CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 27  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0761
VAL 2PHE 3 0.0001
PHE 3GLY 4 0.0652
GLY 4ARG 5 0.1200
ARG 5CYS 6 -0.1090
CYS 6GLU 7 0.7316
GLU 7LEU 8 0.0187
LEU 8ALA 9 0.0304
ALA 9ALA 10 0.0884
ALA 10ALA 11 0.5185
ALA 11MET 12 -0.0617
MET 12LYS 13 0.0028
LYS 13ARG 14 0.0687
ARG 14HIS 15 0.1080
HIS 15GLY 16 0.4304
GLY 16LEU 17 -0.2554
LEU 17ASP 18 -0.0232
ASP 18ASN 19 0.0924
ASN 19TYR 20 0.2306
TYR 20ARG 21 0.1471
ARG 21GLY 22 0.0618
GLY 22TYR 23 -0.2074
TYR 23SER 24 -0.1074
SER 24LEU 25 -0.1260
LEU 25GLY 26 0.0647
GLY 26ASN 27 -0.1748
ASN 27TRP 28 -0.0505
TRP 28VAL 29 0.0234
VAL 29CYS 30 0.2047
CYS 30ALA 31 -0.0727
ALA 31ALA 32 0.1448
ALA 32LYS 33 0.0005
LYS 33PHE 34 0.3610
PHE 34GLU 35 -0.4311
GLU 35SER 36 0.2388
SER 36ASN 37 0.0806
ASN 37PHE 38 0.1796
PHE 38ASN 39 -0.2781
ASN 39THR 40 -0.1495
THR 40GLN 41 0.0322
GLN 41ALA 42 -0.1851
ALA 42THR 43 0.2219
THR 43ASN 44 -0.1162
ASN 44ARG 45 0.2624
ARG 45ASN 46 0.0038
ASN 46THR 47 0.0205
THR 47ASP 48 -0.5165
ASP 48GLY 49 0.4630
GLY 49SER 50 0.0077
SER 50THR 51 -0.1107
THR 51ASP 52 0.1009
ASP 52TYR 53 -0.1190
TYR 53GLY 54 0.0645
GLY 54ILE 55 -0.0076
ILE 55LEU 56 0.0717
LEU 56GLN 57 -0.0584
GLN 57ILE 58 0.0823
ILE 58ASN 59 -0.1189
ASN 59SER 60 0.0270
SER 60ARG 61 0.0726
ARG 61TRP 62 -0.0278
TRP 62TRP 63 0.0890
TRP 63CYS 64 -0.0618
CYS 64ASN 65 -0.0182
ASN 65ASP 66 -0.1869
ASP 66GLY 67 0.4227
GLY 67ARG 68 -0.1072
ARG 68THR 69 0.1037
THR 69PRO 70 0.0816
PRO 70GLY 71 -0.4797
GLY 71SER 72 0.3912
SER 72ARG 73 -0.2787
ARG 73ASN 74 0.4449
ASN 74LEU 75 -0.1308
LEU 75CYS 76 0.2750
CYS 76ASN 77 -0.0554
ASN 77ILE 78 0.1745
ILE 78PRO 79 0.1028
PRO 79CYS 80 0.0893
CYS 80SER 81 -0.0787
SER 81ALA 82 -0.0553
ALA 82LEU 83 -0.1644
LEU 83LEU 84 0.4049
LEU 84SER 85 -0.2751
SER 85SER 86 -0.1925
SER 86ASP 87 0.3631
ASP 87ILE 88 -0.0446
ILE 88THR 89 0.0748
THR 89ALA 90 -0.1840
ALA 90SER 91 -0.0980
SER 91VAL 92 0.2323
VAL 92ASN 93 -0.0831
ASN 93CYS 94 -0.1951
CYS 94ALA 95 0.0781
ALA 95LYS 96 0.1953
LYS 96LYS 97 0.0982
LYS 97ILE 98 -0.0203
ILE 98VAL 99 0.1944
VAL 99SER 100 -0.3004
SER 100ASP 101 0.1708
ASP 101GLY 102 -0.2280
GLY 102ASN 103 -0.4202
ASN 103GLY 104 0.4631
GLY 104MET 105 0.2035
MET 105ASN 106 -0.1800
ASN 106ALA 107 0.5216
ALA 107TRP 108 -0.3780
TRP 108VAL 109 -0.0456
VAL 109ALA 110 -0.0725
ALA 110TRP 111 -0.2550
TRP 111ARG 112 0.0591
ARG 112ASN 113 -0.0567
ASN 113ARG 114 -0.1282
ARG 114CYS 115 -0.1578
CYS 115LYS 116 0.0060
LYS 116GLY 117 -0.0459
GLY 117THR 118 -0.3150
THR 118ASP 119 -0.1886
ASP 119VAL 120 -0.0670
VAL 120GLN 121 -0.1793
GLN 121ALA 122 0.0506
ALA 122TRP 123 0.2466
TRP 123ILE 124 -0.2515
ILE 124ARG 125 0.1589
ARG 125GLY 126 -0.3165
GLY 126CYS 127 0.1971
CYS 127ARG 128 0.0635
ARG 128LEU 129 0.0738

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.