CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 30  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.1066
VAL 2PHE 3 -0.1855
PHE 3GLY 4 -0.2782
GLY 4ARG 5 -0.8150
ARG 5CYS 6 0.3835
CYS 6GLU 7 -0.4591
GLU 7LEU 8 0.2427
LEU 8ALA 9 -0.2627
ALA 9ALA 10 0.2481
ALA 10ALA 11 -0.0661
ALA 11MET 12 0.1570
MET 12LYS 13 0.1923
LYS 13ARG 14 0.1129
ARG 14HIS 15 0.1884
HIS 15GLY 16 -0.1004
GLY 16LEU 17 0.3938
LEU 17ASP 18 -0.0732
ASP 18ASN 19 -0.3377
ASN 19TYR 20 -0.0673
TYR 20ARG 21 -0.1233
ARG 21GLY 22 -0.2874
GLY 22TYR 23 -0.1117
TYR 23SER 24 -0.1786
SER 24LEU 25 -0.2466
LEU 25GLY 26 0.1012
GLY 26ASN 27 0.0758
ASN 27TRP 28 -0.1296
TRP 28VAL 29 -0.6217
VAL 29CYS 30 0.6316
CYS 30ALA 31 -0.1658
ALA 31ALA 32 0.0124
ALA 32LYS 33 -0.0804
LYS 33PHE 34 0.2848
PHE 34GLU 35 -0.0270
GLU 35SER 36 0.0510
SER 36ASN 37 -0.3277
ASN 37PHE 38 0.3932
PHE 38ASN 39 -0.6162
ASN 39THR 40 -0.1340
THR 40GLN 41 -0.0583
GLN 41ALA 42 0.0543
ALA 42THR 43 0.0794
THR 43ASN 44 0.0979
ASN 44ARG 45 0.1936
ARG 45ASN 46 0.1041
ASN 46THR 47 0.1185
THR 47ASP 48 -0.1763
ASP 48GLY 49 0.1164
GLY 49SER 50 0.1366
SER 50THR 51 0.0204
THR 51ASP 52 0.0500
ASP 52TYR 53 0.2541
TYR 53GLY 54 0.1540
GLY 54ILE 55 -0.0415
ILE 55LEU 56 -0.0873
LEU 56GLN 57 0.0343
GLN 57ILE 58 -0.3245
ILE 58ASN 59 0.2442
ASN 59SER 60 -0.0838
SER 60ARG 61 0.0814
ARG 61TRP 62 0.2035
TRP 62TRP 63 0.2565
TRP 63CYS 64 0.0856
CYS 64ASN 65 -0.1339
ASN 65ASP 66 -0.1199
ASP 66GLY 67 0.3111
GLY 67ARG 68 -0.0506
ARG 68THR 69 0.0318
THR 69PRO 70 0.0777
PRO 70GLY 71 -0.2370
GLY 71SER 72 0.4512
SER 72ARG 73 -0.1008
ARG 73ASN 74 0.5820
ASN 74LEU 75 -0.2598
LEU 75CYS 76 0.3890
CYS 76ASN 77 0.1101
ASN 77ILE 78 -0.4161
ILE 78PRO 79 -0.0509
PRO 79CYS 80 -0.3334
CYS 80SER 81 0.1637
SER 81ALA 82 0.0266
ALA 82LEU 83 -0.0388
LEU 83LEU 84 -0.1975
LEU 84SER 85 0.3515
SER 85SER 86 0.3724
SER 86ASP 87 -0.0309
ASP 87ILE 88 0.0128
ILE 88THR 89 -0.0747
THR 89ALA 90 0.2539
ALA 90SER 91 0.0876
SER 91VAL 92 -0.2206
VAL 92ASN 93 -0.0792
ASN 93CYS 94 0.2941
CYS 94ALA 95 -0.0210
ALA 95LYS 96 -0.1690
LYS 96LYS 97 0.0902
LYS 97ILE 98 0.0882
ILE 98VAL 99 -0.1153
VAL 99SER 100 -0.0962
SER 100ASP 101 -0.0244
ASP 101GLY 102 0.5632
GLY 102ASN 103 0.0444
ASN 103GLY 104 0.3056
GLY 104MET 105 -0.5433
MET 105ASN 106 0.3901
ASN 106ALA 107 0.1645
ALA 107TRP 108 -0.5575
TRP 108VAL 109 1.1585
VAL 109ALA 110 -0.2421
ALA 110TRP 111 0.0115
TRP 111ARG 112 0.0626
ARG 112ASN 113 0.1569
ASN 113ARG 114 -0.0921
ARG 114CYS 115 0.2259
CYS 115LYS 116 0.0300
LYS 116GLY 117 -0.0534
GLY 117THR 118 -0.0259
THR 118ASP 119 -0.2001
ASP 119VAL 120 -0.1367
VAL 120GLN 121 0.0370
GLN 121ALA 122 -0.0729
ALA 122TRP 123 -0.2572
TRP 123ILE 124 0.3001
ILE 124ARG 125 -0.1958
ARG 125GLY 126 0.0608
GLY 126CYS 127 -0.1401
CYS 127ARG 128 0.2889
ARG 128LEU 129 -0.0657

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.