This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0522
VAL 2
PHE 3
-0.0806
PHE 3
GLY 4
-0.1323
GLY 4
ARG 5
-0.2065
ARG 5
CYS 6
-0.2047
CYS 6
GLU 7
-0.2052
GLU 7
LEU 8
-0.0541
LEU 8
ALA 9
-0.1794
ALA 9
ALA 10
0.1037
ALA 10
ALA 11
-0.0891
ALA 11
MET 12
-0.1333
MET 12
LYS 13
-0.0025
LYS 13
ARG 14
0.0832
ARG 14
HIS 15
-0.1640
HIS 15
GLY 16
-0.0518
GLY 16
LEU 17
0.0600
LEU 17
ASP 18
0.1378
ASP 18
ASN 19
-0.2143
ASN 19
TYR 20
0.1495
TYR 20
ARG 21
-0.2264
ARG 21
GLY 22
-0.0332
GLY 22
TYR 23
0.0583
TYR 23
SER 24
-0.1410
SER 24
LEU 25
-0.1331
LEU 25
GLY 26
0.0450
GLY 26
ASN 27
-0.0777
ASN 27
TRP 28
0.1573
TRP 28
VAL 29
0.0275
VAL 29
CYS 30
-0.1345
CYS 30
ALA 31
0.1361
ALA 31
ALA 32
-0.2192
ALA 32
LYS 33
0.2162
LYS 33
PHE 34
-0.2468
PHE 34
GLU 35
0.4203
GLU 35
SER 36
-0.3207
SER 36
ASN 37
0.2696
ASN 37
PHE 38
-0.0250
PHE 38
ASN 39
-0.1608
ASN 39
THR 40
0.1177
THR 40
GLN 41
-0.1102
GLN 41
ALA 42
-0.1131
ALA 42
THR 43
0.1651
THR 43
ASN 44
-0.1532
ASN 44
ARG 45
0.5530
ARG 45
ASN 46
0.0923
ASN 46
THR 47
0.3572
THR 47
ASP 48
-0.3523
ASP 48
GLY 49
0.7454
GLY 49
SER 50
-0.0669
SER 50
THR 51
-0.0720
THR 51
ASP 52
-0.1130
ASP 52
TYR 53
0.0413
TYR 53
GLY 54
-0.3251
GLY 54
ILE 55
-0.1786
ILE 55
LEU 56
-0.1064
LEU 56
GLN 57
-0.1444
GLN 57
ILE 58
0.4932
ILE 58
ASN 59
-0.6326
ASN 59
SER 60
0.0037
SER 60
ARG 61
0.0446
ARG 61
TRP 62
-0.0882
TRP 62
TRP 63
-0.3072
TRP 63
CYS 64
0.2168
CYS 64
ASN 65
0.1058
ASN 65
ASP 66
-0.1467
ASP 66
GLY 67
-0.0458
GLY 67
ARG 68
-0.2880
ARG 68
THR 69
0.2067
THR 69
PRO 70
0.1485
PRO 70
GLY 71
-0.8621
GLY 71
SER 72
0.2380
SER 72
ARG 73
-0.2174
ARG 73
ASN 74
-0.0854
ASN 74
LEU 75
0.2701
LEU 75
CYS 76
0.1417
CYS 76
ASN 77
0.0113
ASN 77
ILE 78
0.2591
ILE 78
PRO 79
-0.0352
PRO 79
CYS 80
0.2216
CYS 80
SER 81
0.0172
SER 81
ALA 82
-0.2555
ALA 82
LEU 83
0.0921
LEU 83
LEU 84
0.1991
LEU 84
SER 85
-0.2942
SER 85
SER 86
-0.0980
SER 86
ASP 87
0.1236
ASP 87
ILE 88
0.0072
ILE 88
THR 89
0.2036
THR 89
ALA 90
-0.1863
ALA 90
SER 91
0.2339
SER 91
VAL 92
-0.1379
VAL 92
ASN 93
0.3197
ASN 93
CYS 94
-0.1883
CYS 94
ALA 95
0.2799
ALA 95
LYS 96
0.0149
LYS 96
LYS 97
0.0579
LYS 97
ILE 98
0.2990
ILE 98
VAL 99
0.0423
VAL 99
SER 100
0.2981
SER 100
ASP 101
-0.0466
ASP 101
GLY 102
0.3239
GLY 102
ASN 103
0.3990
ASN 103
GLY 104
-0.4882
GLY 104
MET 105
-0.1750
MET 105
ASN 106
-0.0511
ASN 106
ALA 107
-0.2354
ALA 107
TRP 108
0.4055
TRP 108
VAL 109
0.1223
VAL 109
ALA 110
0.0439
ALA 110
TRP 111
0.0478
TRP 111
ARG 112
-0.1818
ARG 112
ASN 113
0.1425
ASN 113
ARG 114
0.0455
ARG 114
CYS 115
-0.0077
CYS 115
LYS 116
-0.1338
LYS 116
GLY 117
0.0842
GLY 117
THR 118
-0.0250
THR 118
ASP 119
0.3042
ASP 119
VAL 120
-0.0296
VAL 120
GLN 121
0.1170
GLN 121
ALA 122
0.0209
ALA 122
TRP 123
0.0558
TRP 123
ILE 124
-0.2688
ILE 124
ARG 125
0.1672
ARG 125
GLY 126
0.0725
GLY 126
CYS 127
0.0827
CYS 127
ARG 128
-0.3001
ARG 128
LEU 129
-0.0659
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.