This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0295
VAL 2
PHE 3
0.1198
PHE 3
GLY 4
-0.3001
GLY 4
ARG 5
-0.3229
ARG 5
CYS 6
-0.0096
CYS 6
GLU 7
-0.1211
GLU 7
LEU 8
-0.0769
LEU 8
ALA 9
0.1044
ALA 9
ALA 10
0.0514
ALA 10
ALA 11
-0.0602
ALA 11
MET 12
0.0612
MET 12
LYS 13
0.2263
LYS 13
ARG 14
0.1136
ARG 14
HIS 15
-0.1144
HIS 15
GLY 16
0.7772
GLY 16
LEU 17
0.0249
LEU 17
ASP 18
0.1320
ASP 18
ASN 19
0.2258
ASN 19
TYR 20
0.1718
TYR 20
ARG 21
0.0954
ARG 21
GLY 22
0.0084
GLY 22
TYR 23
-0.1377
TYR 23
SER 24
-0.0738
SER 24
LEU 25
0.1014
LEU 25
GLY 26
0.0065
GLY 26
ASN 27
-0.0553
ASN 27
TRP 28
0.1917
TRP 28
VAL 29
-0.5996
VAL 29
CYS 30
0.2760
CYS 30
ALA 31
-0.0578
ALA 31
ALA 32
0.1645
ALA 32
LYS 33
-0.0976
LYS 33
PHE 34
0.1291
PHE 34
GLU 35
-0.0268
GLU 35
SER 36
0.1458
SER 36
ASN 37
-0.1337
ASN 37
PHE 38
0.1552
PHE 38
ASN 39
-0.0898
ASN 39
THR 40
0.1406
THR 40
GLN 41
-0.0493
GLN 41
ALA 42
-0.2035
ALA 42
THR 43
-0.0705
THR 43
ASN 44
0.2125
ASN 44
ARG 45
-0.4074
ARG 45
ASN 46
-0.1523
ASN 46
THR 47
0.1309
THR 47
ASP 48
0.3181
ASP 48
GLY 49
-0.4351
GLY 49
SER 50
0.0017
SER 50
THR 51
0.1438
THR 51
ASP 52
-0.0286
ASP 52
TYR 53
0.1826
TYR 53
GLY 54
0.1029
GLY 54
ILE 55
0.0693
ILE 55
LEU 56
0.0655
LEU 56
GLN 57
-0.0934
GLN 57
ILE 58
-0.4267
ILE 58
ASN 59
0.3818
ASN 59
SER 60
-0.0755
SER 60
ARG 61
0.0976
ARG 61
TRP 62
-0.1231
TRP 62
TRP 63
0.1564
TRP 63
CYS 64
0.1321
CYS 64
ASN 65
0.0466
ASN 65
ASP 66
0.2827
ASP 66
GLY 67
-0.2089
GLY 67
ARG 68
0.1539
ARG 68
THR 69
-0.3295
THR 69
PRO 70
0.1227
PRO 70
GLY 71
-0.0542
GLY 71
SER 72
-0.3493
SER 72
ARG 73
0.3389
ARG 73
ASN 74
-0.9940
ASN 74
LEU 75
0.4867
LEU 75
CYS 76
0.0020
CYS 76
ASN 77
-0.1917
ASN 77
ILE 78
0.4895
ILE 78
PRO 79
0.1683
PRO 79
CYS 80
0.1609
CYS 80
SER 81
-0.0954
SER 81
ALA 82
-0.0671
ALA 82
LEU 83
0.0984
LEU 83
LEU 84
0.2395
LEU 84
SER 85
-0.1947
SER 85
SER 86
0.3059
SER 86
ASP 87
0.2347
ASP 87
ILE 88
0.0028
ILE 88
THR 89
-0.2226
THR 89
ALA 90
0.0980
ALA 90
SER 91
0.0896
SER 91
VAL 92
0.1422
VAL 92
ASN 93
-0.2621
ASN 93
CYS 94
0.0781
CYS 94
ALA 95
-0.0541
ALA 95
LYS 96
0.0132
LYS 96
LYS 97
-0.4181
LYS 97
ILE 98
-0.1791
ILE 98
VAL 99
-0.1262
VAL 99
SER 100
-0.0295
SER 100
ASP 101
-0.3310
ASP 101
GLY 102
0.0447
GLY 102
ASN 103
0.0159
ASN 103
GLY 104
0.1400
GLY 104
MET 105
-0.2090
MET 105
ASN 106
0.0033
ASN 106
ALA 107
0.1059
ALA 107
TRP 108
-0.3475
TRP 108
VAL 109
0.1997
VAL 109
ALA 110
-0.1647
ALA 110
TRP 111
-0.1146
TRP 111
ARG 112
0.0919
ARG 112
ASN 113
-0.0648
ASN 113
ARG 114
0.0477
ARG 114
CYS 115
0.0010
CYS 115
LYS 116
0.0656
LYS 116
GLY 117
0.1189
GLY 117
THR 118
-0.0366
THR 118
ASP 119
0.2552
ASP 119
VAL 120
-0.1290
VAL 120
GLN 121
0.2641
GLN 121
ALA 122
-0.0459
ALA 122
TRP 123
0.0177
TRP 123
ILE 124
-0.0830
ILE 124
ARG 125
0.0185
ARG 125
GLY 126
0.0974
GLY 126
CYS 127
0.0213
CYS 127
ARG 128
-0.2835
ARG 128
LEU 129
-0.0043
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.