CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 21  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.0451
VAL 2PHE 3 0.0996
PHE 3GLY 4 -0.0406
GLY 4ARG 5 -0.4169
ARG 5CYS 6 0.3742
CYS 6GLU 7 -0.5724
GLU 7LEU 8 0.1510
LEU 8ALA 9 -0.1738
ALA 9ALA 10 -0.1334
ALA 10ALA 11 -0.2195
ALA 11MET 12 0.1619
MET 12LYS 13 -0.1440
LYS 13ARG 14 -0.1868
ARG 14HIS 15 0.2106
HIS 15GLY 16 -0.3381
GLY 16LEU 17 -0.0932
LEU 17ASP 18 -0.1836
ASP 18ASN 19 0.1299
ASN 19TYR 20 -0.2668
TYR 20ARG 21 0.1714
ARG 21GLY 22 0.0429
GLY 22TYR 23 0.0799
TYR 23SER 24 0.3137
SER 24LEU 25 -0.0240
LEU 25GLY 26 -0.0678
GLY 26ASN 27 0.1222
ASN 27TRP 28 -0.1884
TRP 28VAL 29 0.2722
VAL 29CYS 30 -0.1236
CYS 30ALA 31 -0.0999
ALA 31ALA 32 -0.0153
ALA 32LYS 33 -0.0470
LYS 33PHE 34 0.0316
PHE 34GLU 35 -0.3827
GLU 35SER 36 0.0899
SER 36ASN 37 -0.1709
ASN 37PHE 38 0.0681
PHE 38ASN 39 -0.1347
ASN 39THR 40 -0.0777
THR 40GLN 41 -0.0278
GLN 41ALA 42 0.1474
ALA 42THR 43 0.1659
THR 43ASN 44 0.2839
ASN 44ARG 45 0.3517
ARG 45ASN 46 0.0238
ASN 46THR 47 0.5219
THR 47ASP 48 -0.2529
ASP 48GLY 49 0.3929
GLY 49SER 50 0.0117
SER 50THR 51 0.1968
THR 51ASP 52 -0.1685
ASP 52TYR 53 0.3536
TYR 53GLY 54 0.1122
GLY 54ILE 55 -0.0652
ILE 55LEU 56 0.0437
LEU 56GLN 57 0.2118
GLN 57ILE 58 -0.2512
ILE 58ASN 59 0.2515
ASN 59SER 60 -0.1411
SER 60ARG 61 0.2372
ARG 61TRP 62 -0.2359
TRP 62TRP 63 0.1686
TRP 63CYS 64 -0.2751
CYS 64ASN 65 -0.1413
ASN 65ASP 66 -0.1043
ASP 66GLY 67 -0.1469
GLY 67ARG 68 -0.0803
ARG 68THR 69 -0.2057
THR 69PRO 70 0.3316
PRO 70GLY 71 -0.7915
GLY 71SER 72 0.2865
SER 72ARG 73 -0.2781
ARG 73ASN 74 -0.2254
ASN 74LEU 75 -0.0180
LEU 75CYS 76 0.1302
CYS 76ASN 77 -0.1926
ASN 77ILE 78 0.2333
ILE 78PRO 79 -0.1140
PRO 79CYS 80 -0.0367
CYS 80SER 81 0.0639
SER 81ALA 82 -0.0079
ALA 82LEU 83 -0.1149
LEU 83LEU 84 -0.0190
LEU 84SER 85 0.2695
SER 85SER 86 0.3783
SER 86ASP 87 0.0435
ASP 87ILE 88 -0.1347
ILE 88THR 89 0.1140
THR 89ALA 90 0.1839
ALA 90SER 91 -0.1122
SER 91VAL 92 -0.1921
VAL 92ASN 93 0.1235
ASN 93CYS 94 0.1721
CYS 94ALA 95 -0.2893
ALA 95LYS 96 -0.1023
LYS 96LYS 97 0.1510
LYS 97ILE 98 -0.2488
ILE 98VAL 99 -0.2298
VAL 99SER 100 -0.1626
SER 100ASP 101 0.1421
ASP 101GLY 102 -0.4396
GLY 102ASN 103 -0.2575
ASN 103GLY 104 0.3886
GLY 104MET 105 0.1171
MET 105ASN 106 0.0304
ASN 106ALA 107 0.1692
ALA 107TRP 108 -0.1941
TRP 108VAL 109 -0.2276
VAL 109ALA 110 -0.0463
ALA 110TRP 111 0.0907
TRP 111ARG 112 0.0570
ARG 112ASN 113 -0.1949
ASN 113ARG 114 -0.0411
ARG 114CYS 115 0.2824
CYS 115LYS 116 -0.2629
LYS 116GLY 117 0.0380
GLY 117THR 118 -0.1831
THR 118ASP 119 0.1397
ASP 119VAL 120 -0.2548
VAL 120GLN 121 0.1703
GLN 121ALA 122 0.0575
ALA 122TRP 123 -0.1750
TRP 123ILE 124 0.1584
ILE 124ARG 125 0.1667
ARG 125GLY 126 0.1635
GLY 126CYS 127 -0.1518
CYS 127ARG 128 0.4773
ARG 128LEU 129 -0.1489

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.