This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0206
VAL 2
PHE 3
0.1512
PHE 3
GLY 4
-0.0098
GLY 4
ARG 5
-0.1237
ARG 5
CYS 6
0.2099
CYS 6
GLU 7
-0.2466
GLU 7
LEU 8
-0.0245
LEU 8
ALA 9
-0.0300
ALA 9
ALA 10
-0.1023
ALA 10
ALA 11
-0.1893
ALA 11
MET 12
0.0482
MET 12
LYS 13
-0.0235
LYS 13
ARG 14
-0.1330
ARG 14
HIS 15
0.0042
HIS 15
GLY 16
0.2555
GLY 16
LEU 17
-0.1087
LEU 17
ASP 18
0.1373
ASP 18
ASN 19
0.2783
ASN 19
TYR 20
0.2272
TYR 20
ARG 21
0.1007
ARG 21
GLY 22
0.1393
GLY 22
TYR 23
-0.1716
TYR 23
SER 24
0.1893
SER 24
LEU 25
0.1054
LEU 25
GLY 26
-0.0802
GLY 26
ASN 27
0.1716
ASN 27
TRP 28
0.0608
TRP 28
VAL 29
0.0588
VAL 29
CYS 30
-0.1243
CYS 30
ALA 31
0.2794
ALA 31
ALA 32
-0.2325
ALA 32
LYS 33
0.0408
LYS 33
PHE 34
-0.1074
PHE 34
GLU 35
0.1744
GLU 35
SER 36
-0.3837
SER 36
ASN 37
-0.0304
ASN 37
PHE 38
0.0118
PHE 38
ASN 39
0.1051
ASN 39
THR 40
0.0631
THR 40
GLN 41
0.0808
GLN 41
ALA 42
-0.0280
ALA 42
THR 43
-0.1796
THR 43
ASN 44
0.2163
ASN 44
ARG 45
0.0270
ARG 45
ASN 46
-0.1619
ASN 46
THR 47
0.3941
THR 47
ASP 48
-0.2291
ASP 48
GLY 49
-0.2483
GLY 49
SER 50
0.1280
SER 50
THR 51
-0.0715
THR 51
ASP 52
0.0891
ASP 52
TYR 53
0.1691
TYR 53
GLY 54
-0.0336
GLY 54
ILE 55
0.1185
ILE 55
LEU 56
-0.2550
LEU 56
GLN 57
0.1607
GLN 57
ILE 58
-0.2625
ILE 58
ASN 59
0.0987
ASN 59
SER 60
0.0138
SER 60
ARG 61
-0.0035
ARG 61
TRP 62
0.1055
TRP 62
TRP 63
0.0918
TRP 63
CYS 64
0.0101
CYS 64
ASN 65
0.0183
ASN 65
ASP 66
0.1751
ASP 66
GLY 67
-0.1614
GLY 67
ARG 68
0.0409
ARG 68
THR 69
0.1530
THR 69
PRO 70
-0.0611
PRO 70
GLY 71
0.1920
GLY 71
SER 72
-0.0974
SER 72
ARG 73
-0.0225
ARG 73
ASN 74
0.6589
ASN 74
LEU 75
-0.0002
LEU 75
CYS 76
0.0449
CYS 76
ASN 77
0.0294
ASN 77
ILE 78
-0.0020
ILE 78
PRO 79
0.1018
PRO 79
CYS 80
-0.1135
CYS 80
SER 81
-0.0217
SER 81
ALA 82
0.1633
ALA 82
LEU 83
0.0104
LEU 83
LEU 84
-0.0786
LEU 84
SER 85
0.1008
SER 85
SER 86
-0.0891
SER 86
ASP 87
0.1140
ASP 87
ILE 88
-0.1028
ILE 88
THR 89
0.0213
THR 89
ALA 90
0.2537
ALA 90
SER 91
0.0790
SER 91
VAL 92
0.2351
VAL 92
ASN 93
0.0588
ASN 93
CYS 94
-0.0342
CYS 94
ALA 95
0.3446
ALA 95
LYS 96
0.0558
LYS 96
LYS 97
0.0586
LYS 97
ILE 98
0.2567
ILE 98
VAL 99
0.1021
VAL 99
SER 100
-0.0081
SER 100
ASP 101
-0.0771
ASP 101
GLY 102
-0.1675
GLY 102
ASN 103
0.0206
ASN 103
GLY 104
0.1498
GLY 104
MET 105
0.0624
MET 105
ASN 106
-0.1081
ASN 106
ALA 107
0.3280
ALA 107
TRP 108
-0.3512
TRP 108
VAL 109
0.0892
VAL 109
ALA 110
-0.0076
ALA 110
TRP 111
-0.1007
TRP 111
ARG 112
-0.0942
ARG 112
ASN 113
0.0011
ASN 113
ARG 114
0.0879
ARG 114
CYS 115
0.1039
CYS 115
LYS 116
-0.1411
LYS 116
GLY 117
0.1505
GLY 117
THR 118
0.0213
THR 118
ASP 119
0.3365
ASP 119
VAL 120
-0.2195
VAL 120
GLN 121
0.4390
GLN 121
ALA 122
-0.1138
ALA 122
TRP 123
0.1206
TRP 123
ILE 124
0.2218
ILE 124
ARG 125
-0.0862
ARG 125
GLY 126
0.1018
GLY 126
CYS 127
0.0470
CYS 127
ARG 128
0.1558
ARG 128
LEU 129
-0.2499
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.