CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 22  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0848
VAL 2PHE 3 0.3264
PHE 3GLY 4 0.0145
GLY 4ARG 5 0.0941
ARG 5CYS 6 -0.1380
CYS 6GLU 7 0.1811
GLU 7LEU 8 -0.1391
LEU 8ALA 9 0.2042
ALA 9ALA 10 -0.1201
ALA 10ALA 11 0.1834
ALA 11MET 12 0.0217
MET 12LYS 13 -0.1161
LYS 13ARG 14 0.1095
ARG 14HIS 15 0.1819
HIS 15GLY 16 0.1000
GLY 16LEU 17 0.0272
LEU 17ASP 18 -0.0557
ASP 18ASN 19 -0.0253
ASN 19TYR 20 -0.1032
TYR 20ARG 21 0.1598
ARG 21GLY 22 -0.0563
GLY 22TYR 23 0.0589
TYR 23SER 24 0.2339
SER 24LEU 25 -0.0801
LEU 25GLY 26 0.0804
GLY 26ASN 27 -0.1933
ASN 27TRP 28 0.1411
TRP 28VAL 29 -0.3220
VAL 29CYS 30 -0.1951
CYS 30ALA 31 -0.0968
ALA 31ALA 32 -0.2555
ALA 32LYS 33 0.0275
LYS 33PHE 34 -0.5195
PHE 34GLU 35 0.2920
GLU 35SER 36 -0.7761
SER 36ASN 37 -0.0374
ASN 37PHE 38 -0.1150
PHE 38ASN 39 0.2124
ASN 39THR 40 -0.0409
THR 40GLN 41 0.2305
GLN 41ALA 42 -0.2099
ALA 42THR 43 -0.3194
THR 43ASN 44 -0.2185
ASN 44ARG 45 0.1817
ARG 45ASN 46 -0.0339
ASN 46THR 47 0.2788
THR 47ASP 48 -0.0469
ASP 48GLY 49 -0.0648
GLY 49SER 50 0.0526
SER 50THR 51 -0.1374
THR 51ASP 52 0.1760
ASP 52TYR 53 0.0177
TYR 53GLY 54 -0.0301
GLY 54ILE 55 0.0613
ILE 55LEU 56 -0.1573
LEU 56GLN 57 0.5029
GLN 57ILE 58 -0.4798
ILE 58ASN 59 0.1233
ASN 59SER 60 0.0869
SER 60ARG 61 -0.1778
ARG 61TRP 62 0.1101
TRP 62TRP 63 -0.2006
TRP 63CYS 64 0.3549
CYS 64ASN 65 0.0992
ASN 65ASP 66 0.3206
ASP 66GLY 67 -0.2771
GLY 67ARG 68 0.0911
ARG 68THR 69 -0.1117
THR 69PRO 70 0.0694
PRO 70GLY 71 -0.1384
GLY 71SER 72 0.0089
SER 72ARG 73 0.0684
ARG 73ASN 74 -0.1300
ASN 74LEU 75 0.2254
LEU 75CYS 76 -0.1769
CYS 76ASN 77 0.0147
ASN 77ILE 78 -0.2052
ILE 78PRO 79 0.2488
PRO 79CYS 80 -0.0646
CYS 80SER 81 -0.0076
SER 81ALA 82 0.1841
ALA 82LEU 83 -0.0573
LEU 83LEU 84 0.0802
LEU 84SER 85 -0.0542
SER 85SER 86 -0.2326
SER 86ASP 87 0.2607
ASP 87ILE 88 -0.0361
ILE 88THR 89 0.0213
THR 89ALA 90 -0.0606
ALA 90SER 91 -0.1186
SER 91VAL 92 0.2875
VAL 92ASN 93 -0.2013
ASN 93CYS 94 0.0080
CYS 94ALA 95 0.0095
ALA 95LYS 96 0.1200
LYS 96LYS 97 0.0988
LYS 97ILE 98 -0.0214
ILE 98VAL 99 0.3567
VAL 99SER 100 -0.3780
SER 100ASP 101 0.3271
ASP 101GLY 102 0.2001
GLY 102ASN 103 -0.3574
ASN 103GLY 104 0.2111
GLY 104MET 105 -0.4719
MET 105ASN 106 0.1033
ASN 106ALA 107 -0.0143
ALA 107TRP 108 -0.4201
TRP 108VAL 109 0.1271
VAL 109ALA 110 -0.1705
ALA 110TRP 111 0.1924
TRP 111ARG 112 -0.0377
ARG 112ASN 113 -0.0475
ASN 113ARG 114 -0.0733
ARG 114CYS 115 0.2260
CYS 115LYS 116 -0.1627
LYS 116GLY 117 -0.2323
GLY 117THR 118 -0.2126
THR 118ASP 119 -0.0586
ASP 119VAL 120 0.0076
VAL 120GLN 121 -0.0934
GLN 121ALA 122 0.0710
ALA 122TRP 123 0.0229
TRP 123ILE 124 -0.3957
ILE 124ARG 125 0.2015
ARG 125GLY 126 -0.0260
GLY 126CYS 127 -0.1223
CYS 127ARG 128 0.4261
ARG 128LEU 129 -0.3528

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.