This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0080
VAL 2
PHE 3
-0.0292
PHE 3
GLY 4
-0.0245
GLY 4
ARG 5
0.0545
ARG 5
CYS 6
-0.3797
CYS 6
GLU 7
-0.0356
GLU 7
LEU 8
-0.0384
LEU 8
ALA 9
-0.0269
ALA 9
ALA 10
-0.0243
ALA 10
ALA 11
-0.3162
ALA 11
MET 12
0.0087
MET 12
LYS 13
0.0055
LYS 13
ARG 14
0.0249
ARG 14
HIS 15
-0.0353
HIS 15
GLY 16
0.0703
GLY 16
LEU 17
-0.0168
LEU 17
ASP 18
0.0456
ASP 18
ASN 19
0.0410
ASN 19
TYR 20
0.0281
TYR 20
ARG 21
0.0174
ARG 21
GLY 22
0.0068
GLY 22
TYR 23
-0.0245
TYR 23
SER 24
0.0603
SER 24
LEU 25
0.0141
LEU 25
GLY 26
-0.0133
GLY 26
ASN 27
0.0610
ASN 27
TRP 28
-0.0120
TRP 28
VAL 29
0.0030
VAL 29
CYS 30
-0.0030
CYS 30
ALA 31
-0.0209
ALA 31
ALA 32
0.0051
ALA 32
LYS 33
0.0198
LYS 33
PHE 34
-0.0032
PHE 34
GLU 35
-0.1252
GLU 35
SER 36
-0.0082
SER 36
ASN 37
-0.0234
ASN 37
PHE 38
-0.0247
PHE 38
ASN 39
-0.0267
ASN 39
THR 40
-0.0095
THR 40
GLN 41
0.0100
GLN 41
ALA 42
0.0226
ALA 42
THR 43
0.0240
THR 43
ASN 44
0.0484
ASN 44
ARG 45
-0.1160
ARG 45
ASN 46
0.0574
ASN 46
THR 47
-0.1469
THR 47
ASP 48
0.0089
ASP 48
GLY 49
0.0225
GLY 49
SER 50
-0.0443
SER 50
THR 51
0.0367
THR 51
ASP 52
-0.1347
ASP 52
TYR 53
-0.0116
TYR 53
GLY 54
-0.0341
GLY 54
ILE 55
-0.0520
ILE 55
LEU 56
-0.0045
LEU 56
GLN 57
-0.1410
GLN 57
ILE 58
0.0536
ILE 58
ASN 59
-0.1568
ASN 59
SER 60
-0.0517
SER 60
ARG 61
0.0351
ARG 61
TRP 62
-0.0466
TRP 62
TRP 63
-0.0257
TRP 63
CYS 64
-0.0253
CYS 64
ASN 65
-0.0248
ASN 65
ASP 66
0.0398
ASP 66
GLY 67
-0.0645
GLY 67
ARG 68
0.0909
ARG 68
THR 69
-0.0588
THR 69
PRO 70
0.0192
PRO 70
GLY 71
-0.0288
GLY 71
SER 72
0.0495
SER 72
ARG 73
0.0035
ARG 73
ASN 74
-0.0269
ASN 74
LEU 75
0.0311
LEU 75
CYS 76
-0.0527
CYS 76
ASN 77
0.0083
ASN 77
ILE 78
-0.0538
ILE 78
PRO 79
0.0745
PRO 79
CYS 80
-0.0441
CYS 80
SER 81
-0.0065
SER 81
ALA 82
0.1082
ALA 82
LEU 83
-0.0422
LEU 83
LEU 84
-0.0127
LEU 84
SER 85
0.0995
SER 85
SER 86
-0.0191
SER 86
ASP 87
0.0067
ASP 87
ILE 88
-0.0097
ILE 88
THR 89
-0.0073
THR 89
ALA 90
0.0245
ALA 90
SER 91
0.0087
SER 91
VAL 92
0.0360
VAL 92
ASN 93
-0.0263
ASN 93
CYS 94
-0.0526
CYS 94
ALA 95
0.0540
ALA 95
LYS 96
-0.0031
LYS 96
LYS 97
-0.0201
LYS 97
ILE 98
0.0742
ILE 98
VAL 99
-0.0404
VAL 99
SER 100
0.0130
SER 100
ASP 101
-0.0523
ASP 101
GLY 102
-0.0033
GLY 102
ASN 103
0.0145
ASN 103
GLY 104
0.0268
GLY 104
MET 105
0.0184
MET 105
ASN 106
0.0112
ASN 106
ALA 107
-0.0384
ALA 107
TRP 108
0.0083
TRP 108
VAL 109
0.0409
VAL 109
ALA 110
0.0044
ALA 110
TRP 111
-0.0060
TRP 111
ARG 112
0.0194
ARG 112
ASN 113
0.0249
ASN 113
ARG 114
0.0167
ARG 114
CYS 115
0.0173
CYS 115
LYS 116
0.0241
LYS 116
GLY 117
-0.0075
GLY 117
THR 118
0.0355
THR 118
ASP 119
0.0753
ASP 119
VAL 120
-0.0285
VAL 120
GLN 121
0.0560
GLN 121
ALA 122
-0.0455
ALA 122
TRP 123
-0.0472
TRP 123
ILE 124
0.1091
ILE 124
ARG 125
-0.0671
ARG 125
GLY 126
0.0879
GLY 126
CYS 127
-0.1859
CYS 127
ARG 128
0.0555
ARG 128
LEU 129
0.0862
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.