CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 25  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0522
VAL 2PHE 3 -0.0806
PHE 3GLY 4 -0.1323
GLY 4ARG 5 -0.2065
ARG 5CYS 6 -0.2047
CYS 6GLU 7 -0.2052
GLU 7LEU 8 -0.0541
LEU 8ALA 9 -0.1794
ALA 9ALA 10 0.1037
ALA 10ALA 11 -0.0891
ALA 11MET 12 -0.1333
MET 12LYS 13 -0.0025
LYS 13ARG 14 0.0832
ARG 14HIS 15 -0.1640
HIS 15GLY 16 -0.0518
GLY 16LEU 17 0.0600
LEU 17ASP 18 0.1378
ASP 18ASN 19 -0.2143
ASN 19TYR 20 0.1495
TYR 20ARG 21 -0.2264
ARG 21GLY 22 -0.0332
GLY 22TYR 23 0.0583
TYR 23SER 24 -0.1410
SER 24LEU 25 -0.1331
LEU 25GLY 26 0.0450
GLY 26ASN 27 -0.0777
ASN 27TRP 28 0.1573
TRP 28VAL 29 0.0275
VAL 29CYS 30 -0.1345
CYS 30ALA 31 0.1361
ALA 31ALA 32 -0.2192
ALA 32LYS 33 0.2162
LYS 33PHE 34 -0.2468
PHE 34GLU 35 0.4203
GLU 35SER 36 -0.3207
SER 36ASN 37 0.2696
ASN 37PHE 38 -0.0250
PHE 38ASN 39 -0.1608
ASN 39THR 40 0.1177
THR 40GLN 41 -0.1102
GLN 41ALA 42 -0.1131
ALA 42THR 43 0.1651
THR 43ASN 44 -0.1532
ASN 44ARG 45 0.5530
ARG 45ASN 46 0.0923
ASN 46THR 47 0.3572
THR 47ASP 48 -0.3523
ASP 48GLY 49 0.7454
GLY 49SER 50 -0.0669
SER 50THR 51 -0.0720
THR 51ASP 52 -0.1130
ASP 52TYR 53 0.0413
TYR 53GLY 54 -0.3251
GLY 54ILE 55 -0.1786
ILE 55LEU 56 -0.1064
LEU 56GLN 57 -0.1444
GLN 57ILE 58 0.4932
ILE 58ASN 59 -0.6326
ASN 59SER 60 0.0037
SER 60ARG 61 0.0446
ARG 61TRP 62 -0.0882
TRP 62TRP 63 -0.3072
TRP 63CYS 64 0.2168
CYS 64ASN 65 0.1058
ASN 65ASP 66 -0.1467
ASP 66GLY 67 -0.0458
GLY 67ARG 68 -0.2880
ARG 68THR 69 0.2067
THR 69PRO 70 0.1485
PRO 70GLY 71 -0.8621
GLY 71SER 72 0.2380
SER 72ARG 73 -0.2174
ARG 73ASN 74 -0.0854
ASN 74LEU 75 0.2701
LEU 75CYS 76 0.1417
CYS 76ASN 77 0.0113
ASN 77ILE 78 0.2591
ILE 78PRO 79 -0.0352
PRO 79CYS 80 0.2216
CYS 80SER 81 0.0172
SER 81ALA 82 -0.2555
ALA 82LEU 83 0.0921
LEU 83LEU 84 0.1991
LEU 84SER 85 -0.2942
SER 85SER 86 -0.0980
SER 86ASP 87 0.1236
ASP 87ILE 88 0.0072
ILE 88THR 89 0.2036
THR 89ALA 90 -0.1863
ALA 90SER 91 0.2339
SER 91VAL 92 -0.1379
VAL 92ASN 93 0.3197
ASN 93CYS 94 -0.1883
CYS 94ALA 95 0.2799
ALA 95LYS 96 0.0149
LYS 96LYS 97 0.0579
LYS 97ILE 98 0.2990
ILE 98VAL 99 0.0423
VAL 99SER 100 0.2981
SER 100ASP 101 -0.0466
ASP 101GLY 102 0.3239
GLY 102ASN 103 0.3990
ASN 103GLY 104 -0.4882
GLY 104MET 105 -0.1750
MET 105ASN 106 -0.0511
ASN 106ALA 107 -0.2354
ALA 107TRP 108 0.4055
TRP 108VAL 109 0.1223
VAL 109ALA 110 0.0439
ALA 110TRP 111 0.0478
TRP 111ARG 112 -0.1818
ARG 112ASN 113 0.1425
ASN 113ARG 114 0.0455
ARG 114CYS 115 -0.0077
CYS 115LYS 116 -0.1338
LYS 116GLY 117 0.0842
GLY 117THR 118 -0.0250
THR 118ASP 119 0.3042
ASP 119VAL 120 -0.0296
VAL 120GLN 121 0.1170
GLN 121ALA 122 0.0209
ALA 122TRP 123 0.0558
TRP 123ILE 124 -0.2688
ILE 124ARG 125 0.1672
ARG 125GLY 126 0.0725
GLY 126CYS 127 0.0827
CYS 127ARG 128 -0.3001
ARG 128LEU 129 -0.0659

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.