CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 28  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0295
VAL 2PHE 3 0.1198
PHE 3GLY 4 -0.3001
GLY 4ARG 5 -0.3229
ARG 5CYS 6 -0.0096
CYS 6GLU 7 -0.1211
GLU 7LEU 8 -0.0769
LEU 8ALA 9 0.1044
ALA 9ALA 10 0.0514
ALA 10ALA 11 -0.0602
ALA 11MET 12 0.0612
MET 12LYS 13 0.2263
LYS 13ARG 14 0.1136
ARG 14HIS 15 -0.1144
HIS 15GLY 16 0.7772
GLY 16LEU 17 0.0249
LEU 17ASP 18 0.1320
ASP 18ASN 19 0.2258
ASN 19TYR 20 0.1718
TYR 20ARG 21 0.0954
ARG 21GLY 22 0.0084
GLY 22TYR 23 -0.1377
TYR 23SER 24 -0.0738
SER 24LEU 25 0.1014
LEU 25GLY 26 0.0065
GLY 26ASN 27 -0.0553
ASN 27TRP 28 0.1917
TRP 28VAL 29 -0.5996
VAL 29CYS 30 0.2760
CYS 30ALA 31 -0.0578
ALA 31ALA 32 0.1645
ALA 32LYS 33 -0.0976
LYS 33PHE 34 0.1291
PHE 34GLU 35 -0.0268
GLU 35SER 36 0.1458
SER 36ASN 37 -0.1337
ASN 37PHE 38 0.1552
PHE 38ASN 39 -0.0898
ASN 39THR 40 0.1406
THR 40GLN 41 -0.0493
GLN 41ALA 42 -0.2035
ALA 42THR 43 -0.0705
THR 43ASN 44 0.2125
ASN 44ARG 45 -0.4074
ARG 45ASN 46 -0.1523
ASN 46THR 47 0.1309
THR 47ASP 48 0.3181
ASP 48GLY 49 -0.4351
GLY 49SER 50 0.0017
SER 50THR 51 0.1438
THR 51ASP 52 -0.0286
ASP 52TYR 53 0.1826
TYR 53GLY 54 0.1029
GLY 54ILE 55 0.0693
ILE 55LEU 56 0.0655
LEU 56GLN 57 -0.0934
GLN 57ILE 58 -0.4267
ILE 58ASN 59 0.3818
ASN 59SER 60 -0.0755
SER 60ARG 61 0.0976
ARG 61TRP 62 -0.1231
TRP 62TRP 63 0.1564
TRP 63CYS 64 0.1321
CYS 64ASN 65 0.0466
ASN 65ASP 66 0.2827
ASP 66GLY 67 -0.2089
GLY 67ARG 68 0.1539
ARG 68THR 69 -0.3295
THR 69PRO 70 0.1227
PRO 70GLY 71 -0.0542
GLY 71SER 72 -0.3493
SER 72ARG 73 0.3389
ARG 73ASN 74 -0.9940
ASN 74LEU 75 0.4867
LEU 75CYS 76 0.0020
CYS 76ASN 77 -0.1917
ASN 77ILE 78 0.4895
ILE 78PRO 79 0.1683
PRO 79CYS 80 0.1609
CYS 80SER 81 -0.0954
SER 81ALA 82 -0.0671
ALA 82LEU 83 0.0984
LEU 83LEU 84 0.2395
LEU 84SER 85 -0.1947
SER 85SER 86 0.3059
SER 86ASP 87 0.2347
ASP 87ILE 88 0.0028
ILE 88THR 89 -0.2226
THR 89ALA 90 0.0980
ALA 90SER 91 0.0896
SER 91VAL 92 0.1422
VAL 92ASN 93 -0.2621
ASN 93CYS 94 0.0781
CYS 94ALA 95 -0.0541
ALA 95LYS 96 0.0132
LYS 96LYS 97 -0.4181
LYS 97ILE 98 -0.1791
ILE 98VAL 99 -0.1262
VAL 99SER 100 -0.0295
SER 100ASP 101 -0.3310
ASP 101GLY 102 0.0447
GLY 102ASN 103 0.0159
ASN 103GLY 104 0.1400
GLY 104MET 105 -0.2090
MET 105ASN 106 0.0033
ASN 106ALA 107 0.1059
ALA 107TRP 108 -0.3475
TRP 108VAL 109 0.1997
VAL 109ALA 110 -0.1647
ALA 110TRP 111 -0.1146
TRP 111ARG 112 0.0919
ARG 112ASN 113 -0.0648
ASN 113ARG 114 0.0477
ARG 114CYS 115 0.0010
CYS 115LYS 116 0.0656
LYS 116GLY 117 0.1189
GLY 117THR 118 -0.0366
THR 118ASP 119 0.2552
ASP 119VAL 120 -0.1290
VAL 120GLN 121 0.2641
GLN 121ALA 122 -0.0459
ALA 122TRP 123 0.0177
TRP 123ILE 124 -0.0830
ILE 124ARG 125 0.0185
ARG 125GLY 126 0.0974
GLY 126CYS 127 0.0213
CYS 127ARG 128 -0.2835
ARG 128LEU 129 -0.0043

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.