This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.1066
VAL 2
PHE 3
-0.1855
PHE 3
GLY 4
-0.2782
GLY 4
ARG 5
-0.8150
ARG 5
CYS 6
0.3835
CYS 6
GLU 7
-0.4591
GLU 7
LEU 8
0.2427
LEU 8
ALA 9
-0.2627
ALA 9
ALA 10
0.2481
ALA 10
ALA 11
-0.0661
ALA 11
MET 12
0.1570
MET 12
LYS 13
0.1923
LYS 13
ARG 14
0.1129
ARG 14
HIS 15
0.1884
HIS 15
GLY 16
-0.1004
GLY 16
LEU 17
0.3938
LEU 17
ASP 18
-0.0732
ASP 18
ASN 19
-0.3377
ASN 19
TYR 20
-0.0673
TYR 20
ARG 21
-0.1233
ARG 21
GLY 22
-0.2874
GLY 22
TYR 23
-0.1117
TYR 23
SER 24
-0.1786
SER 24
LEU 25
-0.2466
LEU 25
GLY 26
0.1012
GLY 26
ASN 27
0.0758
ASN 27
TRP 28
-0.1296
TRP 28
VAL 29
-0.6217
VAL 29
CYS 30
0.6316
CYS 30
ALA 31
-0.1658
ALA 31
ALA 32
0.0124
ALA 32
LYS 33
-0.0804
LYS 33
PHE 34
0.2848
PHE 34
GLU 35
-0.0270
GLU 35
SER 36
0.0510
SER 36
ASN 37
-0.3277
ASN 37
PHE 38
0.3932
PHE 38
ASN 39
-0.6162
ASN 39
THR 40
-0.1340
THR 40
GLN 41
-0.0583
GLN 41
ALA 42
0.0543
ALA 42
THR 43
0.0794
THR 43
ASN 44
0.0979
ASN 44
ARG 45
0.1936
ARG 45
ASN 46
0.1041
ASN 46
THR 47
0.1185
THR 47
ASP 48
-0.1763
ASP 48
GLY 49
0.1164
GLY 49
SER 50
0.1366
SER 50
THR 51
0.0204
THR 51
ASP 52
0.0500
ASP 52
TYR 53
0.2541
TYR 53
GLY 54
0.1540
GLY 54
ILE 55
-0.0415
ILE 55
LEU 56
-0.0873
LEU 56
GLN 57
0.0343
GLN 57
ILE 58
-0.3245
ILE 58
ASN 59
0.2442
ASN 59
SER 60
-0.0838
SER 60
ARG 61
0.0814
ARG 61
TRP 62
0.2035
TRP 62
TRP 63
0.2565
TRP 63
CYS 64
0.0856
CYS 64
ASN 65
-0.1339
ASN 65
ASP 66
-0.1199
ASP 66
GLY 67
0.3111
GLY 67
ARG 68
-0.0506
ARG 68
THR 69
0.0318
THR 69
PRO 70
0.0777
PRO 70
GLY 71
-0.2370
GLY 71
SER 72
0.4512
SER 72
ARG 73
-0.1008
ARG 73
ASN 74
0.5820
ASN 74
LEU 75
-0.2598
LEU 75
CYS 76
0.3890
CYS 76
ASN 77
0.1101
ASN 77
ILE 78
-0.4161
ILE 78
PRO 79
-0.0509
PRO 79
CYS 80
-0.3334
CYS 80
SER 81
0.1637
SER 81
ALA 82
0.0266
ALA 82
LEU 83
-0.0388
LEU 83
LEU 84
-0.1975
LEU 84
SER 85
0.3515
SER 85
SER 86
0.3724
SER 86
ASP 87
-0.0309
ASP 87
ILE 88
0.0128
ILE 88
THR 89
-0.0747
THR 89
ALA 90
0.2539
ALA 90
SER 91
0.0876
SER 91
VAL 92
-0.2206
VAL 92
ASN 93
-0.0792
ASN 93
CYS 94
0.2941
CYS 94
ALA 95
-0.0210
ALA 95
LYS 96
-0.1690
LYS 96
LYS 97
0.0902
LYS 97
ILE 98
0.0882
ILE 98
VAL 99
-0.1153
VAL 99
SER 100
-0.0962
SER 100
ASP 101
-0.0244
ASP 101
GLY 102
0.5632
GLY 102
ASN 103
0.0444
ASN 103
GLY 104
0.3056
GLY 104
MET 105
-0.5433
MET 105
ASN 106
0.3901
ASN 106
ALA 107
0.1645
ALA 107
TRP 108
-0.5575
TRP 108
VAL 109
1.1585
VAL 109
ALA 110
-0.2421
ALA 110
TRP 111
0.0115
TRP 111
ARG 112
0.0626
ARG 112
ASN 113
0.1569
ASN 113
ARG 114
-0.0921
ARG 114
CYS 115
0.2259
CYS 115
LYS 116
0.0300
LYS 116
GLY 117
-0.0534
GLY 117
THR 118
-0.0259
THR 118
ASP 119
-0.2001
ASP 119
VAL 120
-0.1367
VAL 120
GLN 121
0.0370
GLN 121
ALA 122
-0.0729
ALA 122
TRP 123
-0.2572
TRP 123
ILE 124
0.3001
ILE 124
ARG 125
-0.1958
ARG 125
GLY 126
0.0608
GLY 126
CYS 127
-0.1401
CYS 127
ARG 128
0.2889
ARG 128
LEU 129
-0.0657
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.