This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.2547
VAL 2
PHE 3
-0.7086
PHE 3
GLY 4
0.1599
GLY 4
ARG 5
-0.1017
ARG 5
CYS 6
-0.0139
CYS 6
GLU 7
-0.2083
GLU 7
LEU 8
0.1470
LEU 8
ALA 9
-0.4864
ALA 9
ALA 10
0.4189
ALA 10
ALA 11
-0.0761
ALA 11
MET 12
-0.0485
MET 12
LYS 13
-0.3842
LYS 13
ARG 14
0.2649
ARG 14
HIS 15
-0.0722
HIS 15
GLY 16
-0.6385
GLY 16
LEU 17
0.1793
LEU 17
ASP 18
-0.1400
ASP 18
ASN 19
-0.5202
ASN 19
TYR 20
-0.1262
TYR 20
ARG 21
-0.0902
ARG 21
GLY 22
-0.0632
GLY 22
TYR 23
-0.0330
TYR 23
SER 24
0.3548
SER 24
LEU 25
-0.2613
LEU 25
GLY 26
0.1615
GLY 26
ASN 27
0.0798
ASN 27
TRP 28
0.1407
TRP 28
VAL 29
-0.1080
VAL 29
CYS 30
0.2480
CYS 30
ALA 31
-0.0489
ALA 31
ALA 32
0.0659
ALA 32
LYS 33
0.0150
LYS 33
PHE 34
0.0977
PHE 34
GLU 35
-0.0235
GLU 35
SER 36
0.2624
SER 36
ASN 37
0.0461
ASN 37
PHE 38
-0.1238
PHE 38
ASN 39
-0.2344
ASN 39
THR 40
0.2036
THR 40
GLN 41
-0.3035
GLN 41
ALA 42
0.1975
ALA 42
THR 43
0.1982
THR 43
ASN 44
0.0912
ASN 44
ARG 45
-0.0195
ARG 45
ASN 46
0.0133
ASN 46
THR 47
-0.0430
THR 47
ASP 48
0.0491
ASP 48
GLY 49
-0.2318
GLY 49
SER 50
-0.0255
SER 50
THR 51
0.2732
THR 51
ASP 52
0.0631
ASP 52
TYR 53
-0.1693
TYR 53
GLY 54
0.1428
GLY 54
ILE 55
-0.0391
ILE 55
LEU 56
-0.0272
LEU 56
GLN 57
-0.1946
GLN 57
ILE 58
0.1537
ILE 58
ASN 59
-0.1273
ASN 59
SER 60
0.0501
SER 60
ARG 61
0.1011
ARG 61
TRP 62
-0.1394
TRP 62
TRP 63
-0.2280
TRP 63
CYS 64
0.2203
CYS 64
ASN 65
0.1363
ASN 65
ASP 66
0.0908
ASP 66
GLY 67
0.0662
GLY 67
ARG 68
-0.1544
ARG 68
THR 69
-0.1564
THR 69
PRO 70
0.1634
PRO 70
GLY 71
0.0759
GLY 71
SER 72
-0.2537
SER 72
ARG 73
0.0307
ARG 73
ASN 74
-0.1719
ASN 74
LEU 75
0.3085
LEU 75
CYS 76
-0.3687
CYS 76
ASN 77
0.1273
ASN 77
ILE 78
0.0170
ILE 78
PRO 79
0.1898
PRO 79
CYS 80
-0.0789
CYS 80
SER 81
0.0065
SER 81
ALA 82
-0.0666
ALA 82
LEU 83
0.1137
LEU 83
LEU 84
-0.1152
LEU 84
SER 85
-0.0671
SER 85
SER 86
0.2527
SER 86
ASP 87
-0.1693
ASP 87
ILE 88
0.1303
ILE 88
THR 89
0.3600
THR 89
ALA 90
-0.2799
ALA 90
SER 91
0.1650
SER 91
VAL 92
-0.2255
VAL 92
ASN 93
0.2267
ASN 93
CYS 94
-0.2421
CYS 94
ALA 95
0.2550
ALA 95
LYS 96
-0.0525
LYS 96
LYS 97
0.0631
LYS 97
ILE 98
0.0489
ILE 98
VAL 99
0.3374
VAL 99
SER 100
-0.2543
SER 100
ASP 101
0.1405
ASP 101
GLY 102
-0.1240
GLY 102
ASN 103
-0.1720
ASN 103
GLY 104
0.4351
GLY 104
MET 105
-0.0286
MET 105
ASN 106
0.0170
ASN 106
ALA 107
0.1481
ALA 107
TRP 108
-0.4607
TRP 108
VAL 109
-0.0641
VAL 109
ALA 110
-0.0980
ALA 110
TRP 111
0.1735
TRP 111
ARG 112
0.1742
ARG 112
ASN 113
-0.0437
ASN 113
ARG 114
0.0871
ARG 114
CYS 115
0.2396
CYS 115
LYS 116
0.1791
LYS 116
GLY 117
0.0397
GLY 117
THR 118
-0.0223
THR 118
ASP 119
0.2892
ASP 119
VAL 120
-0.0952
VAL 120
GLN 121
0.2576
GLN 121
ALA 122
-0.1598
ALA 122
TRP 123
-0.1358
TRP 123
ILE 124
0.1992
ILE 124
ARG 125
-0.0023
ARG 125
GLY 126
0.1612
GLY 126
CYS 127
-0.1773
CYS 127
ARG 128
0.4812
ARG 128
LEU 129
-0.2066
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.