CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 18  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.1098
VAL 2PHE 3 0.1701
PHE 3GLY 4 -0.0905
GLY 4ARG 5 -0.2078
ARG 5CYS 6 -0.1621
CYS 6GLU 7 0.0284
GLU 7LEU 8 -0.0268
LEU 8ALA 9 0.1576
ALA 9ALA 10 -0.0772
ALA 10ALA 11 0.1730
ALA 11MET 12 -0.0171
MET 12LYS 13 0.0018
LYS 13ARG 14 0.1520
ARG 14HIS 15 0.0740
HIS 15GLY 16 -0.0140
GLY 16LEU 17 -0.0057
LEU 17ASP 18 -0.0076
ASP 18ASN 19 -0.0643
ASN 19TYR 20 -0.1533
TYR 20ARG 21 0.0448
ARG 21GLY 22 -0.0051
GLY 22TYR 23 0.0831
TYR 23SER 24 0.1127
SER 24LEU 25 -0.0635
LEU 25GLY 26 0.1673
GLY 26ASN 27 -0.1930
ASN 27TRP 28 0.2126
TRP 28VAL 29 -0.0140
VAL 29CYS 30 -0.1077
CYS 30ALA 31 -0.1427
ALA 31ALA 32 -0.0822
ALA 32LYS 33 0.1016
LYS 33PHE 34 -0.0731
PHE 34GLU 35 -0.0869
GLU 35SER 36 -0.2842
SER 36ASN 37 0.0780
ASN 37PHE 38 0.0460
PHE 38ASN 39 -0.1044
ASN 39THR 40 0.0231
THR 40GLN 41 -0.0745
GLN 41ALA 42 -0.2036
ALA 42THR 43 -0.2249
THR 43ASN 44 0.0596
ASN 44ARG 45 -0.4148
ARG 45ASN 46 -0.1683
ASN 46THR 47 -0.3281
THR 47ASP 48 0.0231
ASP 48GLY 49 -0.1208
GLY 49SER 50 -0.0499
SER 50THR 51 -0.1387
THR 51ASP 52 -0.0805
ASP 52TYR 53 0.0388
TYR 53GLY 54 -0.1642
GLY 54ILE 55 -0.0349
ILE 55LEU 56 -0.0752
LEU 56GLN 57 -0.3097
GLN 57ILE 58 0.0286
ILE 58ASN 59 -0.0740
ASN 59SER 60 -0.0189
SER 60ARG 61 0.0979
ARG 61TRP 62 -0.0891
TRP 62TRP 63 0.1791
TRP 63CYS 64 -0.1827
CYS 64ASN 65 -0.1054
ASN 65ASP 66 -0.0851
ASP 66GLY 67 0.0196
GLY 67ARG 68 0.0559
ARG 68THR 69 0.2216
THR 69PRO 70 -0.2282
PRO 70GLY 71 0.2869
GLY 71SER 72 -0.1082
SER 72ARG 73 0.0195
ARG 73ASN 74 0.5413
ASN 74LEU 75 -0.1531
LEU 75CYS 76 0.1949
CYS 76ASN 77 -0.0227
ASN 77ILE 78 0.3045
ILE 78PRO 79 -0.1589
PRO 79CYS 80 0.1452
CYS 80SER 81 -0.0326
SER 81ALA 82 -0.2580
ALA 82LEU 83 0.0768
LEU 83LEU 84 0.1429
LEU 84SER 85 -0.2904
SER 85SER 86 0.1670
SER 86ASP 87 0.0664
ASP 87ILE 88 -0.0225
ILE 88THR 89 -0.0125
THR 89ALA 90 -0.0223
ALA 90SER 91 0.1192
SER 91VAL 92 -0.2302
VAL 92ASN 93 0.1249
ASN 93CYS 94 -0.0335
CYS 94ALA 95 0.0779
ALA 95LYS 96 -0.2225
LYS 96LYS 97 -0.0952
LYS 97ILE 98 0.1415
ILE 98VAL 99 -0.3877
VAL 99SER 100 -0.0049
SER 100ASP 101 -0.1569
ASP 101GLY 102 -0.3390
GLY 102ASN 103 -0.1607
ASN 103GLY 104 0.2045
GLY 104MET 105 -0.1042
MET 105ASN 106 -0.0138
ASN 106ALA 107 0.3480
ALA 107TRP 108 -0.3444
TRP 108VAL 109 0.3012
VAL 109ALA 110 -0.1889
ALA 110TRP 111 0.1114
TRP 111ARG 112 -0.1357
ARG 112ASN 113 0.2092
ASN 113ARG 114 -0.3032
ARG 114CYS 115 0.1413
CYS 115LYS 116 -0.1524
LYS 116GLY 117 0.1221
GLY 117THR 118 -0.1195
THR 118ASP 119 -0.5191
ASP 119VAL 120 0.1897
VAL 120GLN 121 -0.6241
GLN 121ALA 122 0.1614
ALA 122TRP 123 -0.1732
TRP 123ILE 124 -0.1803
ILE 124ARG 125 0.1467
ARG 125GLY 126 -0.1422
GLY 126CYS 127 0.1252
CYS 127ARG 128 -0.4883
ARG 128LEU 129 0.2982

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.