This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.1098
VAL 2
PHE 3
0.1701
PHE 3
GLY 4
-0.0905
GLY 4
ARG 5
-0.2078
ARG 5
CYS 6
-0.1621
CYS 6
GLU 7
0.0284
GLU 7
LEU 8
-0.0268
LEU 8
ALA 9
0.1576
ALA 9
ALA 10
-0.0772
ALA 10
ALA 11
0.1730
ALA 11
MET 12
-0.0171
MET 12
LYS 13
0.0018
LYS 13
ARG 14
0.1520
ARG 14
HIS 15
0.0740
HIS 15
GLY 16
-0.0140
GLY 16
LEU 17
-0.0057
LEU 17
ASP 18
-0.0076
ASP 18
ASN 19
-0.0643
ASN 19
TYR 20
-0.1533
TYR 20
ARG 21
0.0448
ARG 21
GLY 22
-0.0051
GLY 22
TYR 23
0.0831
TYR 23
SER 24
0.1127
SER 24
LEU 25
-0.0635
LEU 25
GLY 26
0.1673
GLY 26
ASN 27
-0.1930
ASN 27
TRP 28
0.2126
TRP 28
VAL 29
-0.0140
VAL 29
CYS 30
-0.1077
CYS 30
ALA 31
-0.1427
ALA 31
ALA 32
-0.0822
ALA 32
LYS 33
0.1016
LYS 33
PHE 34
-0.0731
PHE 34
GLU 35
-0.0869
GLU 35
SER 36
-0.2842
SER 36
ASN 37
0.0780
ASN 37
PHE 38
0.0460
PHE 38
ASN 39
-0.1044
ASN 39
THR 40
0.0231
THR 40
GLN 41
-0.0745
GLN 41
ALA 42
-0.2036
ALA 42
THR 43
-0.2249
THR 43
ASN 44
0.0596
ASN 44
ARG 45
-0.4148
ARG 45
ASN 46
-0.1683
ASN 46
THR 47
-0.3281
THR 47
ASP 48
0.0231
ASP 48
GLY 49
-0.1208
GLY 49
SER 50
-0.0499
SER 50
THR 51
-0.1387
THR 51
ASP 52
-0.0805
ASP 52
TYR 53
0.0388
TYR 53
GLY 54
-0.1642
GLY 54
ILE 55
-0.0349
ILE 55
LEU 56
-0.0752
LEU 56
GLN 57
-0.3097
GLN 57
ILE 58
0.0286
ILE 58
ASN 59
-0.0740
ASN 59
SER 60
-0.0189
SER 60
ARG 61
0.0979
ARG 61
TRP 62
-0.0891
TRP 62
TRP 63
0.1791
TRP 63
CYS 64
-0.1827
CYS 64
ASN 65
-0.1054
ASN 65
ASP 66
-0.0851
ASP 66
GLY 67
0.0196
GLY 67
ARG 68
0.0559
ARG 68
THR 69
0.2216
THR 69
PRO 70
-0.2282
PRO 70
GLY 71
0.2869
GLY 71
SER 72
-0.1082
SER 72
ARG 73
0.0195
ARG 73
ASN 74
0.5413
ASN 74
LEU 75
-0.1531
LEU 75
CYS 76
0.1949
CYS 76
ASN 77
-0.0227
ASN 77
ILE 78
0.3045
ILE 78
PRO 79
-0.1589
PRO 79
CYS 80
0.1452
CYS 80
SER 81
-0.0326
SER 81
ALA 82
-0.2580
ALA 82
LEU 83
0.0768
LEU 83
LEU 84
0.1429
LEU 84
SER 85
-0.2904
SER 85
SER 86
0.1670
SER 86
ASP 87
0.0664
ASP 87
ILE 88
-0.0225
ILE 88
THR 89
-0.0125
THR 89
ALA 90
-0.0223
ALA 90
SER 91
0.1192
SER 91
VAL 92
-0.2302
VAL 92
ASN 93
0.1249
ASN 93
CYS 94
-0.0335
CYS 94
ALA 95
0.0779
ALA 95
LYS 96
-0.2225
LYS 96
LYS 97
-0.0952
LYS 97
ILE 98
0.1415
ILE 98
VAL 99
-0.3877
VAL 99
SER 100
-0.0049
SER 100
ASP 101
-0.1569
ASP 101
GLY 102
-0.3390
GLY 102
ASN 103
-0.1607
ASN 103
GLY 104
0.2045
GLY 104
MET 105
-0.1042
MET 105
ASN 106
-0.0138
ASN 106
ALA 107
0.3480
ALA 107
TRP 108
-0.3444
TRP 108
VAL 109
0.3012
VAL 109
ALA 110
-0.1889
ALA 110
TRP 111
0.1114
TRP 111
ARG 112
-0.1357
ARG 112
ASN 113
0.2092
ASN 113
ARG 114
-0.3032
ARG 114
CYS 115
0.1413
CYS 115
LYS 116
-0.1524
LYS 116
GLY 117
0.1221
GLY 117
THR 118
-0.1195
THR 118
ASP 119
-0.5191
ASP 119
VAL 120
0.1897
VAL 120
GLN 121
-0.6241
GLN 121
ALA 122
0.1614
ALA 122
TRP 123
-0.1732
TRP 123
ILE 124
-0.1803
ILE 124
ARG 125
0.1467
ARG 125
GLY 126
-0.1422
GLY 126
CYS 127
0.1252
CYS 127
ARG 128
-0.4883
ARG 128
LEU 129
0.2982
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.