This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0489
VAL 2
PHE 3
0.0519
PHE 3
GLY 4
-0.2747
GLY 4
ARG 5
-0.1758
ARG 5
CYS 6
-0.1621
CYS 6
GLU 7
-0.1142
GLU 7
LEU 8
-0.0157
LEU 8
ALA 9
-0.1155
ALA 9
ALA 10
0.1219
ALA 10
ALA 11
-0.1702
ALA 11
MET 12
0.1463
MET 12
LYS 13
-0.0427
LYS 13
ARG 14
0.0762
ARG 14
HIS 15
-0.2340
HIS 15
GLY 16
0.3490
GLY 16
LEU 17
0.0310
LEU 17
ASP 18
-0.1676
ASP 18
ASN 19
0.1806
ASN 19
TYR 20
-0.1178
TYR 20
ARG 21
0.1555
ARG 21
GLY 22
-0.0750
GLY 22
TYR 23
-0.0507
TYR 23
SER 24
0.0646
SER 24
LEU 25
0.0979
LEU 25
GLY 26
0.0053
GLY 26
ASN 27
0.0965
ASN 27
TRP 28
-0.1576
TRP 28
VAL 29
-0.0462
VAL 29
CYS 30
0.2182
CYS 30
ALA 31
-0.2699
ALA 31
ALA 32
0.1118
ALA 32
LYS 33
0.0314
LYS 33
PHE 34
0.0786
PHE 34
GLU 35
-0.4847
GLU 35
SER 36
-0.0779
SER 36
ASN 37
-0.0314
ASN 37
PHE 38
0.0731
PHE 38
ASN 39
-0.3363
ASN 39
THR 40
-0.1032
THR 40
GLN 41
0.0524
GLN 41
ALA 42
-0.0307
ALA 42
THR 43
-0.2085
THR 43
ASN 44
0.0250
ASN 44
ARG 45
-0.1148
ARG 45
ASN 46
-0.2181
ASN 46
THR 47
0.2334
THR 47
ASP 48
-0.0636
ASP 48
GLY 49
0.1188
GLY 49
SER 50
-0.0464
SER 50
THR 51
-0.1749
THR 51
ASP 52
-0.2830
ASP 52
TYR 53
0.0817
TYR 53
GLY 54
-0.3664
GLY 54
ILE 55
-0.4687
ILE 55
LEU 56
0.1182
LEU 56
GLN 57
-0.1338
GLN 57
ILE 58
0.0115
ILE 58
ASN 59
-0.1747
ASN 59
SER 60
-0.1097
SER 60
ARG 61
-0.0970
ARG 61
TRP 62
-0.0024
TRP 62
TRP 63
-0.0310
TRP 63
CYS 64
-0.1293
CYS 64
ASN 65
-0.1451
ASN 65
ASP 66
-0.0282
ASP 66
GLY 67
-0.1988
GLY 67
ARG 68
-0.1054
ARG 68
THR 69
0.2056
THR 69
PRO 70
-0.1880
PRO 70
GLY 71
0.0694
GLY 71
SER 72
-0.1769
SER 72
ARG 73
-0.0516
ARG 73
ASN 74
0.1633
ASN 74
LEU 75
-0.1471
LEU 75
CYS 76
-0.1398
CYS 76
ASN 77
-0.0416
ASN 77
ILE 78
-0.1302
ILE 78
PRO 79
-0.0166
PRO 79
CYS 80
0.1508
CYS 80
SER 81
0.0052
SER 81
ALA 82
-0.0962
ALA 82
LEU 83
-0.1204
LEU 83
LEU 84
0.2417
LEU 84
SER 85
-0.0952
SER 85
SER 86
-0.4520
SER 86
ASP 87
0.3582
ASP 87
ILE 88
0.0519
ILE 88
THR 89
0.0318
THR 89
ALA 90
-0.4470
ALA 90
SER 91
-0.0396
SER 91
VAL 92
0.0016
VAL 92
ASN 93
-0.2775
ASN 93
CYS 94
-0.1233
CYS 94
ALA 95
-0.2057
ALA 95
LYS 96
0.1107
LYS 96
LYS 97
-0.2504
LYS 97
ILE 98
0.0835
ILE 98
VAL 99
-0.1333
VAL 99
SER 100
-0.0013
SER 100
ASP 101
-0.1600
ASP 101
GLY 102
0.0655
GLY 102
ASN 103
0.0246
ASN 103
GLY 104
0.1375
GLY 104
MET 105
0.0540
MET 105
ASN 106
0.1089
ASN 106
ALA 107
-0.2449
ALA 107
TRP 108
0.0792
TRP 108
VAL 109
0.0325
VAL 109
ALA 110
0.1030
ALA 110
TRP 111
0.0163
TRP 111
ARG 112
0.1342
ARG 112
ASN 113
-0.0143
ASN 113
ARG 114
0.1444
ARG 114
CYS 115
0.1047
CYS 115
LYS 116
0.0529
LYS 116
GLY 117
-0.0885
GLY 117
THR 118
0.0410
THR 118
ASP 119
0.2582
ASP 119
VAL 120
-0.2771
VAL 120
GLN 121
0.2218
GLN 121
ALA 122
-0.1145
ALA 122
TRP 123
-0.1965
TRP 123
ILE 124
0.0143
ILE 124
ARG 125
-0.1624
ARG 125
GLY 126
0.1746
GLY 126
CYS 127
0.0343
CYS 127
ARG 128
-0.4891
ARG 128
LEU 129
0.4628
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.