CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0850
VAL 2PHE 3 0.1633
PHE 3GLY 4 0.0616
GLY 4ARG 5 -0.0214
ARG 5CYS 6 -0.0124
CYS 6GLU 7 -0.0585
GLU 7LEU 8 -0.0326
LEU 8ALA 9 0.0854
ALA 9ALA 10 -0.0844
ALA 10ALA 11 0.0171
ALA 11MET 12 0.0137
MET 12LYS 13 0.0006
LYS 13ARG 14 0.0370
ARG 14HIS 15 0.0244
HIS 15GLY 16 0.1694
GLY 16LEU 17 -0.0447
LEU 17ASP 18 0.0724
ASP 18ASN 19 0.1017
ASN 19TYR 20 0.0954
TYR 20ARG 21 0.0558
ARG 21GLY 22 0.0277
GLY 22TYR 23 -0.1054
TYR 23SER 24 0.1254
SER 24LEU 25 0.0328
LEU 25GLY 26 0.0091
GLY 26ASN 27 0.1011
ASN 27TRP 28 0.0915
TRP 28VAL 29 0.1337
VAL 29CYS 30 -0.1253
CYS 30ALA 31 0.2009
ALA 31ALA 32 -0.2691
ALA 32LYS 33 0.1593
LYS 33PHE 34 -0.1751
PHE 34GLU 35 0.1495
GLU 35SER 36 -0.7108
SER 36ASN 37 0.2193
ASN 37PHE 38 -0.0526
PHE 38ASN 39 0.0727
ASN 39THR 40 0.0266
THR 40GLN 41 -0.0318
GLN 41ALA 42 -0.2972
ALA 42THR 43 -0.4156
THR 43ASN 44 -0.3566
ASN 44ARG 45 -0.3410
ARG 45ASN 46 -0.1430
ASN 46THR 47 0.0111
THR 47ASP 48 0.1039
ASP 48GLY 49 0.4276
GLY 49SER 50 -0.0644
SER 50THR 51 -0.1690
THR 51ASP 52 -0.0208
ASP 52TYR 53 -0.1216
TYR 53GLY 54 0.0954
GLY 54ILE 55 0.1235
ILE 55LEU 56 -0.2336
LEU 56GLN 57 -0.1156
GLN 57ILE 58 0.1807
ILE 58ASN 59 0.0199
ASN 59SER 60 0.0526
SER 60ARG 61 -0.0397
ARG 61TRP 62 0.1211
TRP 62TRP 63 0.0959
TRP 63CYS 64 -0.0544
CYS 64ASN 65 0.0641
ASN 65ASP 66 -0.2415
ASP 66GLY 67 0.4281
GLY 67ARG 68 0.0033
ARG 68THR 69 -0.2252
THR 69PRO 70 0.1676
PRO 70GLY 71 -0.1147
GLY 71SER 72 0.4435
SER 72ARG 73 -0.0733
ARG 73ASN 74 -0.1674
ASN 74LEU 75 0.0080
LEU 75CYS 76 0.1365
CYS 76ASN 77 0.1385
ASN 77ILE 78 -0.1162
ILE 78PRO 79 0.0794
PRO 79CYS 80 -0.1843
CYS 80SER 81 0.0010
SER 81ALA 82 0.0770
ALA 82LEU 83 -0.0107
LEU 83LEU 84 0.0141
LEU 84SER 85 -0.2135
SER 85SER 86 0.0347
SER 86ASP 87 0.0331
ASP 87ILE 88 -0.0712
ILE 88THR 89 -0.0229
THR 89ALA 90 0.1362
ALA 90SER 91 0.0179
SER 91VAL 92 0.0276
VAL 92ASN 93 0.1069
ASN 93CYS 94 0.0072
CYS 94ALA 95 0.2701
ALA 95LYS 96 -0.0818
LYS 96LYS 97 0.2225
LYS 97ILE 98 0.1887
ILE 98VAL 99 0.0570
VAL 99SER 100 0.0318
SER 100ASP 101 0.0092
ASP 101GLY 102 0.0424
GLY 102ASN 103 0.1198
ASN 103GLY 104 0.0824
GLY 104MET 105 0.0283
MET 105ASN 106 -0.0379
ASN 106ALA 107 0.1902
ALA 107TRP 108 -0.1462
TRP 108VAL 109 0.1595
VAL 109ALA 110 0.0402
ALA 110TRP 111 -0.0291
TRP 111ARG 112 -0.1126
ARG 112ASN 113 0.1540
ASN 113ARG 114 0.0084
ARG 114CYS 115 0.1436
CYS 115LYS 116 -0.1479
LYS 116GLY 117 0.1114
GLY 117THR 118 0.0021
THR 118ASP 119 0.1814
ASP 119VAL 120 0.0290
VAL 120GLN 121 0.1538
GLN 121ALA 122 -0.0716
ALA 122TRP 123 0.0329
TRP 123ILE 124 0.1106
ILE 124ARG 125 -0.0766
ARG 125GLY 126 0.1967
GLY 126CYS 127 -0.1213
CYS 127ARG 128 -0.1705
ARG 128LEU 129 0.4306

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.