This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.1360
VAL 2
PHE 3
-0.0457
PHE 3
GLY 4
-0.3040
GLY 4
ARG 5
-0.1079
ARG 5
CYS 6
-0.1100
CYS 6
GLU 7
-0.1240
GLU 7
LEU 8
0.0074
LEU 8
ALA 9
-0.1084
ALA 9
ALA 10
-0.0835
ALA 10
ALA 11
-0.0094
ALA 11
MET 12
-0.0626
MET 12
LYS 13
0.1598
LYS 13
ARG 14
-0.1379
ARG 14
HIS 15
0.1349
HIS 15
GLY 16
0.0198
GLY 16
LEU 17
-0.0264
LEU 17
ASP 18
0.1384
ASP 18
ASN 19
0.0143
ASN 19
TYR 20
0.0064
TYR 20
ARG 21
-0.0647
ARG 21
GLY 22
0.0288
GLY 22
TYR 23
0.1287
TYR 23
SER 24
0.1891
SER 24
LEU 25
0.0455
LEU 25
GLY 26
-0.1289
GLY 26
ASN 27
-0.0154
ASN 27
TRP 28
0.0245
TRP 28
VAL 29
0.1423
VAL 29
CYS 30
-0.2636
CYS 30
ALA 31
-0.0627
ALA 31
ALA 32
-0.0491
ALA 32
LYS 33
0.0479
LYS 33
PHE 34
-0.1868
PHE 34
GLU 35
-0.2111
GLU 35
SER 36
-0.1298
SER 36
ASN 37
0.0557
ASN 37
PHE 38
-0.0047
PHE 38
ASN 39
-0.2961
ASN 39
THR 40
-0.2086
THR 40
GLN 41
0.0745
GLN 41
ALA 42
-0.0532
ALA 42
THR 43
0.0965
THR 43
ASN 44
-0.3312
ASN 44
ARG 45
0.0820
ARG 45
ASN 46
0.2104
ASN 46
THR 47
-0.4486
THR 47
ASP 48
0.2261
ASP 48
GLY 49
-0.3454
GLY 49
SER 50
0.0584
SER 50
THR 51
0.0079
THR 51
ASP 52
0.1204
ASP 52
TYR 53
-0.2775
TYR 53
GLY 54
0.0946
GLY 54
ILE 55
-0.1164
ILE 55
LEU 56
0.0471
LEU 56
GLN 57
0.1593
GLN 57
ILE 58
0.0611
ILE 58
ASN 59
0.1541
ASN 59
SER 60
-0.0158
SER 60
ARG 61
-0.0286
ARG 61
TRP 62
0.0519
TRP 62
TRP 63
0.2300
TRP 63
CYS 64
-0.2487
CYS 64
ASN 65
-0.0940
ASN 65
ASP 66
-0.3011
ASP 66
GLY 67
0.2370
GLY 67
ARG 68
-0.1255
ARG 68
THR 69
0.0897
THR 69
PRO 70
-0.1906
PRO 70
GLY 71
0.3488
GLY 71
SER 72
-0.0073
SER 72
ARG 73
-0.0786
ARG 73
ASN 74
0.1787
ASN 74
LEU 75
-0.3582
LEU 75
CYS 76
0.1488
CYS 76
ASN 77
0.0320
ASN 77
ILE 78
-0.2358
ILE 78
PRO 79
-0.2203
PRO 79
CYS 80
-0.0896
CYS 80
SER 81
0.0284
SER 81
ALA 82
-0.0209
ALA 82
LEU 83
-0.1570
LEU 83
LEU 84
0.0457
LEU 84
SER 85
0.0488
SER 85
SER 86
-0.2751
SER 86
ASP 87
-0.0442
ASP 87
ILE 88
-0.0115
ILE 88
THR 89
-0.2399
THR 89
ALA 90
0.1012
ALA 90
SER 91
-0.1294
SER 91
VAL 92
0.0598
VAL 92
ASN 93
-0.0518
ASN 93
CYS 94
0.1522
CYS 94
ALA 95
-0.1616
ALA 95
LYS 96
-0.0124
LYS 96
LYS 97
-0.0500
LYS 97
ILE 98
0.0324
ILE 98
VAL 99
-0.1534
VAL 99
SER 100
0.2311
SER 100
ASP 101
-0.2816
ASP 101
GLY 102
-0.0110
GLY 102
ASN 103
0.3332
ASN 103
GLY 104
0.1498
GLY 104
MET 105
0.1299
MET 105
ASN 106
-0.0440
ASN 106
ALA 107
-0.0871
ALA 107
TRP 108
-0.0774
TRP 108
VAL 109
-0.0242
VAL 109
ALA 110
-0.0166
ALA 110
TRP 111
0.1775
TRP 111
ARG 112
-0.1893
ARG 112
ASN 113
0.2220
ASN 113
ARG 114
-0.0574
ARG 114
CYS 115
0.1788
CYS 115
LYS 116
-0.1729
LYS 116
GLY 117
0.0386
GLY 117
THR 118
-0.0484
THR 118
ASP 119
0.1043
ASP 119
VAL 120
-0.1632
VAL 120
GLN 121
0.4332
GLN 121
ALA 122
0.0873
ALA 122
TRP 123
0.1851
TRP 123
ILE 124
-0.5440
ILE 124
ARG 125
0.2393
ARG 125
GLY 126
0.2143
GLY 126
CYS 127
0.0069
CYS 127
ARG 128
0.1794
ARG 128
LEU 129
-0.3820
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.