CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 23  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0378
VAL 2PHE 3 -0.1388
PHE 3GLY 4 -0.0681
GLY 4ARG 5 -0.3868
ARG 5CYS 6 0.1424
CYS 6GLU 7 -0.2078
GLU 7LEU 8 0.1095
LEU 8ALA 9 -0.2393
ALA 9ALA 10 0.0775
ALA 10ALA 11 0.0833
ALA 11MET 12 -0.0620
MET 12LYS 13 -0.0240
LYS 13ARG 14 -0.0391
ARG 14HIS 15 0.0945
HIS 15GLY 16 -0.0618
GLY 16LEU 17 -0.1864
LEU 17ASP 18 0.0976
ASP 18ASN 19 -0.0315
ASN 19TYR 20 0.0735
TYR 20ARG 21 -0.0433
ARG 21GLY 22 0.0856
GLY 22TYR 23 -0.0325
TYR 23SER 24 -0.0115
SER 24LEU 25 -0.2111
LEU 25GLY 26 -0.0682
GLY 26ASN 27 0.2103
ASN 27TRP 28 -0.0802
TRP 28VAL 29 0.0999
VAL 29CYS 30 0.0929
CYS 30ALA 31 0.1578
ALA 31ALA 32 -0.0347
ALA 32LYS 33 0.1178
LYS 33PHE 34 0.0019
PHE 34GLU 35 -0.0367
GLU 35SER 36 -0.1661
SER 36ASN 37 0.1800
ASN 37PHE 38 0.0573
PHE 38ASN 39 -0.3434
ASN 39THR 40 -0.0143
THR 40GLN 41 -0.1819
GLN 41ALA 42 -0.0888
ALA 42THR 43 0.0426
THR 43ASN 44 0.1372
ASN 44ARG 45 -0.6008
ARG 45ASN 46 -0.2029
ASN 46THR 47 -0.2556
THR 47ASP 48 0.3403
ASP 48GLY 49 -0.2133
GLY 49SER 50 -0.0139
SER 50THR 51 0.1187
THR 51ASP 52 -0.0555
ASP 52TYR 53 -0.1830
TYR 53GLY 54 0.2692
GLY 54ILE 55 0.0823
ILE 55LEU 56 0.0125
LEU 56GLN 57 -0.4336
GLN 57ILE 58 0.0823
ILE 58ASN 59 0.0556
ASN 59SER 60 -0.0117
SER 60ARG 61 0.2258
ARG 61TRP 62 -0.0540
TRP 62TRP 63 0.0809
TRP 63CYS 64 0.2888
CYS 64ASN 65 0.0272
ASN 65ASP 66 -0.1158
ASP 66GLY 67 0.4174
GLY 67ARG 68 0.0375
ARG 68THR 69 -0.0669
THR 69PRO 70 0.0815
PRO 70GLY 71 0.5324
GLY 71SER 72 -0.0363
SER 72ARG 73 0.0597
ARG 73ASN 74 0.4615
ASN 74LEU 75 0.1425
LEU 75CYS 76 0.0633
CYS 76ASN 77 0.1515
ASN 77ILE 78 -0.0343
ILE 78PRO 79 0.1380
PRO 79CYS 80 -0.2783
CYS 80SER 81 0.0389
SER 81ALA 82 -0.0062
ALA 82LEU 83 -0.0683
LEU 83LEU 84 0.1680
LEU 84SER 85 -0.1367
SER 85SER 86 0.3227
SER 86ASP 87 0.0547
ASP 87ILE 88 -0.1151
ILE 88THR 89 0.0461
THR 89ALA 90 0.0594
ALA 90SER 91 0.0069
SER 91VAL 92 -0.0654
VAL 92ASN 93 0.0952
ASN 93CYS 94 -0.1903
CYS 94ALA 95 0.1799
ALA 95LYS 96 -0.1599
LYS 96LYS 97 0.1440
LYS 97ILE 98 0.1345
ILE 98VAL 99 0.1019
VAL 99SER 100 -0.1286
SER 100ASP 101 0.1631
ASP 101GLY 102 0.1531
GLY 102ASN 103 -0.1025
ASN 103GLY 104 -0.2935
GLY 104MET 105 -0.2198
MET 105ASN 106 0.0460
ASN 106ALA 107 -0.0509
ALA 107TRP 108 0.5555
TRP 108VAL 109 -0.3537
VAL 109ALA 110 0.2332
ALA 110TRP 111 -0.1260
TRP 111ARG 112 0.1198
ARG 112ASN 113 -0.2901
ASN 113ARG 114 0.2295
ARG 114CYS 115 0.1392
CYS 115LYS 116 -0.2753
LYS 116GLY 117 -0.0772
GLY 117THR 118 -0.0201
THR 118ASP 119 0.6031
ASP 119VAL 120 -0.1929
VAL 120GLN 121 0.4368
GLN 121ALA 122 -0.0110
ALA 122TRP 123 0.0232
TRP 123ILE 124 0.0072
ILE 124ARG 125 0.3195
ARG 125GLY 126 0.0527
GLY 126CYS 127 0.0143
CYS 127ARG 128 0.2803
ARG 128LEU 129 -0.0364

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.