This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0142
VAL 2
PHE 3
0.0244
PHE 3
GLY 4
-0.0009
GLY 4
ARG 5
-0.0493
ARG 5
CYS 6
-0.0126
CYS 6
GLU 7
-0.2584
GLU 7
LEU 8
-0.0393
LEU 8
ALA 9
0.0394
ALA 9
ALA 10
-0.0316
ALA 10
ALA 11
-0.0792
ALA 11
MET 12
-0.0313
MET 12
LYS 13
0.1721
LYS 13
ARG 14
0.0112
ARG 14
HIS 15
0.0195
HIS 15
GLY 16
-0.0270
GLY 16
LEU 17
0.0232
LEU 17
ASP 18
0.0347
ASP 18
ASN 19
-0.0618
ASN 19
TYR 20
0.0112
TYR 20
ARG 21
-0.0569
ARG 21
GLY 22
-0.0144
GLY 22
TYR 23
0.0546
TYR 23
SER 24
-0.1245
SER 24
LEU 25
-0.0169
LEU 25
GLY 26
-0.0171
GLY 26
ASN 27
0.0119
ASN 27
TRP 28
-0.0030
TRP 28
VAL 29
-0.0268
VAL 29
CYS 30
-0.0265
CYS 30
ALA 31
0.0833
ALA 31
ALA 32
-0.0487
ALA 32
LYS 33
-0.0124
LYS 33
PHE 34
-0.0112
PHE 34
GLU 35
0.1081
GLU 35
SER 36
-0.0526
SER 36
ASN 37
0.0579
ASN 37
PHE 38
-0.0155
PHE 38
ASN 39
0.1093
ASN 39
THR 40
0.0509
THR 40
GLN 41
-0.0243
GLN 41
ALA 42
-0.0464
ALA 42
THR 43
0.2090
THR 43
ASN 44
0.0344
ASN 44
ARG 45
0.1613
ARG 45
ASN 46
0.1441
ASN 46
THR 47
-0.2057
THR 47
ASP 48
-0.0318
ASP 48
GLY 49
-0.3613
GLY 49
SER 50
0.0754
SER 50
THR 51
0.0937
THR 51
ASP 52
0.0894
ASP 52
TYR 53
-0.0475
TYR 53
GLY 54
0.0866
GLY 54
ILE 55
0.1360
ILE 55
LEU 56
-0.0380
LEU 56
GLN 57
0.1344
GLN 57
ILE 58
-0.0745
ILE 58
ASN 59
0.0910
ASN 59
SER 60
-0.0118
SER 60
ARG 61
0.0445
ARG 61
TRP 62
-0.0109
TRP 62
TRP 63
0.0758
TRP 63
CYS 64
0.0216
CYS 64
ASN 65
-0.0037
ASN 65
ASP 66
0.1029
ASP 66
GLY 67
-0.1663
GLY 67
ARG 68
0.0677
ARG 68
THR 69
0.1007
THR 69
PRO 70
-0.1009
PRO 70
GLY 71
0.1332
GLY 71
SER 72
-0.1521
SER 72
ARG 73
0.0863
ARG 73
ASN 74
0.1448
ASN 74
LEU 75
0.0284
LEU 75
CYS 76
0.1359
CYS 76
ASN 77
-0.1150
ASN 77
ILE 78
0.2257
ILE 78
PRO 79
-0.0859
PRO 79
CYS 80
0.0419
CYS 80
SER 81
-0.0109
SER 81
ALA 82
-0.1023
ALA 82
LEU 83
0.0174
LEU 83
LEU 84
0.0224
LEU 84
SER 85
-0.0419
SER 85
SER 86
0.1638
SER 86
ASP 87
-0.0419
ASP 87
ILE 88
-0.0396
ILE 88
THR 89
-0.0135
THR 89
ALA 90
0.1010
ALA 90
SER 91
-0.0201
SER 91
VAL 92
0.0062
VAL 92
ASN 93
0.0618
ASN 93
CYS 94
0.0558
CYS 94
ALA 95
-0.0468
ALA 95
LYS 96
0.0080
LYS 96
LYS 97
-0.0048
LYS 97
ILE 98
-0.1711
ILE 98
VAL 99
0.0198
VAL 99
SER 100
0.0351
SER 100
ASP 101
-0.0073
ASP 101
GLY 102
0.0417
GLY 102
ASN 103
0.0517
ASN 103
GLY 104
-0.1097
GLY 104
MET 105
-0.0084
MET 105
ASN 106
-0.0133
ASN 106
ALA 107
-0.1407
ALA 107
TRP 108
0.0839
TRP 108
VAL 109
-0.1788
VAL 109
ALA 110
0.0548
ALA 110
TRP 111
0.0208
TRP 111
ARG 112
0.0227
ARG 112
ASN 113
-0.0661
ASN 113
ARG 114
0.0803
ARG 114
CYS 115
0.0296
CYS 115
LYS 116
-0.0461
LYS 116
GLY 117
0.0085
GLY 117
THR 118
0.0363
THR 118
ASP 119
0.2807
ASP 119
VAL 120
-0.1292
VAL 120
GLN 121
0.1726
GLN 121
ALA 122
-0.0705
ALA 122
TRP 123
0.0083
TRP 123
ILE 124
0.1292
ILE 124
ARG 125
-0.0994
ARG 125
GLY 126
0.4097
GLY 126
CYS 127
-0.4787
CYS 127
ARG 128
-0.0976
ARG 128
LEU 129
0.2434
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.