CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 24  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.1360
VAL 2PHE 3 -0.0457
PHE 3GLY 4 -0.3040
GLY 4ARG 5 -0.1079
ARG 5CYS 6 -0.1100
CYS 6GLU 7 -0.1240
GLU 7LEU 8 0.0074
LEU 8ALA 9 -0.1084
ALA 9ALA 10 -0.0835
ALA 10ALA 11 -0.0094
ALA 11MET 12 -0.0626
MET 12LYS 13 0.1598
LYS 13ARG 14 -0.1379
ARG 14HIS 15 0.1349
HIS 15GLY 16 0.0198
GLY 16LEU 17 -0.0264
LEU 17ASP 18 0.1384
ASP 18ASN 19 0.0143
ASN 19TYR 20 0.0064
TYR 20ARG 21 -0.0647
ARG 21GLY 22 0.0288
GLY 22TYR 23 0.1287
TYR 23SER 24 0.1891
SER 24LEU 25 0.0455
LEU 25GLY 26 -0.1289
GLY 26ASN 27 -0.0154
ASN 27TRP 28 0.0245
TRP 28VAL 29 0.1423
VAL 29CYS 30 -0.2636
CYS 30ALA 31 -0.0627
ALA 31ALA 32 -0.0491
ALA 32LYS 33 0.0479
LYS 33PHE 34 -0.1868
PHE 34GLU 35 -0.2111
GLU 35SER 36 -0.1298
SER 36ASN 37 0.0557
ASN 37PHE 38 -0.0047
PHE 38ASN 39 -0.2961
ASN 39THR 40 -0.2086
THR 40GLN 41 0.0745
GLN 41ALA 42 -0.0532
ALA 42THR 43 0.0965
THR 43ASN 44 -0.3312
ASN 44ARG 45 0.0820
ARG 45ASN 46 0.2104
ASN 46THR 47 -0.4486
THR 47ASP 48 0.2261
ASP 48GLY 49 -0.3454
GLY 49SER 50 0.0584
SER 50THR 51 0.0079
THR 51ASP 52 0.1204
ASP 52TYR 53 -0.2775
TYR 53GLY 54 0.0946
GLY 54ILE 55 -0.1164
ILE 55LEU 56 0.0471
LEU 56GLN 57 0.1593
GLN 57ILE 58 0.0611
ILE 58ASN 59 0.1541
ASN 59SER 60 -0.0158
SER 60ARG 61 -0.0286
ARG 61TRP 62 0.0519
TRP 62TRP 63 0.2300
TRP 63CYS 64 -0.2487
CYS 64ASN 65 -0.0940
ASN 65ASP 66 -0.3011
ASP 66GLY 67 0.2370
GLY 67ARG 68 -0.1255
ARG 68THR 69 0.0897
THR 69PRO 70 -0.1906
PRO 70GLY 71 0.3488
GLY 71SER 72 -0.0073
SER 72ARG 73 -0.0786
ARG 73ASN 74 0.1787
ASN 74LEU 75 -0.3582
LEU 75CYS 76 0.1488
CYS 76ASN 77 0.0320
ASN 77ILE 78 -0.2358
ILE 78PRO 79 -0.2203
PRO 79CYS 80 -0.0896
CYS 80SER 81 0.0284
SER 81ALA 82 -0.0209
ALA 82LEU 83 -0.1570
LEU 83LEU 84 0.0457
LEU 84SER 85 0.0488
SER 85SER 86 -0.2751
SER 86ASP 87 -0.0442
ASP 87ILE 88 -0.0115
ILE 88THR 89 -0.2399
THR 89ALA 90 0.1012
ALA 90SER 91 -0.1294
SER 91VAL 92 0.0598
VAL 92ASN 93 -0.0518
ASN 93CYS 94 0.1522
CYS 94ALA 95 -0.1616
ALA 95LYS 96 -0.0124
LYS 96LYS 97 -0.0500
LYS 97ILE 98 0.0324
ILE 98VAL 99 -0.1534
VAL 99SER 100 0.2311
SER 100ASP 101 -0.2816
ASP 101GLY 102 -0.0110
GLY 102ASN 103 0.3332
ASN 103GLY 104 0.1498
GLY 104MET 105 0.1299
MET 105ASN 106 -0.0440
ASN 106ALA 107 -0.0871
ALA 107TRP 108 -0.0774
TRP 108VAL 109 -0.0242
VAL 109ALA 110 -0.0166
ALA 110TRP 111 0.1775
TRP 111ARG 112 -0.1893
ARG 112ASN 113 0.2220
ASN 113ARG 114 -0.0574
ARG 114CYS 115 0.1788
CYS 115LYS 116 -0.1729
LYS 116GLY 117 0.0386
GLY 117THR 118 -0.0484
THR 118ASP 119 0.1043
ASP 119VAL 120 -0.1632
VAL 120GLN 121 0.4332
GLN 121ALA 122 0.0873
ALA 122TRP 123 0.1851
TRP 123ILE 124 -0.5440
ILE 124ARG 125 0.2393
ARG 125GLY 126 0.2143
GLY 126CYS 127 0.0069
CYS 127ARG 128 0.1794
ARG 128LEU 129 -0.3820

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.