CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0993
VAL 2PHE 3 0.0978
PHE 3GLY 4 0.0198
GLY 4ARG 5 0.0019
ARG 5CYS 6 0.1759
CYS 6GLU 7 0.0606
GLU 7LEU 8 0.0019
LEU 8ALA 9 0.0743
ALA 9ALA 10 -0.0223
ALA 10ALA 11 0.0347
ALA 11MET 12 0.0231
MET 12LYS 13 -0.0094
LYS 13ARG 14 0.0127
ARG 14HIS 15 -0.1029
HIS 15GLY 16 0.1616
GLY 16LEU 17 0.0334
LEU 17ASP 18 -0.0751
ASP 18ASN 19 0.0225
ASN 19TYR 20 -0.0861
TYR 20ARG 21 0.0429
ARG 21GLY 22 -0.0516
GLY 22TYR 23 -0.0096
TYR 23SER 24 -0.0403
SER 24LEU 25 0.0337
LEU 25GLY 26 -0.0038
GLY 26ASN 27 -0.0029
ASN 27TRP 28 0.0071
TRP 28VAL 29 0.0295
VAL 29CYS 30 -0.0072
CYS 30ALA 31 0.0362
ALA 31ALA 32 -0.0578
ALA 32LYS 33 0.0289
LYS 33PHE 34 -0.0324
PHE 34GLU 35 0.1205
GLU 35SER 36 -0.2770
SER 36ASN 37 0.1689
ASN 37PHE 38 -0.0056
PHE 38ASN 39 0.0717
ASN 39THR 40 -0.1222
THR 40GLN 41 0.0547
GLN 41ALA 42 0.0622
ALA 42THR 43 0.4228
THR 43ASN 44 0.1546
ASN 44ARG 45 0.0942
ARG 45ASN 46 0.0828
ASN 46THR 47 -0.0414
THR 47ASP 48 -0.0709
ASP 48GLY 49 -0.0364
GLY 49SER 50 -0.0201
SER 50THR 51 0.1680
THR 51ASP 52 -0.0135
ASP 52TYR 53 -0.0175
TYR 53GLY 54 0.1406
GLY 54ILE 55 0.1180
ILE 55LEU 56 -0.0593
LEU 56GLN 57 -0.0482
GLN 57ILE 58 0.2161
ILE 58ASN 59 -0.0542
ASN 59SER 60 -0.0211
SER 60ARG 61 0.0835
ARG 61TRP 62 -0.1509
TRP 62TRP 63 -0.1030
TRP 63CYS 64 -0.0005
CYS 64ASN 65 0.0004
ASN 65ASP 66 0.0609
ASP 66GLY 67 -0.0543
GLY 67ARG 68 0.0496
ARG 68THR 69 -0.0671
THR 69PRO 70 0.0463
PRO 70GLY 71 -0.0583
GLY 71SER 72 -0.0315
SER 72ARG 73 0.0109
ARG 73ASN 74 -0.1349
ASN 74LEU 75 0.0699
LEU 75CYS 76 -0.1817
CYS 76ASN 77 0.0690
ASN 77ILE 78 -0.0806
ILE 78PRO 79 0.1132
PRO 79CYS 80 0.0106
CYS 80SER 81 -0.0256
SER 81ALA 82 0.1208
ALA 82LEU 83 -0.0513
LEU 83LEU 84 -0.0282
LEU 84SER 85 0.2058
SER 85SER 86 -0.0950
SER 86ASP 87 0.0122
ASP 87ILE 88 -0.0077
ILE 88THR 89 -0.0440
THR 89ALA 90 -0.1010
ALA 90SER 91 -0.0039
SER 91VAL 92 0.0298
VAL 92ASN 93 -0.1134
ASN 93CYS 94 -0.1058
CYS 94ALA 95 0.0366
ALA 95LYS 96 -0.0150
LYS 96LYS 97 -0.1587
LYS 97ILE 98 0.2288
ILE 98VAL 99 -0.1501
VAL 99SER 100 0.0344
SER 100ASP 101 -0.1893
ASP 101GLY 102 -0.0221
GLY 102ASN 103 0.0109
ASN 103GLY 104 0.0195
GLY 104MET 105 -0.0092
MET 105ASN 106 0.0057
ASN 106ALA 107 0.0926
ALA 107TRP 108 -0.0366
TRP 108VAL 109 0.1698
VAL 109ALA 110 0.0109
ALA 110TRP 111 -0.0327
TRP 111ARG 112 -0.0220
ARG 112ASN 113 0.0648
ASN 113ARG 114 0.0010
ARG 114CYS 115 -0.0009
CYS 115LYS 116 0.0003
LYS 116GLY 117 0.0178
GLY 117THR 118 0.0133
THR 118ASP 119 0.0086
ASP 119VAL 120 -0.0029
VAL 120GLN 121 0.0078
GLN 121ALA 122 -0.0088
ALA 122TRP 123 0.0075
TRP 123ILE 124 0.0209
ILE 124ARG 125 -0.0242
ARG 125GLY 126 -0.0088
GLY 126CYS 127 -0.0264
CYS 127ARG 128 0.0890
ARG 128LEU 129 -0.1816

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.