CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.0080
VAL 2PHE 3 -0.0292
PHE 3GLY 4 -0.0245
GLY 4ARG 5 0.0545
ARG 5CYS 6 -0.3797
CYS 6GLU 7 -0.0356
GLU 7LEU 8 -0.0384
LEU 8ALA 9 -0.0269
ALA 9ALA 10 -0.0243
ALA 10ALA 11 -0.3162
ALA 11MET 12 0.0087
MET 12LYS 13 0.0055
LYS 13ARG 14 0.0249
ARG 14HIS 15 -0.0353
HIS 15GLY 16 0.0703
GLY 16LEU 17 -0.0168
LEU 17ASP 18 0.0456
ASP 18ASN 19 0.0410
ASN 19TYR 20 0.0281
TYR 20ARG 21 0.0174
ARG 21GLY 22 0.0068
GLY 22TYR 23 -0.0245
TYR 23SER 24 0.0603
SER 24LEU 25 0.0141
LEU 25GLY 26 -0.0133
GLY 26ASN 27 0.0610
ASN 27TRP 28 -0.0120
TRP 28VAL 29 0.0030
VAL 29CYS 30 -0.0030
CYS 30ALA 31 -0.0209
ALA 31ALA 32 0.0051
ALA 32LYS 33 0.0198
LYS 33PHE 34 -0.0032
PHE 34GLU 35 -0.1252
GLU 35SER 36 -0.0082
SER 36ASN 37 -0.0234
ASN 37PHE 38 -0.0247
PHE 38ASN 39 -0.0267
ASN 39THR 40 -0.0095
THR 40GLN 41 0.0100
GLN 41ALA 42 0.0226
ALA 42THR 43 0.0240
THR 43ASN 44 0.0484
ASN 44ARG 45 -0.1160
ARG 45ASN 46 0.0574
ASN 46THR 47 -0.1469
THR 47ASP 48 0.0089
ASP 48GLY 49 0.0225
GLY 49SER 50 -0.0443
SER 50THR 51 0.0367
THR 51ASP 52 -0.1347
ASP 52TYR 53 -0.0116
TYR 53GLY 54 -0.0341
GLY 54ILE 55 -0.0520
ILE 55LEU 56 -0.0045
LEU 56GLN 57 -0.1410
GLN 57ILE 58 0.0536
ILE 58ASN 59 -0.1568
ASN 59SER 60 -0.0517
SER 60ARG 61 0.0351
ARG 61TRP 62 -0.0466
TRP 62TRP 63 -0.0257
TRP 63CYS 64 -0.0253
CYS 64ASN 65 -0.0248
ASN 65ASP 66 0.0398
ASP 66GLY 67 -0.0645
GLY 67ARG 68 0.0909
ARG 68THR 69 -0.0588
THR 69PRO 70 0.0192
PRO 70GLY 71 -0.0288
GLY 71SER 72 0.0495
SER 72ARG 73 0.0035
ARG 73ASN 74 -0.0269
ASN 74LEU 75 0.0311
LEU 75CYS 76 -0.0527
CYS 76ASN 77 0.0083
ASN 77ILE 78 -0.0538
ILE 78PRO 79 0.0745
PRO 79CYS 80 -0.0441
CYS 80SER 81 -0.0065
SER 81ALA 82 0.1082
ALA 82LEU 83 -0.0422
LEU 83LEU 84 -0.0127
LEU 84SER 85 0.0995
SER 85SER 86 -0.0191
SER 86ASP 87 0.0067
ASP 87ILE 88 -0.0097
ILE 88THR 89 -0.0073
THR 89ALA 90 0.0245
ALA 90SER 91 0.0087
SER 91VAL 92 0.0360
VAL 92ASN 93 -0.0263
ASN 93CYS 94 -0.0526
CYS 94ALA 95 0.0540
ALA 95LYS 96 -0.0031
LYS 96LYS 97 -0.0201
LYS 97ILE 98 0.0742
ILE 98VAL 99 -0.0404
VAL 99SER 100 0.0130
SER 100ASP 101 -0.0523
ASP 101GLY 102 -0.0033
GLY 102ASN 103 0.0145
ASN 103GLY 104 0.0268
GLY 104MET 105 0.0184
MET 105ASN 106 0.0112
ASN 106ALA 107 -0.0384
ALA 107TRP 108 0.0083
TRP 108VAL 109 0.0409
VAL 109ALA 110 0.0044
ALA 110TRP 111 -0.0060
TRP 111ARG 112 0.0194
ARG 112ASN 113 0.0249
ASN 113ARG 114 0.0167
ARG 114CYS 115 0.0173
CYS 115LYS 116 0.0241
LYS 116GLY 117 -0.0075
GLY 117THR 118 0.0355
THR 118ASP 119 0.0753
ASP 119VAL 120 -0.0285
VAL 120GLN 121 0.0560
GLN 121ALA 122 -0.0455
ALA 122TRP 123 -0.0472
TRP 123ILE 124 0.1091
ILE 124ARG 125 -0.0671
ARG 125GLY 126 0.0879
GLY 126CYS 127 -0.1859
CYS 127ARG 128 0.0555
ARG 128LEU 129 0.0862

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.