CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 19  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0716
VAL 2PHE 3 0.0936
PHE 3GLY 4 -0.1448
GLY 4ARG 5 -0.4214
ARG 5CYS 6 0.1476
CYS 6GLU 7 -0.0996
GLU 7LEU 8 0.0888
LEU 8ALA 9 0.0226
ALA 9ALA 10 0.1063
ALA 10ALA 11 0.0319
ALA 11MET 12 0.0722
MET 12LYS 13 0.0095
LYS 13ARG 14 0.1201
ARG 14HIS 15 -0.0960
HIS 15GLY 16 0.2377
GLY 16LEU 17 -0.0392
LEU 17ASP 18 0.0871
ASP 18ASN 19 0.1141
ASN 19TYR 20 0.1406
TYR 20ARG 21 0.0849
ARG 21GLY 22 0.0752
GLY 22TYR 23 -0.1693
TYR 23SER 24 0.4689
SER 24LEU 25 -0.0297
LEU 25GLY 26 -0.0242
GLY 26ASN 27 0.3500
ASN 27TRP 28 -0.1034
TRP 28VAL 29 -0.0672
VAL 29CYS 30 0.1760
CYS 30ALA 31 0.0167
ALA 31ALA 32 -0.1692
ALA 32LYS 33 0.0356
LYS 33PHE 34 -0.0366
PHE 34GLU 35 0.1432
GLU 35SER 36 -0.5809
SER 36ASN 37 0.2810
ASN 37PHE 38 0.0511
PHE 38ASN 39 -0.0949
ASN 39THR 40 0.0204
THR 40GLN 41 -0.0224
GLN 41ALA 42 -0.4282
ALA 42THR 43 0.1390
THR 43ASN 44 -0.5345
ASN 44ARG 45 0.3084
ARG 45ASN 46 0.2241
ASN 46THR 47 -0.2586
THR 47ASP 48 0.1000
ASP 48GLY 49 -0.1938
GLY 49SER 50 0.0324
SER 50THR 51 0.0612
THR 51ASP 52 0.2613
ASP 52TYR 53 -0.4323
TYR 53GLY 54 0.2317
GLY 54ILE 55 0.1834
ILE 55LEU 56 -0.1241
LEU 56GLN 57 0.3772
GLN 57ILE 58 -0.0020
ILE 58ASN 59 -0.0354
ASN 59SER 60 0.0307
SER 60ARG 61 0.0311
ARG 61TRP 62 -0.0021
TRP 62TRP 63 0.0319
TRP 63CYS 64 0.0516
CYS 64ASN 65 -0.0107
ASN 65ASP 66 0.0052
ASP 66GLY 67 0.1230
GLY 67ARG 68 0.0333
ARG 68THR 69 -0.1136
THR 69PRO 70 0.0701
PRO 70GLY 71 -0.1649
GLY 71SER 72 0.1937
SER 72ARG 73 -0.0664
ARG 73ASN 74 -0.0081
ASN 74LEU 75 0.0038
LEU 75CYS 76 0.1626
CYS 76ASN 77 -0.1565
ASN 77ILE 78 0.2106
ILE 78PRO 79 -0.0459
PRO 79CYS 80 -0.0099
CYS 80SER 81 -0.0260
SER 81ALA 82 -0.2025
ALA 82LEU 83 -0.1045
LEU 83LEU 84 0.2808
LEU 84SER 85 -0.4043
SER 85SER 86 -0.0780
SER 86ASP 87 0.2867
ASP 87ILE 88 -0.0648
ILE 88THR 89 0.0447
THR 89ALA 90 -0.2445
ALA 90SER 91 -0.1641
SER 91VAL 92 0.1438
VAL 92ASN 93 -0.0511
ASN 93CYS 94 -0.0441
CYS 94ALA 95 -0.0832
ALA 95LYS 96 0.1013
LYS 96LYS 97 0.0892
LYS 97ILE 98 -0.3051
ILE 98VAL 99 0.2729
VAL 99SER 100 -0.0881
SER 100ASP 101 0.1500
ASP 101GLY 102 0.0710
GLY 102ASN 103 -0.0172
ASN 103GLY 104 0.2886
GLY 104MET 105 0.0818
MET 105ASN 106 0.0783
ASN 106ALA 107 -0.3412
ALA 107TRP 108 0.0297
TRP 108VAL 109 -0.2589
VAL 109ALA 110 0.1317
ALA 110TRP 111 0.0053
TRP 111ARG 112 0.1495
ARG 112ASN 113 -0.2025
ASN 113ARG 114 0.1780
ARG 114CYS 115 0.0804
CYS 115LYS 116 0.0705
LYS 116GLY 117 -0.1039
GLY 117THR 118 0.2239
THR 118ASP 119 0.0737
ASP 119VAL 120 0.0147
VAL 120GLN 121 0.1836
GLN 121ALA 122 -0.1253
ALA 122TRP 123 -0.3333
TRP 123ILE 124 0.3223
ILE 124ARG 125 0.0010
ARG 125GLY 126 0.0138
GLY 126CYS 127 0.1719
CYS 127ARG 128 -0.1887
ARG 128LEU 129 -0.0124

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.