This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0594
VAL 2
PHE 3
-0.1134
PHE 3
GLY 4
0.0041
GLY 4
ARG 5
0.3244
ARG 5
CYS 6
0.1725
CYS 6
GLU 7
0.3954
GLU 7
LEU 8
0.0014
LEU 8
ALA 9
0.2561
ALA 9
ALA 10
0.0907
ALA 10
ALA 11
0.2260
ALA 11
MET 12
-0.0539
MET 12
LYS 13
0.1944
LYS 13
ARG 14
0.0277
ARG 14
HIS 15
0.0251
HIS 15
GLY 16
-0.0001
GLY 16
LEU 17
-0.0209
LEU 17
ASP 18
0.1516
ASP 18
ASN 19
-0.0202
ASN 19
TYR 20
-0.1377
TYR 20
ARG 21
-0.0598
ARG 21
GLY 22
0.1064
GLY 22
TYR 23
0.0370
TYR 23
SER 24
0.3359
SER 24
LEU 25
0.0889
LEU 25
GLY 26
-0.1195
GLY 26
ASN 27
0.3818
ASN 27
TRP 28
0.0996
TRP 28
VAL 29
-0.3025
VAL 29
CYS 30
0.3504
CYS 30
ALA 31
0.1365
ALA 31
ALA 32
0.1821
ALA 32
LYS 33
-0.2053
LYS 33
PHE 34
0.2016
PHE 34
GLU 35
0.0730
GLU 35
SER 36
0.0257
SER 36
ASN 37
0.0896
ASN 37
PHE 38
-0.1094
PHE 38
ASN 39
0.3463
ASN 39
THR 40
0.2377
THR 40
GLN 41
0.0265
GLN 41
ALA 42
-0.1838
ALA 42
THR 43
0.1196
THR 43
ASN 44
0.0968
ASN 44
ARG 45
0.0161
ARG 45
ASN 46
-0.2194
ASN 46
THR 47
0.5329
THR 47
ASP 48
-0.4282
ASP 48
GLY 49
0.7416
GLY 49
SER 50
-0.1503
SER 50
THR 51
-0.2479
THR 51
ASP 52
-0.1513
ASP 52
TYR 53
0.0820
TYR 53
GLY 54
-0.1223
GLY 54
ILE 55
0.4041
ILE 55
LEU 56
-0.1540
LEU 56
GLN 57
-0.0073
GLN 57
ILE 58
-0.0429
ILE 58
ASN 59
-0.2587
ASN 59
SER 60
0.0643
SER 60
ARG 61
-0.0858
ARG 61
TRP 62
0.0209
TRP 62
TRP 63
-0.0953
TRP 63
CYS 64
-0.2477
CYS 64
ASN 65
-0.0729
ASN 65
ASP 66
0.1491
ASP 66
GLY 67
0.1760
GLY 67
ARG 68
0.2263
ARG 68
THR 69
0.2191
THR 69
PRO 70
-0.0831
PRO 70
GLY 71
-0.1285
GLY 71
SER 72
0.2340
SER 72
ARG 73
0.0971
ARG 73
ASN 74
0.2082
ASN 74
LEU 75
-0.3046
LEU 75
CYS 76
0.1621
CYS 76
ASN 77
-0.0450
ASN 77
ILE 78
0.1001
ILE 78
PRO 79
-0.0184
PRO 79
CYS 80
0.4164
CYS 80
SER 81
-0.2140
SER 81
ALA 82
-0.0368
ALA 82
LEU 83
0.2356
LEU 83
LEU 84
-0.1796
LEU 84
SER 85
-0.1187
SER 85
SER 86
-0.2308
SER 86
ASP 87
-0.1482
ASP 87
ILE 88
0.1156
ILE 88
THR 89
-0.2587
THR 89
ALA 90
0.0760
ALA 90
SER 91
0.0884
SER 91
VAL 92
-0.0177
VAL 92
ASN 93
-0.0569
ASN 93
CYS 94
-0.0347
CYS 94
ALA 95
0.1064
ALA 95
LYS 96
-0.3478
LYS 96
LYS 97
-0.0573
LYS 97
ILE 98
-0.4872
ILE 98
VAL 99
-0.0683
VAL 99
SER 100
-0.0730
SER 100
ASP 101
0.1250
ASP 101
GLY 102
-0.4875
GLY 102
ASN 103
-0.1242
ASN 103
GLY 104
-0.2298
GLY 104
MET 105
-0.0255
MET 105
ASN 106
0.0267
ASN 106
ALA 107
0.0433
ALA 107
TRP 108
0.1753
TRP 108
VAL 109
-0.3918
VAL 109
ALA 110
0.2126
ALA 110
TRP 111
-0.0321
TRP 111
ARG 112
0.2792
ARG 112
ASN 113
-0.2170
ASN 113
ARG 114
0.3835
ARG 114
CYS 115
0.0687
CYS 115
LYS 116
0.1365
LYS 116
GLY 117
0.0278
GLY 117
THR 118
-0.0146
THR 118
ASP 119
0.5522
ASP 119
VAL 120
-0.2909
VAL 120
GLN 121
0.6137
GLN 121
ALA 122
-0.1146
ALA 122
TRP 123
-0.0559
TRP 123
ILE 124
0.1975
ILE 124
ARG 125
0.1350
ARG 125
GLY 126
0.1284
GLY 126
CYS 127
-0.1449
CYS 127
ARG 128
0.4936
ARG 128
LEU 129
-0.0074
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.