This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0848
VAL 2
PHE 3
0.3264
PHE 3
GLY 4
0.0145
GLY 4
ARG 5
0.0941
ARG 5
CYS 6
-0.1380
CYS 6
GLU 7
0.1811
GLU 7
LEU 8
-0.1391
LEU 8
ALA 9
0.2042
ALA 9
ALA 10
-0.1201
ALA 10
ALA 11
0.1834
ALA 11
MET 12
0.0217
MET 12
LYS 13
-0.1161
LYS 13
ARG 14
0.1095
ARG 14
HIS 15
0.1819
HIS 15
GLY 16
0.1000
GLY 16
LEU 17
0.0272
LEU 17
ASP 18
-0.0557
ASP 18
ASN 19
-0.0253
ASN 19
TYR 20
-0.1032
TYR 20
ARG 21
0.1598
ARG 21
GLY 22
-0.0563
GLY 22
TYR 23
0.0589
TYR 23
SER 24
0.2339
SER 24
LEU 25
-0.0801
LEU 25
GLY 26
0.0804
GLY 26
ASN 27
-0.1933
ASN 27
TRP 28
0.1411
TRP 28
VAL 29
-0.3220
VAL 29
CYS 30
-0.1951
CYS 30
ALA 31
-0.0968
ALA 31
ALA 32
-0.2555
ALA 32
LYS 33
0.0275
LYS 33
PHE 34
-0.5195
PHE 34
GLU 35
0.2920
GLU 35
SER 36
-0.7761
SER 36
ASN 37
-0.0374
ASN 37
PHE 38
-0.1150
PHE 38
ASN 39
0.2124
ASN 39
THR 40
-0.0409
THR 40
GLN 41
0.2305
GLN 41
ALA 42
-0.2099
ALA 42
THR 43
-0.3194
THR 43
ASN 44
-0.2185
ASN 44
ARG 45
0.1817
ARG 45
ASN 46
-0.0339
ASN 46
THR 47
0.2788
THR 47
ASP 48
-0.0469
ASP 48
GLY 49
-0.0648
GLY 49
SER 50
0.0526
SER 50
THR 51
-0.1374
THR 51
ASP 52
0.1760
ASP 52
TYR 53
0.0177
TYR 53
GLY 54
-0.0301
GLY 54
ILE 55
0.0613
ILE 55
LEU 56
-0.1573
LEU 56
GLN 57
0.5029
GLN 57
ILE 58
-0.4798
ILE 58
ASN 59
0.1233
ASN 59
SER 60
0.0869
SER 60
ARG 61
-0.1778
ARG 61
TRP 62
0.1101
TRP 62
TRP 63
-0.2006
TRP 63
CYS 64
0.3549
CYS 64
ASN 65
0.0992
ASN 65
ASP 66
0.3206
ASP 66
GLY 67
-0.2771
GLY 67
ARG 68
0.0911
ARG 68
THR 69
-0.1117
THR 69
PRO 70
0.0694
PRO 70
GLY 71
-0.1384
GLY 71
SER 72
0.0089
SER 72
ARG 73
0.0684
ARG 73
ASN 74
-0.1300
ASN 74
LEU 75
0.2254
LEU 75
CYS 76
-0.1769
CYS 76
ASN 77
0.0147
ASN 77
ILE 78
-0.2052
ILE 78
PRO 79
0.2488
PRO 79
CYS 80
-0.0646
CYS 80
SER 81
-0.0076
SER 81
ALA 82
0.1841
ALA 82
LEU 83
-0.0573
LEU 83
LEU 84
0.0802
LEU 84
SER 85
-0.0542
SER 85
SER 86
-0.2326
SER 86
ASP 87
0.2607
ASP 87
ILE 88
-0.0361
ILE 88
THR 89
0.0213
THR 89
ALA 90
-0.0606
ALA 90
SER 91
-0.1186
SER 91
VAL 92
0.2875
VAL 92
ASN 93
-0.2013
ASN 93
CYS 94
0.0080
CYS 94
ALA 95
0.0095
ALA 95
LYS 96
0.1200
LYS 96
LYS 97
0.0988
LYS 97
ILE 98
-0.0214
ILE 98
VAL 99
0.3567
VAL 99
SER 100
-0.3780
SER 100
ASP 101
0.3271
ASP 101
GLY 102
0.2001
GLY 102
ASN 103
-0.3574
ASN 103
GLY 104
0.2111
GLY 104
MET 105
-0.4719
MET 105
ASN 106
0.1033
ASN 106
ALA 107
-0.0143
ALA 107
TRP 108
-0.4201
TRP 108
VAL 109
0.1271
VAL 109
ALA 110
-0.1705
ALA 110
TRP 111
0.1924
TRP 111
ARG 112
-0.0377
ARG 112
ASN 113
-0.0475
ASN 113
ARG 114
-0.0733
ARG 114
CYS 115
0.2260
CYS 115
LYS 116
-0.1627
LYS 116
GLY 117
-0.2323
GLY 117
THR 118
-0.2126
THR 118
ASP 119
-0.0586
ASP 119
VAL 120
0.0076
VAL 120
GLN 121
-0.0934
GLN 121
ALA 122
0.0710
ALA 122
TRP 123
0.0229
TRP 123
ILE 124
-0.3957
ILE 124
ARG 125
0.2015
ARG 125
GLY 126
-0.0260
GLY 126
CYS 127
-0.1223
CYS 127
ARG 128
0.4261
ARG 128
LEU 129
-0.3528
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.