 30
-0.0068
CYS 30
ALA 31
0.0273
ALA 31
ALA 32
0.0600
ALA 32
LYS 33
-0.0703
LYS 33
PHE 34
0.0722
PHE 34
GLU 35
0.1169
GLU 35
SER 36
0.3385
SER 36
ASN 37
-0.1348
ASN 37
PHE 38
0.1272
PHE 38
ASN 39
-0.2595
ASN 39
THR 40
-0.0403
THR 40
GLN 41
0.0603
GLN 41
ALA 42
0.1010
ALA 42
THR 43
0.1840
THR 43
ASN 44
-0.1536
ASN 44
ARG 45
0.3765
ARG 45
ASN 46
0.0894
ASN 46
THR 47
0.1234
THR 47
ASP 48
0.0012
ASP 48
GLY 49
0.1490
GLY 49
SER 50
-0.0145
SER 50
THR 51
0.1297
THR 51
ASP 52
0.2154
ASP 52
TYR 53
-0.0752
TYR 53
GLY 54
0.2117
GLY 54
ILE 55
0.0284
ILE 55
LEU 56
0.0610
LEU 56
GLN 57
0.1728
GLN 57
ILE 58
-0.0781
ILE 58
ASN 59
-0.2068
ASN 59
SER 60
0.0536
SER 60
ARG 61
0.1006
ARG 61
TRP 62
-0.1339
TRP 62
TRP 63
-0.1266
TRP 63
CYS 64
-0.0262
CYS 64
ASN 65
-0.0378
ASN 65
ASP 66
-0.1162
ASP 66
GLY 67
0.2894
GLY 67
ARG 68
-0.1717
ARG 68
THR 69
-0.2171
THR 69
PRO 70
0.2561
PRO 70
GLY 71
-0.3158
GLY 71
SER 72
0.2135
SER 72
ARG 73
-0.3617
ARG 73
ASN 74
0.2335
ASN 74
LEU 75
-0.1421
LEU 75
CYS 76
-0.2498
CYS 76
ASN 77
0.1271
ASN 77
ILE 78
-0.2673
ILE 78
PRO 79
0.1058
PRO 79
CYS 80
-0.1894
CYS 80
SER 81
0.0113
SER 81
ALA 82
0.2232
ALA 82
LEU 83
-0.0209
LEU 83
LEU 84
-0.1285
LEU 84
SER 85
0.2117
SER 85
SER 86
-0.2510
SER 86
ASP 87
0.0485
ASP 87
ILE 88
0.0325
ILE 88
THR 89
-0.1250
THR 89
ALA 90
-0.0055
ALA 90
SER 91
0.0250
SER 91
VAL 92
0.1953
VAL 92
ASN 93
-0.1342
ASN 93
CYS 94
-0.1017
CYS 94
ALA 95
0.1162
ALA 95
LYS 96
0.0254
LYS 96
LYS 97
-0.1248
LYS 97
ILE 98
0.2437
ILE 98
VAL 99
0.0327
VAL 99
SER 100
0.0066
SER 100
ASP 101
-0.0848
ASP 101
GLY 102
-0.2285
GLY 102
ASN 103
-0.0751
ASN 103
GLY 104
0.0660
GLY 104
MET 105
0.0621
MET 105
ASN 106
-0.0675
ASN 106
ALA 107
0.2979
ALA 107
TRP 108
-0.1456
TRP 108
VAL 109
0.0533
VAL 109
ALA 110
-0.1090
ALA 110
TRP 111
-0.0767
TRP 111
ARG 112
-0.0508
ARG 112
ASN 113
-0.0693
ASN 113
ARG 114
-0.0686
ARG 114
CYS 115
-0.1618
CYS 115
LYS 116
0.1357
LYS 116
GLY 117
0.0600
GLY 117
THR 118
0.1093
THR 118
ASP 119
-0.0338
ASP 119
VAL 120
0.1548
VAL 120
GLN 121
-0.0825
GLN 121
ALA 122
0.0867
ALA 122
TRP 123
-0.1542
TRP 123
ILE 124
-0.1396
ILE 124
ARG 125
0.1466
ARG 125
GLY 126
0.0906
GLY 126
CYS 127
-0.0189
CYS 127
ARG 128
-0.3184
ARG 128
LEU 129
0.3192
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.