CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0489
VAL 2PHE 3 0.0519
PHE 3GLY 4 -0.2747
GLY 4ARG 5 -0.1758
ARG 5CYS 6 -0.1621
CYS 6GLU 7 -0.1142
GLU 7LEU 8 -0.0157
LEU 8ALA 9 -0.1155
ALA 9ALA 10 0.1219
ALA 10ALA 11 -0.1702
ALA 11MET 12 0.1463
MET 12LYS 13 -0.0427
LYS 13ARG 14 0.0762
ARG 14HIS 15 -0.2340
HIS 15GLY 16 0.3490
GLY 16LEU 17 0.0310
LEU 17ASP 18 -0.1676
ASP 18ASN 19 0.1806
ASN 19TYR 20 -0.1178
TYR 20ARG 21 0.1555
ARG 21GLY 22 -0.0750
GLY 22TYR 23 -0.0507
TYR 23SER 24 0.0646
SER 24LEU 25 0.0979
LEU 25GLY 26 0.0053
GLY 26ASN 27 0.0965
ASN 27TRP 28 -0.1576
TRP 28VAL 29 -0.0462
VAL 29CYS 30 0.2182
CYS 30ALA 31 -0.2699
ALA 31ALA 32 0.1118
ALA 32LYS 33 0.0314
LYS 33PHE 34 0.0786
PHE 34GLU 35 -0.4847
GLU 35SER 36 -0.0779
SER 36ASN 37 -0.0314
ASN 37PHE 38 0.0731
PHE 38ASN 39 -0.3363
ASN 39THR 40 -0.1032
THR 40GLN 41 0.0524
GLN 41ALA 42 -0.0307
ALA 42THR 43 -0.2085
THR 43ASN 44 0.0250
ASN 44ARG 45 -0.1148
ARG 45ASN 46 -0.2181
ASN 46THR 47 0.2334
THR 47ASP 48 -0.0636
ASP 48GLY 49 0.1188
GLY 49SER 50 -0.0464
SER 50THR 51 -0.1749
THR 51ASP 52 -0.2830
ASP 52TYR 53 0.0817
TYR 53GLY 54 -0.3664
GLY 54ILE 55 -0.4687
ILE 55LEU 56 0.1182
LEU 56GLN 57 -0.1338
GLN 57ILE 58 0.0115
ILE 58ASN 59 -0.1747
ASN 59SER 60 -0.1097
SER 60ARG 61 -0.0970
ARG 61TRP 62 -0.0024
TRP 62TRP 63 -0.0310
TRP 63CYS 64 -0.1293
CYS 64ASN 65 -0.1451
ASN 65ASP 66 -0.0282
ASP 66GLY 67 -0.1988
GLY 67ARG 68 -0.1054
ARG 68THR 69 0.2056
THR 69PRO 70 -0.1880
PRO 70GLY 71 0.0694
GLY 71SER 72 -0.1769
SER 72ARG 73 -0.0516
ARG 73ASN 74 0.1633
ASN 74LEU 75 -0.1471
LEU 75CYS 76 -0.1398
CYS 76ASN 77 -0.0416
ASN 77ILE 78 -0.1302
ILE 78PRO 79 -0.0166
PRO 79CYS 80 0.1508
CYS 80SER 81 0.0052
SER 81ALA 82 -0.0962
ALA 82LEU 83 -0.1204
LEU 83LEU 84 0.2417
LEU 84SER 85 -0.0952
SER 85SER 86 -0.4520
SER 86ASP 87 0.3582
ASP 87ILE 88 0.0519
ILE 88THR 89 0.0318
THR 89ALA 90 -0.4470
ALA 90SER 91 -0.0396
SER 91VAL 92 0.0016
VAL 92ASN 93 -0.2775
ASN 93CYS 94 -0.1233
CYS 94ALA 95 -0.2057
ALA 95LYS 96 0.1107
LYS 96LYS 97 -0.2504
LYS 97ILE 98 0.0835
ILE 98VAL 99 -0.1333
VAL 99SER 100 -0.0013
SER 100ASP 101 -0.1600
ASP 101GLY 102 0.0655
GLY 102ASN 103 0.0246
ASN 103GLY 104 0.1375
GLY 104MET 105 0.0540
MET 105ASN 106 0.1089
ASN 106ALA 107 -0.2449
ALA 107TRP 108 0.0792
TRP 108VAL 109 0.0325
VAL 109ALA 110 0.1030
ALA 110TRP 111 0.0163
TRP 111ARG 112 0.1342
ARG 112ASN 113 -0.0143
ASN 113ARG 114 0.1444
ARG 114CYS 115 0.1047
CYS 115LYS 116 0.0529
LYS 116GLY 117 -0.0885
GLY 117THR 118 0.0410
THR 118ASP 119 0.2582
ASP 119VAL 120 -0.2771
VAL 120GLN 121 0.2218
GLN 121ALA 122 -0.1145
ALA 122TRP 123 -0.1965
TRP 123ILE 124 0.0143
ILE 124ARG 125 -0.1624
ARG 125GLY 126 0.1746
GLY 126CYS 127 0.0343
CYS 127ARG 128 -0.4891
ARG 128LEU 129 0.4628

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.