CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 26  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.2547
VAL 2PHE 3 -0.7086
PHE 3GLY 4 0.1599
GLY 4ARG 5 -0.1017
ARG 5CYS 6 -0.0139
CYS 6GLU 7 -0.2083
GLU 7LEU 8 0.1470
LEU 8ALA 9 -0.4864
ALA 9ALA 10 0.4189
ALA 10ALA 11 -0.0761
ALA 11MET 12 -0.0485
MET 12LYS 13 -0.3842
LYS 13ARG 14 0.2649
ARG 14HIS 15 -0.0722
HIS 15GLY 16 -0.6385
GLY 16LEU 17 0.1793
LEU 17ASP 18 -0.1400
ASP 18ASN 19 -0.5202
ASN 19TYR 20 -0.1262
TYR 20ARG 21 -0.0902
ARG 21GLY 22 -0.0632
GLY 22TYR 23 -0.0330
TYR 23SER 24 0.3548
SER 24LEU 25 -0.2613
LEU 25GLY 26 0.1615
GLY 26ASN 27 0.0798
ASN 27TRP 28 0.1407
TRP 28VAL 29 -0.1080
VAL 29CYS 30 0.2480
CYS 30ALA 31 -0.0489
ALA 31ALA 32 0.0659
ALA 32LYS 33 0.0150
LYS 33PHE 34 0.0977
PHE 34GLU 35 -0.0235
GLU 35SER 36 0.2624
SER 36ASN 37 0.0461
ASN 37PHE 38 -0.1238
PHE 38ASN 39 -0.2344
ASN 39THR 40 0.2036
THR 40GLN 41 -0.3035
GLN 41ALA 42 0.1975
ALA 42THR 43 0.1982
THR 43ASN 44 0.0912
ASN 44ARG 45 -0.0195
ARG 45ASN 46 0.0133
ASN 46THR 47 -0.0430
THR 47ASP 48 0.0491
ASP 48GLY 49 -0.2318
GLY 49SER 50 -0.0255
SER 50THR 51 0.2732
THR 51ASP 52 0.0631
ASP 52TYR 53 -0.1693
TYR 53GLY 54 0.1428
GLY 54ILE 55 -0.0391
ILE 55LEU 56 -0.0272
LEU 56GLN 57 -0.1946
GLN 57ILE 58 0.1537
ILE 58ASN 59 -0.1273
ASN 59SER 60 0.0501
SER 60ARG 61 0.1011
ARG 61TRP 62 -0.1394
TRP 62TRP 63 -0.2280
TRP 63CYS 64 0.2203
CYS 64ASN 65 0.1363
ASN 65ASP 66 0.0908
ASP 66GLY 67 0.0662
GLY 67ARG 68 -0.1544
ARG 68THR 69 -0.1564
THR 69PRO 70 0.1634
PRO 70GLY 71 0.0759
GLY 71SER 72 -0.2537
SER 72ARG 73 0.0307
ARG 73ASN 74 -0.1719
ASN 74LEU 75 0.3085
LEU 75CYS 76 -0.3687
CYS 76ASN 77 0.1273
ASN 77ILE 78 0.0170
ILE 78PRO 79 0.1898
PRO 79CYS 80 -0.0789
CYS 80SER 81 0.0065
SER 81ALA 82 -0.0666
ALA 82LEU 83 0.1137
LEU 83LEU 84 -0.1152
LEU 84SER 85 -0.0671
SER 85SER 86 0.2527
SER 86ASP 87 -0.1693
ASP 87ILE 88 0.1303
ILE 88THR 89 0.3600
THR 89ALA 90 -0.2799
ALA 90SER 91 0.1650
SER 91VAL 92 -0.2255
VAL 92ASN 93 0.2267
ASN 93CYS 94 -0.2421
CYS 94ALA 95 0.2550
ALA 95LYS 96 -0.0525
LYS 96LYS 97 0.0631
LYS 97ILE 98 0.0489
ILE 98VAL 99 0.3374
VAL 99SER 100 -0.2543
SER 100ASP 101 0.1405
ASP 101GLY 102 -0.1240
GLY 102ASN 103 -0.1720
ASN 103GLY 104 0.4351
GLY 104MET 105 -0.0286
MET 105ASN 106 0.0170
ASN 106ALA 107 0.1481
ALA 107TRP 108 -0.4607
TRP 108VAL 109 -0.0641
VAL 109ALA 110 -0.0980
ALA 110TRP 111 0.1735
TRP 111ARG 112 0.1742
ARG 112ASN 113 -0.0437
ASN 113ARG 114 0.0871
ARG 114CYS 115 0.2396
CYS 115LYS 116 0.1791
LYS 116GLY 117 0.0397
GLY 117THR 118 -0.0223
THR 118ASP 119 0.2892
ASP 119VAL 120 -0.0952
VAL 120GLN 121 0.2576
GLN 121ALA 122 -0.1598
ALA 122TRP 123 -0.1358
TRP 123ILE 124 0.1992
ILE 124ARG 125 -0.0023
ARG 125GLY 126 0.1612
GLY 126CYS 127 -0.1773
CYS 127ARG 128 0.4812
ARG 128LEU 129 -0.2066

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.