CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0131
VAL 2PHE 3 -0.0336
PHE 3GLY 4 -0.0173
GLY 4ARG 5 -0.0635
ARG 5CYS 6 -0.1523
CYS 6GLU 7 -0.0560
GLU 7LEU 8 -0.0171
LEU 8ALA 9 -0.0467
ALA 9ALA 10 0.0590
ALA 10ALA 11 -0.0223
ALA 11MET 12 0.0070
MET 12LYS 13 0.0237
LYS 13ARG 14 0.0033
ARG 14HIS 15 -0.0618
HIS 15GLY 16 -0.0810
GLY 16LEU 17 0.0455
LEU 17ASP 18 -0.0316
ASP 18ASN 19 -0.1158
ASN 19TYR 20 -0.0088
TYR 20ARG 21 -0.0779
ARG 21GLY 22 0.0306
GLY 22TYR 23 0.2371
TYR 23SER 24 -0.6477
SER 24LEU 25 -0.0457
LEU 25GLY 26 0.1851
GLY 26ASN 27 -0.2982
ASN 27TRP 28 0.0578
TRP 28VAL 29 -0.1614
VAL 29CYS 30 -0.0270
CYS 30ALA 31 -0.0016
ALA 31ALA 32 0.0302
ALA 32LYS 33 -0.0804
LYS 33PHE 34 0.0890
PHE 34GLU 35 -0.3620
GLU 35SER 36 0.2888
SER 36ASN 37 -0.1057
ASN 37PHE 38 0.0196
PHE 38ASN 39 -0.0337
ASN 39THR 40 -0.0784
THR 40GLN 41 0.0206
GLN 41ALA 42 -0.0016
ALA 42THR 43 0.0548
THR 43ASN 44 -0.1559
ASN 44ARG 45 0.1365
ARG 45ASN 46 0.1553
ASN 46THR 47 -0.2594
THR 47ASP 48 0.1001
ASP 48GLY 49 0.0229
GLY 49SER 50 -0.0392
SER 50THR 51 0.0653
THR 51ASP 52 0.0568
ASP 52TYR 53 -0.1278
TYR 53GLY 54 0.0658
GLY 54ILE 55 -0.0178
ILE 55LEU 56 0.2472
LEU 56GLN 57 0.0548
GLN 57ILE 58 -0.2416
ILE 58ASN 59 -0.2308
ASN 59SER 60 0.0517
SER 60ARG 61 0.0228
ARG 61TRP 62 -0.0619
TRP 62TRP 63 -0.2531
TRP 63CYS 64 0.3751
CYS 64ASN 65 0.0348
ASN 65ASP 66 0.0280
ASP 66GLY 67 0.0855
GLY 67ARG 68 -0.0034
ARG 68THR 69 -0.1652
THR 69PRO 70 0.1341
PRO 70GLY 71 -0.1749
GLY 71SER 72 0.1078
SER 72ARG 73 -0.0866
ARG 73ASN 74 -0.1052
ASN 74LEU 75 0.0963
LEU 75CYS 76 -0.1860
CYS 76ASN 77 0.0841
ASN 77ILE 78 -0.1658
ILE 78PRO 79 0.0902
PRO 79CYS 80 -0.1103
CYS 80SER 81 0.0571
SER 81ALA 82 0.0383
ALA 82LEU 83 -0.0076
LEU 83LEU 84 0.0521
LEU 84SER 85 -0.0077
SER 85SER 86 0.0137
SER 86ASP 87 0.0401
ASP 87ILE 88 0.0387
ILE 88THR 89 0.0063
THR 89ALA 90 -0.1908
ALA 90SER 91 -0.0257
SER 91VAL 92 -0.0061
VAL 92ASN 93 -0.1396
ASN 93CYS 94 -0.0753
CYS 94ALA 95 -0.0348
ALA 95LYS 96 -0.0106
LYS 96LYS 97 -0.0733
LYS 97ILE 98 0.0696
ILE 98VAL 99 0.2142
VAL 99SER 100 -0.0869
SER 100ASP 101 0.1540
ASP 101GLY 102 0.1202
GLY 102ASN 103 -0.0274
ASN 103GLY 104 -0.3560
GLY 104MET 105 -0.1915
MET 105ASN 106 -0.1288
ASN 106ALA 107 0.4312
ALA 107TRP 108 0.2323
TRP 108VAL 109 -0.4632
VAL 109ALA 110 0.0728
ALA 110TRP 111 0.1186
TRP 111ARG 112 -0.0823
ARG 112ASN 113 0.0547
ASN 113ARG 114 -0.0406
ARG 114CYS 115 0.2699
CYS 115LYS 116 -0.3596
LYS 116GLY 117 0.0586
GLY 117THR 118 -0.1173
THR 118ASP 119 -0.0455
ASP 119VAL 120 0.0905
VAL 120GLN 121 -0.0615
GLN 121ALA 122 -0.0105
ALA 122TRP 123 0.1305
TRP 123ILE 124 0.1794
ILE 124ARG 125 -0.1921
ARG 125GLY 126 -0.0675
GLY 126CYS 127 0.1969
CYS 127ARG 128 -0.4717
ARG 128LEU 129 0.2664

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.