This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0850
VAL 2
PHE 3
0.1633
PHE 3
GLY 4
0.0616
GLY 4
ARG 5
-0.0214
ARG 5
CYS 6
-0.0124
CYS 6
GLU 7
-0.0585
GLU 7
LEU 8
-0.0326
LEU 8
ALA 9
0.0854
ALA 9
ALA 10
-0.0844
ALA 10
ALA 11
0.0171
ALA 11
MET 12
0.0137
MET 12
LYS 13
0.0006
LYS 13
ARG 14
0.0370
ARG 14
HIS 15
0.0244
HIS 15
GLY 16
0.1694
GLY 16
LEU 17
-0.0447
LEU 17
ASP 18
0.0724
ASP 18
ASN 19
0.1017
ASN 19
TYR 20
0.0954
TYR 20
ARG 21
0.0558
ARG 21
GLY 22
0.0277
GLY 22
TYR 23
-0.1054
TYR 23
SER 24
0.1254
SER 24
LEU 25
0.0328
LEU 25
GLY 26
0.0091
GLY 26
ASN 27
0.1011
ASN 27
TRP 28
0.0915
TRP 28
VAL 29
0.1337
VAL 29
CYS 30
-0.1253
CYS 30
ALA 31
0.2009
ALA 31
ALA 32
-0.2691
ALA 32
LYS 33
0.1593
LYS 33
PHE 34
-0.1751
PHE 34
GLU 35
0.1495
GLU 35
SER 36
-0.7108
SER 36
ASN 37
0.2193
ASN 37
PHE 38
-0.0526
PHE 38
ASN 39
0.0727
ASN 39
THR 40
0.0266
THR 40
GLN 41
-0.0318
GLN 41
ALA 42
-0.2972
ALA 42
THR 43
-0.4156
THR 43
ASN 44
-0.3566
ASN 44
ARG 45
-0.3410
ARG 45
ASN 46
-0.1430
ASN 46
THR 47
0.0111
THR 47
ASP 48
0.1039
ASP 48
GLY 49
0.4276
GLY 49
SER 50
-0.0644
SER 50
THR 51
-0.1690
THR 51
ASP 52
-0.0208
ASP 52
TYR 53
-0.1216
TYR 53
GLY 54
0.0954
GLY 54
ILE 55
0.1235
ILE 55
LEU 56
-0.2336
LEU 56
GLN 57
-0.1156
GLN 57
ILE 58
0.1807
ILE 58
ASN 59
0.0199
ASN 59
SER 60
0.0526
SER 60
ARG 61
-0.0397
ARG 61
TRP 62
0.1211
TRP 62
TRP 63
0.0959
TRP 63
CYS 64
-0.0544
CYS 64
ASN 65
0.0641
ASN 65
ASP 66
-0.2415
ASP 66
GLY 67
0.4281
GLY 67
ARG 68
0.0033
ARG 68
THR 69
-0.2252
THR 69
PRO 70
0.1676
PRO 70
GLY 71
-0.1147
GLY 71
SER 72
0.4435
SER 72
ARG 73
-0.0733
ARG 73
ASN 74
-0.1674
ASN 74
LEU 75
0.0080
LEU 75
CYS 76
0.1365
CYS 76
ASN 77
0.1385
ASN 77
ILE 78
-0.1162
ILE 78
PRO 79
0.0794
PRO 79
CYS 80
-0.1843
CYS 80
SER 81
0.0010
SER 81
ALA 82
0.0770
ALA 82
LEU 83
-0.0107
LEU 83
LEU 84
0.0141
LEU 84
SER 85
-0.2135
SER 85
SER 86
0.0347
SER 86
ASP 87
0.0331
ASP 87
ILE 88
-0.0712
ILE 88
THR 89
-0.0229
THR 89
ALA 90
0.1362
ALA 90
SER 91
0.0179
SER 91
VAL 92
0.0276
VAL 92
ASN 93
0.1069
ASN 93
CYS 94
0.0072
CYS 94
ALA 95
0.2701
ALA 95
LYS 96
-0.0818
LYS 96
LYS 97
0.2225
LYS 97
ILE 98
0.1887
ILE 98
VAL 99
0.0570
VAL 99
SER 100
0.0318
SER 100
ASP 101
0.0092
ASP 101
GLY 102
0.0424
GLY 102
ASN 103
0.1198
ASN 103
GLY 104
0.0824
GLY 104
MET 105
0.0283
MET 105
ASN 106
-0.0379
ASN 106
ALA 107
0.1902
ALA 107
TRP 108
-0.1462
TRP 108
VAL 109
0.1595
VAL 109
ALA 110
0.0402
ALA 110
TRP 111
-0.0291
TRP 111
ARG 112
-0.1126
ARG 112
ASN 113
0.1540
ASN 113
ARG 114
0.0084
ARG 114
CYS 115
0.1436
CYS 115
LYS 116
-0.1479
LYS 116
GLY 117
0.1114
GLY 117
THR 118
0.0021
THR 118
ASP 119
0.1814
ASP 119
VAL 120
0.0290
VAL 120
GLN 121
0.1538
GLN 121
ALA 122
-0.0716
ALA 122
TRP 123
0.0329
TRP 123
ILE 124
0.1106
ILE 124
ARG 125
-0.0766
ARG 125
GLY 126
0.1967
GLY 126
CYS 127
-0.1213
CYS 127
ARG 128
-0.1705
ARG 128
LEU 129
0.4306
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.