This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.3937
VAL 2
PHE 3
0.4815
PHE 3
GLY 4
0.6087
GLY 4
ARG 5
0.7140
ARG 5
CYS 6
0.7584
CYS 6
GLU 7
0.7573
GLU 7
LEU 8
0.3197
LEU 8
ALA 9
0.6478
ALA 9
ALA 10
0.7991
ALA 10
ALA 11
0.8582
ALA 11
MET 12
0.1443
MET 12
LYS 13
0.6674
LYS 13
ARG 14
0.4267
ARG 14
HIS 15
0.8234
HIS 15
GLY 16
0.1666
GLY 16
LEU 17
0.4070
LEU 17
ASP 18
0.7016
ASP 18
ASN 19
-0.1316
ASN 19
TYR 20
0.7552
TYR 20
ARG 21
0.1833
ARG 21
GLY 22
0.6831
GLY 22
TYR 23
0.1142
TYR 23
SER 24
0.5812
SER 24
LEU 25
0.0998
LEU 25
GLY 26
0.5351
GLY 26
ASN 27
0.5058
ASN 27
TRP 28
0.6661
TRP 28
VAL 29
0.2168
VAL 29
CYS 30
0.6361
CYS 30
ALA 31
0.5370
ALA 31
ALA 32
0.5623
ALA 32
LYS 33
0.4728
LYS 33
PHE 34
0.6451
PHE 34
GLU 35
0.7601
GLU 35
SER 36
0.5781
SER 36
ASN 37
0.0069
ASN 37
PHE 38
0.3219
PHE 38
ASN 39
0.4779
ASN 39
THR 40
0.1356
THR 40
GLN 41
0.1963
GLN 41
ALA 42
0.2136
ALA 42
THR 43
0.6762
THR 43
ASN 44
0.9942
ASN 44
ARG 45
1.3463
ARG 45
ASN 46
1.2197
ASN 46
THR 47
1.5027
THR 47
ASP 48
0.7569
ASP 48
GLY 49
1.3659
GLY 49
SER 50
1.3731
SER 50
THR 51
1.3124
THR 51
ASP 52
1.1614
ASP 52
TYR 53
0.7135
TYR 53
GLY 54
0.6086
GLY 54
ILE 55
0.0291
ILE 55
LEU 56
0.0597
LEU 56
GLN 57
-0.0870
GLN 57
ILE 58
0.4894
ILE 58
ASN 59
0.9857
ASN 59
SER 60
1.0880
SER 60
ARG 61
1.1568
ARG 61
TRP 62
1.0544
TRP 62
TRP 63
1.2325
TRP 63
CYS 64
0.7639
CYS 64
ASN 65
1.0821
ASN 65
ASP 66
0.2713
ASP 66
GLY 67
1.3159
GLY 67
ARG 68
1.1015
ARG 68
THR 69
1.1557
THR 69
PRO 70
1.3245
PRO 70
GLY 71
0.9684
GLY 71
SER 72
1.3619
SER 72
ARG 73
0.7475
ARG 73
ASN 74
1.1466
ASN 74
LEU 75
0.9951
LEU 75
CYS 76
0.7048
CYS 76
ASN 77
1.0174
ASN 77
ILE 78
0.0793
ILE 78
PRO 79
0.7535
PRO 79
CYS 80
0.7449
CYS 80
SER 81
0.3018
SER 81
ALA 82
0.7634
ALA 82
LEU 83
0.6498
LEU 83
LEU 84
-0.1539
LEU 84
SER 85
0.5231
SER 85
SER 86
0.6647
SER 86
ASP 87
-0.4234
ASP 87
ILE 88
-0.0080
ILE 88
THR 89
-0.1666
THR 89
ALA 90
0.8555
ALA 90
SER 91
0.1584
SER 91
VAL 92
0.4052
VAL 92
ASN 93
0.3542
ASN 93
CYS 94
0.0305
CYS 94
ALA 95
0.2795
ALA 95
LYS 96
0.0200
LYS 96
LYS 97
0.2480
LYS 97
ILE 98
0.0361
ILE 98
VAL 99
-0.1111
VAL 99
SER 100
0.4486
SER 100
ASP 101
0.0712
ASP 101
GLY 102
0.1780
GLY 102
ASN 103
0.8137
ASN 103
GLY 104
0.4632
GLY 104
MET 105
0.3301
MET 105
ASN 106
0.7004
ASN 106
ALA 107
0.4225
ALA 107
TRP 108
0.4957
TRP 108
VAL 109
0.6773
VAL 109
ALA 110
0.4882
ALA 110
TRP 111
0.4907
TRP 111
ARG 112
0.6798
ARG 112
ASN 113
0.5467
ASN 113
ARG 114
0.5237
ARG 114
CYS 115
0.5440
CYS 115
LYS 116
0.2195
LYS 116
GLY 117
0.8672
GLY 117
THR 118
0.2616
THR 118
ASP 119
0.5998
ASP 119
VAL 120
0.9217
VAL 120
GLN 121
0.7157
GLN 121
ALA 122
0.3760
ALA 122
TRP 123
0.9737
TRP 123
ILE 124
0.6844
ILE 124
ARG 125
0.9019
ARG 125
GLY 126
0.3947
GLY 126
CYS 127
0.9987
CYS 127
ARG 128
1.4624
ARG 128
LEU 129
1.2624
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.