This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0993
VAL 2
PHE 3
0.0978
PHE 3
GLY 4
0.0198
GLY 4
ARG 5
0.0019
ARG 5
CYS 6
0.1759
CYS 6
GLU 7
0.0606
GLU 7
LEU 8
0.0019
LEU 8
ALA 9
0.0743
ALA 9
ALA 10
-0.0223
ALA 10
ALA 11
0.0347
ALA 11
MET 12
0.0231
MET 12
LYS 13
-0.0094
LYS 13
ARG 14
0.0127
ARG 14
HIS 15
-0.1029
HIS 15
GLY 16
0.1616
GLY 16
LEU 17
0.0334
LEU 17
ASP 18
-0.0751
ASP 18
ASN 19
0.0225
ASN 19
TYR 20
-0.0861
TYR 20
ARG 21
0.0429
ARG 21
GLY 22
-0.0516
GLY 22
TYR 23
-0.0096
TYR 23
SER 24
-0.0403
SER 24
LEU 25
0.0337
LEU 25
GLY 26
-0.0038
GLY 26
ASN 27
-0.0029
ASN 27
TRP 28
0.0071
TRP 28
VAL 29
0.0295
VAL 29
CYS 30
-0.0072
CYS 30
ALA 31
0.0362
ALA 31
ALA 32
-0.0578
ALA 32
LYS 33
0.0289
LYS 33
PHE 34
-0.0324
PHE 34
GLU 35
0.1205
GLU 35
SER 36
-0.2770
SER 36
ASN 37
0.1689
ASN 37
PHE 38
-0.0056
PHE 38
ASN 39
0.0717
ASN 39
THR 40
-0.1222
THR 40
GLN 41
0.0547
GLN 41
ALA 42
0.0622
ALA 42
THR 43
0.4228
THR 43
ASN 44
0.1546
ASN 44
ARG 45
0.0942
ARG 45
ASN 46
0.0828
ASN 46
THR 47
-0.0414
THR 47
ASP 48
-0.0709
ASP 48
GLY 49
-0.0364
GLY 49
SER 50
-0.0201
SER 50
THR 51
0.1680
THR 51
ASP 52
-0.0135
ASP 52
TYR 53
-0.0175
TYR 53
GLY 54
0.1406
GLY 54
ILE 55
0.1180
ILE 55
LEU 56
-0.0593
LEU 56
GLN 57
-0.0482
GLN 57
ILE 58
0.2161
ILE 58
ASN 59
-0.0542
ASN 59
SER 60
-0.0211
SER 60
ARG 61
0.0835
ARG 61
TRP 62
-0.1509
TRP 62
TRP 63
-0.1030
TRP 63
CYS 64
-0.0005
CYS 64
ASN 65
0.0004
ASN 65
ASP 66
0.0609
ASP 66
GLY 67
-0.0543
GLY 67
ARG 68
0.0496
ARG 68
THR 69
-0.0671
THR 69
PRO 70
0.0463
PRO 70
GLY 71
-0.0583
GLY 71
SER 72
-0.0315
SER 72
ARG 73
0.0109
ARG 73
ASN 74
-0.1349
ASN 74
LEU 75
0.0699
LEU 75
CYS 76
-0.1817
CYS 76
ASN 77
0.0690
ASN 77
ILE 78
-0.0806
ILE 78
PRO 79
0.1132
PRO 79
CYS 80
0.0106
CYS 80
SER 81
-0.0256
SER 81
ALA 82
0.1208
ALA 82
LEU 83
-0.0513
LEU 83
LEU 84
-0.0282
LEU 84
SER 85
0.2058
SER 85
SER 86
-0.0950
SER 86
ASP 87
0.0122
ASP 87
ILE 88
-0.0077
ILE 88
THR 89
-0.0440
THR 89
ALA 90
-0.1010
ALA 90
SER 91
-0.0039
SER 91
VAL 92
0.0298
VAL 92
ASN 93
-0.1134
ASN 93
CYS 94
-0.1058
CYS 94
ALA 95
0.0366
ALA 95
LYS 96
-0.0150
LYS 96
LYS 97
-0.1587
LYS 97
ILE 98
0.2288
ILE 98
VAL 99
-0.1501
VAL 99
SER 100
0.0344
SER 100
ASP 101
-0.1893
ASP 101
GLY 102
-0.0221
GLY 102
ASN 103
0.0109
ASN 103
GLY 104
0.0195
GLY 104
MET 105
-0.0092
MET 105
ASN 106
0.0057
ASN 106
ALA 107
0.0926
ALA 107
TRP 108
-0.0366
TRP 108
VAL 109
0.1698
VAL 109
ALA 110
0.0109
ALA 110
TRP 111
-0.0327
TRP 111
ARG 112
-0.0220
ARG 112
ASN 113
0.0648
ASN 113
ARG 114
0.0010
ARG 114
CYS 115
-0.0009
CYS 115
LYS 116
0.0003
LYS 116
GLY 117
0.0178
GLY 117
THR 118
0.0133
THR 118
ASP 119
0.0086
ASP 119
VAL 120
-0.0029
VAL 120
GLN 121
0.0078
GLN 121
ALA 122
-0.0088
ALA 122
TRP 123
0.0075
TRP 123
ILE 124
0.0209
ILE 124
ARG 125
-0.0242
ARG 125
GLY 126
-0.0088
GLY 126
CYS 127
-0.0264
CYS 127
ARG 128
0.0890
ARG 128
LEU 129
-0.1816
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.