This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0131
VAL 2
PHE 3
-0.0336
PHE 3
GLY 4
-0.0173
GLY 4
ARG 5
-0.0635
ARG 5
CYS 6
-0.1523
CYS 6
GLU 7
-0.0560
GLU 7
LEU 8
-0.0171
LEU 8
ALA 9
-0.0467
ALA 9
ALA 10
0.0590
ALA 10
ALA 11
-0.0223
ALA 11
MET 12
0.0070
MET 12
LYS 13
0.0237
LYS 13
ARG 14
0.0033
ARG 14
HIS 15
-0.0618
HIS 15
GLY 16
-0.0810
GLY 16
LEU 17
0.0455
LEU 17
ASP 18
-0.0316
ASP 18
ASN 19
-0.1158
ASN 19
TYR 20
-0.0088
TYR 20
ARG 21
-0.0779
ARG 21
GLY 22
0.0306
GLY 22
TYR 23
0.2371
TYR 23
SER 24
-0.6477
SER 24
LEU 25
-0.0457
LEU 25
GLY 26
0.1851
GLY 26
ASN 27
-0.2982
ASN 27
TRP 28
0.0578
TRP 28
VAL 29
-0.1614
VAL 29
CYS 30
-0.0270
CYS 30
ALA 31
-0.0016
ALA 31
ALA 32
0.0302
ALA 32
LYS 33
-0.0804
LYS 33
PHE 34
0.0890
PHE 34
GLU 35
-0.3620
GLU 35
SER 36
0.2888
SER 36
ASN 37
-0.1057
ASN 37
PHE 38
0.0196
PHE 38
ASN 39
-0.0337
ASN 39
THR 40
-0.0784
THR 40
GLN 41
0.0206
GLN 41
ALA 42
-0.0016
ALA 42
THR 43
0.0548
THR 43
ASN 44
-0.1559
ASN 44
ARG 45
0.1365
ARG 45
ASN 46
0.1553
ASN 46
THR 47
-0.2594
THR 47
ASP 48
0.1001
ASP 48
GLY 49
0.0229
GLY 49
SER 50
-0.0392
SER 50
THR 51
0.0653
THR 51
ASP 52
0.0568
ASP 52
TYR 53
-0.1278
TYR 53
GLY 54
0.0658
GLY 54
ILE 55
-0.0178
ILE 55
LEU 56
0.2472
LEU 56
GLN 57
0.0548
GLN 57
ILE 58
-0.2416
ILE 58
ASN 59
-0.2308
ASN 59
SER 60
0.0517
SER 60
ARG 61
0.0228
ARG 61
TRP 62
-0.0619
TRP 62
TRP 63
-0.2531
TRP 63
CYS 64
0.3751
CYS 64
ASN 65
0.0348
ASN 65
ASP 66
0.0280
ASP 66
GLY 67
0.0855
GLY 67
ARG 68
-0.0034
ARG 68
THR 69
-0.1652
THR 69
PRO 70
0.1341
PRO 70
GLY 71
-0.1749
GLY 71
SER 72
0.1078
SER 72
ARG 73
-0.0866
ARG 73
ASN 74
-0.1052
ASN 74
LEU 75
0.0963
LEU 75
CYS 76
-0.1860
CYS 76
ASN 77
0.0841
ASN 77
ILE 78
-0.1658
ILE 78
PRO 79
0.0902
PRO 79
CYS 80
-0.1103
CYS 80
SER 81
0.0571
SER 81
ALA 82
0.0383
ALA 82
LEU 83
-0.0076
LEU 83
LEU 84
0.0521
LEU 84
SER 85
-0.0077
SER 85
SER 86
0.0137
SER 86
ASP 87
0.0401
ASP 87
ILE 88
0.0387
ILE 88
THR 89
0.0063
THR 89
ALA 90
-0.1908
ALA 90
SER 91
-0.0257
SER 91
VAL 92
-0.0061
VAL 92
ASN 93
-0.1396
ASN 93
CYS 94
-0.0753
CYS 94
ALA 95
-0.0348
ALA 95
LYS 96
-0.0106
LYS 96
LYS 97
-0.0733
LYS 97
ILE 98
0.0696
ILE 98
VAL 99
0.2142
VAL 99
SER 100
-0.0869
SER 100
ASP 101
0.1540
ASP 101
GLY 102
0.1202
GLY 102
ASN 103
-0.0274
ASN 103
GLY 104
-0.3560
GLY 104
MET 105
-0.1915
MET 105
ASN 106
-0.1288
ASN 106
ALA 107
0.4312
ALA 107
TRP 108
0.2323
TRP 108
VAL 109
-0.4632
VAL 109
ALA 110
0.0728
ALA 110
TRP 111
0.1186
TRP 111
ARG 112
-0.0823
ARG 112
ASN 113
0.0547
ASN 113
ARG 114
-0.0406
ARG 114
CYS 115
0.2699
CYS 115
LYS 116
-0.3596
LYS 116
GLY 117
0.0586
GLY 117
THR 118
-0.1173
THR 118
ASP 119
-0.0455
ASP 119
VAL 120
0.0905
VAL 120
GLN 121
-0.0615
GLN 121
ALA 122
-0.0105
ALA 122
TRP 123
0.1305
TRP 123
ILE 124
0.1794
ILE 124
ARG 125
-0.1921
ARG 125
GLY 126
-0.0675
GLY 126
CYS 127
0.1969
CYS 127
ARG 128
-0.4717
ARG 128
LEU 129
0.2664
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.