CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 31  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.0904
VAL 2PHE 3 -0.0991
PHE 3GLY 4 0.0426
GLY 4ARG 5 -0.3186
ARG 5CYS 6 -0.1205
CYS 6GLU 7 -0.6360
GLU 7LEU 8 -0.1224
LEU 8ALA 9 -0.0755
ALA 9ALA 10 0.0178
ALA 10ALA 11 -0.1677
ALA 11MET 12 -0.1173
MET 12LYS 13 -0.1301
LYS 13ARG 14 0.1804
ARG 14HIS 15 -0.3741
HIS 15GLY 16 0.2725
GLY 16LEU 17 -0.0379
LEU 17ASP 18 0.0596
ASP 18ASN 19 -0.0543
ASN 19TYR 20 0.1279
TYR 20ARG 21 0.0615
ARG 21GLY 22 0.0125
GLY 22TYR 23 -0.0838
TYR 23SER 24 0.0816
SER 24LEU 25 -0.0838
LEU 25GLY 26 0.0921
GLY 26ASN 27 -0.1981
ASN 27TRP 28 0.2645
TRP 28VAL 29 -0.1692
VAL 29CYS 30 -0.4378
CYS 30ALA 31 0.1982
ALA 31ALA 32 -0.0680
ALA 32LYS 33 -0.0774
LYS 33PHE 34 -0.3193
PHE 34GLU 35 0.1050
GLU 35SER 36 0.2622
SER 36ASN 37 -0.1357
ASN 37PHE 38 -0.1581
PHE 38ASN 39 0.2269
ASN 39THR 40 0.0010
THR 40GLN 41 -0.1852
GLN 41ALA 42 0.2026
ALA 42THR 43 0.3590
THR 43ASN 44 0.3155
ASN 44ARG 45 -0.0812
ARG 45ASN 46 -0.1070
ASN 46THR 47 0.5236
THR 47ASP 48 -0.6749
ASP 48GLY 49 0.2841
GLY 49SER 50 0.0105
SER 50THR 51 0.0991
THR 51ASP 52 -0.3675
ASP 52TYR 53 0.0120
TYR 53GLY 54 0.0181
GLY 54ILE 55 0.0362
ILE 55LEU 56 0.3711
LEU 56GLN 57 -0.0673
GLN 57ILE 58 0.0806
ILE 58ASN 59 -0.1035
ASN 59SER 60 -0.1541
SER 60ARG 61 0.0063
ARG 61TRP 62 0.1371
TRP 62TRP 63 0.0847
TRP 63CYS 64 0.0253
CYS 64ASN 65 -0.0837
ASN 65ASP 66 -0.0601
ASP 66GLY 67 0.3157
GLY 67ARG 68 0.0711
ARG 68THR 69 0.3202
THR 69PRO 70 -0.2373
PRO 70GLY 71 0.3391
GLY 71SER 72 -0.1033
SER 72ARG 73 0.3363
ARG 73ASN 74 0.1570
ASN 74LEU 75 -0.4072
LEU 75CYS 76 0.2865
CYS 76ASN 77 0.0339
ASN 77ILE 78 -0.1891
ILE 78PRO 79 -0.0365
PRO 79CYS 80 -0.1894
CYS 80SER 81 0.1338
SER 81ALA 82 -0.1377
ALA 82LEU 83 0.0347
LEU 83LEU 84 0.2020
LEU 84SER 85 -0.1219
SER 85SER 86 1.0087
SER 86ASP 87 -0.1951
ASP 87ILE 88 0.0000
ILE 88THR 89 -0.0410
THR 89ALA 90 -0.2123
ALA 90SER 91 -0.1564
SER 91VAL 92 0.1236
VAL 92ASN 93 -0.2794
ASN 93CYS 94 -0.1839
CYS 94ALA 95 -0.0565
ALA 95LYS 96 0.1623
LYS 96LYS 97 -0.2234
LYS 97ILE 98 -0.2483
ILE 98VAL 99 0.3329
VAL 99SER 100 -0.0614
SER 100ASP 101 -0.1677
ASP 101GLY 102 0.3754
GLY 102ASN 103 0.0325
ASN 103GLY 104 0.4357
GLY 104MET 105 0.0339
MET 105ASN 106 -0.2044
ASN 106ALA 107 0.1142
ALA 107TRP 108 -0.1774
TRP 108VAL 109 -0.5504
VAL 109ALA 110 -0.1456
ALA 110TRP 111 0.0647
TRP 111ARG 112 -0.1832
ARG 112ASN 113 -0.1842
ASN 113ARG 114 -0.0767
ARG 114CYS 115 0.0934
CYS 115LYS 116 -0.2377
LYS 116GLY 117 0.1359
GLY 117THR 118 0.0650
THR 118ASP 119 0.3511
ASP 119VAL 120 0.2746
VAL 120GLN 121 0.0545
GLN 121ALA 122 0.0313
ALA 122TRP 123 0.1512
TRP 123ILE 124 0.0786
ILE 124ARG 125 0.1306
ARG 125GLY 126 0.0035
GLY 126CYS 127 0.0900
CYS 127ARG 128 -0.6172
ARG 128LEU 129 0.0803

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.