CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 29  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.0594
VAL 2PHE 3 -0.1134
PHE 3GLY 4 0.0041
GLY 4ARG 5 0.3244
ARG 5CYS 6 0.1725
CYS 6GLU 7 0.3954
GLU 7LEU 8 0.0014
LEU 8ALA 9 0.2561
ALA 9ALA 10 0.0907
ALA 10ALA 11 0.2260
ALA 11MET 12 -0.0539
MET 12LYS 13 0.1944
LYS 13ARG 14 0.0277
ARG 14HIS 15 0.0251
HIS 15GLY 16 -0.0001
GLY 16LEU 17 -0.0209
LEU 17ASP 18 0.1516
ASP 18ASN 19 -0.0202
ASN 19TYR 20 -0.1377
TYR 20ARG 21 -0.0598
ARG 21GLY 22 0.1064
GLY 22TYR 23 0.0370
TYR 23SER 24 0.3359
SER 24LEU 25 0.0889
LEU 25GLY 26 -0.1195
GLY 26ASN 27 0.3818
ASN 27TRP 28 0.0996
TRP 28VAL 29 -0.3025
VAL 29CYS 30 0.3504
CYS 30ALA 31 0.1365
ALA 31ALA 32 0.1821
ALA 32LYS 33 -0.2053
LYS 33PHE 34 0.2016
PHE 34GLU 35 0.0730
GLU 35SER 36 0.0257
SER 36ASN 37 0.0896
ASN 37PHE 38 -0.1094
PHE 38ASN 39 0.3463
ASN 39THR 40 0.2377
THR 40GLN 41 0.0265
GLN 41ALA 42 -0.1838
ALA 42THR 43 0.1196
THR 43ASN 44 0.0968
ASN 44ARG 45 0.0161
ARG 45ASN 46 -0.2194
ASN 46THR 47 0.5329
THR 47ASP 48 -0.4282
ASP 48GLY 49 0.7416
GLY 49SER 50 -0.1503
SER 50THR 51 -0.2479
THR 51ASP 52 -0.1513
ASP 52TYR 53 0.0820
TYR 53GLY 54 -0.1223
GLY 54ILE 55 0.4041
ILE 55LEU 56 -0.1540
LEU 56GLN 57 -0.0073
GLN 57ILE 58 -0.0429
ILE 58ASN 59 -0.2587
ASN 59SER 60 0.0643
SER 60ARG 61 -0.0858
ARG 61TRP 62 0.0209
TRP 62TRP 63 -0.0953
TRP 63CYS 64 -0.2477
CYS 64ASN 65 -0.0729
ASN 65ASP 66 0.1491
ASP 66GLY 67 0.1760
GLY 67ARG 68 0.2263
ARG 68THR 69 0.2191
THR 69PRO 70 -0.0831
PRO 70GLY 71 -0.1285
GLY 71SER 72 0.2340
SER 72ARG 73 0.0971
ARG 73ASN 74 0.2082
ASN 74LEU 75 -0.3046
LEU 75CYS 76 0.1621
CYS 76ASN 77 -0.0450
ASN 77ILE 78 0.1001
ILE 78PRO 79 -0.0184
PRO 79CYS 80 0.4164
CYS 80SER 81 -0.2140
SER 81ALA 82 -0.0368
ALA 82LEU 83 0.2356
LEU 83LEU 84 -0.1796
LEU 84SER 85 -0.1187
SER 85SER 86 -0.2308
SER 86ASP 87 -0.1482
ASP 87ILE 88 0.1156
ILE 88THR 89 -0.2587
THR 89ALA 90 0.0760
ALA 90SER 91 0.0884
SER 91VAL 92 -0.0177
VAL 92ASN 93 -0.0569
ASN 93CYS 94 -0.0347
CYS 94ALA 95 0.1064
ALA 95LYS 96 -0.3478
LYS 96LYS 97 -0.0573
LYS 97ILE 98 -0.4872
ILE 98VAL 99 -0.0683
VAL 99SER 100 -0.0730
SER 100ASP 101 0.1250
ASP 101GLY 102 -0.4875
GLY 102ASN 103 -0.1242
ASN 103GLY 104 -0.2298
GLY 104MET 105 -0.0255
MET 105ASN 106 0.0267
ASN 106ALA 107 0.0433
ALA 107TRP 108 0.1753
TRP 108VAL 109 -0.3918
VAL 109ALA 110 0.2126
ALA 110TRP 111 -0.0321
TRP 111ARG 112 0.2792
ARG 112ASN 113 -0.2170
ASN 113ARG 114 0.3835
ARG 114CYS 115 0.0687
CYS 115LYS 116 0.1365
LYS 116GLY 117 0.0278
GLY 117THR 118 -0.0146
THR 118ASP 119 0.5522
ASP 119VAL 120 -0.2909
VAL 120GLN 121 0.6137
GLN 121ALA 122 -0.1146
ALA 122TRP 123 -0.0559
TRP 123ILE 124 0.1975
ILE 124ARG 125 0.1350
ARG 125GLY 126 0.1284
GLY 126CYS 127 -0.1449
CYS 127ARG 128 0.4936
ARG 128LEU 129 -0.0074

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.