This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0761
VAL 2
PHE 3
0.0001
PHE 3
GLY 4
0.0652
GLY 4
ARG 5
0.1200
ARG 5
CYS 6
-0.1090
CYS 6
GLU 7
0.7316
GLU 7
LEU 8
0.0187
LEU 8
ALA 9
0.0304
ALA 9
ALA 10
0.0884
ALA 10
ALA 11
0.5185
ALA 11
MET 12
-0.0617
MET 12
LYS 13
0.0028
LYS 13
ARG 14
0.0687
ARG 14
HIS 15
0.1080
HIS 15
GLY 16
0.4304
GLY 16
LEU 17
-0.2554
LEU 17
ASP 18
-0.0232
ASP 18
ASN 19
0.0924
ASN 19
TYR 20
0.2306
TYR 20
ARG 21
0.1471
ARG 21
GLY 22
0.0618
GLY 22
TYR 23
-0.2074
TYR 23
SER 24
-0.1074
SER 24
LEU 25
-0.1260
LEU 25
GLY 26
0.0647
GLY 26
ASN 27
-0.1748
ASN 27
TRP 28
-0.0505
TRP 28
VAL 29
0.0234
VAL 29
CYS 30
0.2047
CYS 30
ALA 31
-0.0727
ALA 31
ALA 32
0.1448
ALA 32
LYS 33
0.0005
LYS 33
PHE 34
0.3610
PHE 34
GLU 35
-0.4311
GLU 35
SER 36
0.2388
SER 36
ASN 37
0.0806
ASN 37
PHE 38
0.1796
PHE 38
ASN 39
-0.2781
ASN 39
THR 40
-0.1495
THR 40
GLN 41
0.0322
GLN 41
ALA 42
-0.1851
ALA 42
THR 43
0.2219
THR 43
ASN 44
-0.1162
ASN 44
ARG 45
0.2624
ARG 45
ASN 46
0.0038
ASN 46
THR 47
0.0205
THR 47
ASP 48
-0.5165
ASP 48
GLY 49
0.4630
GLY 49
SER 50
0.0077
SER 50
THR 51
-0.1107
THR 51
ASP 52
0.1009
ASP 52
TYR 53
-0.1190
TYR 53
GLY 54
0.0645
GLY 54
ILE 55
-0.0076
ILE 55
LEU 56
0.0717
LEU 56
GLN 57
-0.0584
GLN 57
ILE 58
0.0823
ILE 58
ASN 59
-0.1189
ASN 59
SER 60
0.0270
SER 60
ARG 61
0.0726
ARG 61
TRP 62
-0.0278
TRP 62
TRP 63
0.0890
TRP 63
CYS 64
-0.0618
CYS 64
ASN 65
-0.0182
ASN 65
ASP 66
-0.1869
ASP 66
GLY 67
0.4227
GLY 67
ARG 68
-0.1072
ARG 68
THR 69
0.1037
THR 69
PRO 70
0.0816
PRO 70
GLY 71
-0.4797
GLY 71
SER 72
0.3912
SER 72
ARG 73
-0.2787
ARG 73
ASN 74
0.4449
ASN 74
LEU 75
-0.1308
LEU 75
CYS 76
0.2750
CYS 76
ASN 77
-0.0554
ASN 77
ILE 78
0.1745
ILE 78
PRO 79
0.1028
PRO 79
CYS 80
0.0893
CYS 80
SER 81
-0.0787
SER 81
ALA 82
-0.0553
ALA 82
LEU 83
-0.1644
LEU 83
LEU 84
0.4049
LEU 84
SER 85
-0.2751
SER 85
SER 86
-0.1925
SER 86
ASP 87
0.3631
ASP 87
ILE 88
-0.0446
ILE 88
THR 89
0.0748
THR 89
ALA 90
-0.1840
ALA 90
SER 91
-0.0980
SER 91
VAL 92
0.2323
VAL 92
ASN 93
-0.0831
ASN 93
CYS 94
-0.1951
CYS 94
ALA 95
0.0781
ALA 95
LYS 96
0.1953
LYS 96
LYS 97
0.0982
LYS 97
ILE 98
-0.0203
ILE 98
VAL 99
0.1944
VAL 99
SER 100
-0.3004
SER 100
ASP 101
0.1708
ASP 101
GLY 102
-0.2280
GLY 102
ASN 103
-0.4202
ASN 103
GLY 104
0.4631
GLY 104
MET 105
0.2035
MET 105
ASN 106
-0.1800
ASN 106
ALA 107
0.5216
ALA 107
TRP 108
-0.3780
TRP 108
VAL 109
-0.0456
VAL 109
ALA 110
-0.0725
ALA 110
TRP 111
-0.2550
TRP 111
ARG 112
0.0591
ARG 112
ASN 113
-0.0567
ASN 113
ARG 114
-0.1282
ARG 114
CYS 115
-0.1578
CYS 115
LYS 116
0.0060
LYS 116
GLY 117
-0.0459
GLY 117
THR 118
-0.3150
THR 118
ASP 119
-0.1886
ASP 119
VAL 120
-0.0670
VAL 120
GLN 121
-0.1793
GLN 121
ALA 122
0.0506
ALA 122
TRP 123
0.2466
TRP 123
ILE 124
-0.2515
ILE 124
ARG 125
0.1589
ARG 125
GLY 126
-0.3165
GLY 126
CYS 127
0.1971
CYS 127
ARG 128
0.0635
ARG 128
LEU 129
0.0738
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.