This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0716
VAL 2
PHE 3
0.0936
PHE 3
GLY 4
-0.1448
GLY 4
ARG 5
-0.4214
ARG 5
CYS 6
0.1476
CYS 6
GLU 7
-0.0996
GLU 7
LEU 8
0.0888
LEU 8
ALA 9
0.0226
ALA 9
ALA 10
0.1063
ALA 10
ALA 11
0.0319
ALA 11
MET 12
0.0722
MET 12
LYS 13
0.0095
LYS 13
ARG 14
0.1201
ARG 14
HIS 15
-0.0960
HIS 15
GLY 16
0.2377
GLY 16
LEU 17
-0.0392
LEU 17
ASP 18
0.0871
ASP 18
ASN 19
0.1141
ASN 19
TYR 20
0.1406
TYR 20
ARG 21
0.0849
ARG 21
GLY 22
0.0752
GLY 22
TYR 23
-0.1693
TYR 23
SER 24
0.4689
SER 24
LEU 25
-0.0297
LEU 25
GLY 26
-0.0242
GLY 26
ASN 27
0.3500
ASN 27
TRP 28
-0.1034
TRP 28
VAL 29
-0.0672
VAL 29
CYS 30
0.1760
CYS 30
ALA 31
0.0167
ALA 31
ALA 32
-0.1692
ALA 32
LYS 33
0.0356
LYS 33
PHE 34
-0.0366
PHE 34
GLU 35
0.1432
GLU 35
SER 36
-0.5809
SER 36
ASN 37
0.2810
ASN 37
PHE 38
0.0511
PHE 38
ASN 39
-0.0949
ASN 39
THR 40
0.0204
THR 40
GLN 41
-0.0224
GLN 41
ALA 42
-0.4282
ALA 42
THR 43
0.1390
THR 43
ASN 44
-0.5345
ASN 44
ARG 45
0.3084
ARG 45
ASN 46
0.2241
ASN 46
THR 47
-0.2586
THR 47
ASP 48
0.1000
ASP 48
GLY 49
-0.1938
GLY 49
SER 50
0.0324
SER 50
THR 51
0.0612
THR 51
ASP 52
0.2613
ASP 52
TYR 53
-0.4323
TYR 53
GLY 54
0.2317
GLY 54
ILE 55
0.1834
ILE 55
LEU 56
-0.1241
LEU 56
GLN 57
0.3772
GLN 57
ILE 58
-0.0020
ILE 58
ASN 59
-0.0354
ASN 59
SER 60
0.0307
SER 60
ARG 61
0.0311
ARG 61
TRP 62
-0.0021
TRP 62
TRP 63
0.0319
TRP 63
CYS 64
0.0516
CYS 64
ASN 65
-0.0107
ASN 65
ASP 66
0.0052
ASP 66
GLY 67
0.1230
GLY 67
ARG 68
0.0333
ARG 68
THR 69
-0.1136
THR 69
PRO 70
0.0701
PRO 70
GLY 71
-0.1649
GLY 71
SER 72
0.1937
SER 72
ARG 73
-0.0664
ARG 73
ASN 74
-0.0081
ASN 74
LEU 75
0.0038
LEU 75
CYS 76
0.1626
CYS 76
ASN 77
-0.1565
ASN 77
ILE 78
0.2106
ILE 78
PRO 79
-0.0459
PRO 79
CYS 80
-0.0099
CYS 80
SER 81
-0.0260
SER 81
ALA 82
-0.2025
ALA 82
LEU 83
-0.1045
LEU 83
LEU 84
0.2808
LEU 84
SER 85
-0.4043
SER 85
SER 86
-0.0780
SER 86
ASP 87
0.2867
ASP 87
ILE 88
-0.0648
ILE 88
THR 89
0.0447
THR 89
ALA 90
-0.2445
ALA 90
SER 91
-0.1641
SER 91
VAL 92
0.1438
VAL 92
ASN 93
-0.0511
ASN 93
CYS 94
-0.0441
CYS 94
ALA 95
-0.0832
ALA 95
LYS 96
0.1013
LYS 96
LYS 97
0.0892
LYS 97
ILE 98
-0.3051
ILE 98
VAL 99
0.2729
VAL 99
SER 100
-0.0881
SER 100
ASP 101
0.1500
ASP 101
GLY 102
0.0710
GLY 102
ASN 103
-0.0172
ASN 103
GLY 104
0.2886
GLY 104
MET 105
0.0818
MET 105
ASN 106
0.0783
ASN 106
ALA 107
-0.3412
ALA 107
TRP 108
0.0297
TRP 108
VAL 109
-0.2589
VAL 109
ALA 110
0.1317
ALA 110
TRP 111
0.0053
TRP 111
ARG 112
0.1495
ARG 112
ASN 113
-0.2025
ASN 113
ARG 114
0.1780
ARG 114
CYS 115
0.0804
CYS 115
LYS 116
0.0705
LYS 116
GLY 117
-0.1039
GLY 117
THR 118
0.2239
THR 118
ASP 119
0.0737
ASP 119
VAL 120
0.0147
VAL 120
GLN 121
0.1836
GLN 121
ALA 122
-0.1253
ALA 122
TRP 123
-0.3333
TRP 123
ILE 124
0.3223
ILE 124
ARG 125
0.0010
ARG 125
GLY 126
0.0138
GLY 126
CYS 127
0.1719
CYS 127
ARG 128
-0.1887
ARG 128
LEU 129
-0.0124
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.