This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.3691
VAL 2
PHE 3
0.2159
PHE 3
GLY 4
0.8883
GLY 4
ARG 5
0.8486
ARG 5
CYS 6
0.4742
CYS 6
GLU 7
1.0416
GLU 7
LEU 8
0.4166
LEU 8
ALA 9
0.8214
ALA 9
ALA 10
0.2628
ALA 10
ALA 11
0.6904
ALA 11
MET 12
0.4292
MET 12
LYS 13
0.7343
LYS 13
ARG 14
0.7981
ARG 14
HIS 15
-0.2780
HIS 15
GLY 16
0.6872
GLY 16
LEU 17
0.4750
LEU 17
ASP 18
0.6556
ASP 18
ASN 19
0.1168
ASN 19
TYR 20
0.4501
TYR 20
ARG 21
0.2632
ARG 21
GLY 22
0.3643
GLY 22
TYR 23
0.4702
TYR 23
SER 24
0.4042
SER 24
LEU 25
0.5736
LEU 25
GLY 26
0.5157
GLY 26
ASN 27
0.5344
ASN 27
TRP 28
0.6075
TRP 28
VAL 29
0.4188
VAL 29
CYS 30
-0.0725
CYS 30
ALA 31
0.7817
ALA 31
ALA 32
0.0429
ALA 32
LYS 33
0.5535
LYS 33
PHE 34
-0.0244
PHE 34
GLU 35
1.0325
GLU 35
SER 36
-0.6342
SER 36
ASN 37
0.8538
ASN 37
PHE 38
-0.2839
PHE 38
ASN 39
0.8166
ASN 39
THR 40
0.4757
THR 40
GLN 41
-0.0395
GLN 41
ALA 42
0.2038
ALA 42
THR 43
1.2733
THR 43
ASN 44
0.9556
ASN 44
ARG 45
1.2459
ARG 45
ASN 46
1.3030
ASN 46
THR 47
0.9841
THR 47
ASP 48
1.6724
ASP 48
GLY 49
1.4393
GLY 49
SER 50
0.9736
SER 50
THR 51
1.1302
THR 51
ASP 52
1.1683
ASP 52
TYR 53
0.0852
TYR 53
GLY 54
0.9939
GLY 54
ILE 55
0.7060
ILE 55
LEU 56
-0.1358
LEU 56
GLN 57
0.5630
GLN 57
ILE 58
0.5161
ILE 58
ASN 59
-0.2114
ASN 59
SER 60
1.2273
SER 60
ARG 61
1.2839
ARG 61
TRP 62
0.8129
TRP 62
TRP 63
1.3228
TRP 63
CYS 64
0.8063
CYS 64
ASN 65
1.2287
ASN 65
ASP 66
1.1163
ASP 66
GLY 67
1.5805
GLY 67
ARG 68
0.2605
ARG 68
THR 69
1.5192
THR 69
PRO 70
1.4605
PRO 70
GLY 71
1.4108
GLY 71
SER 72
1.2437
SER 72
ARG 73
0.9149
ARG 73
ASN 74
1.4211
ASN 74
LEU 75
0.8709
LEU 75
CYS 76
1.0443
CYS 76
ASN 77
0.7312
ASN 77
ILE 78
0.6330
ILE 78
PRO 79
0.4320
PRO 79
CYS 80
0.7432
CYS 80
SER 81
0.1609
SER 81
ALA 82
0.6384
ALA 82
LEU 83
0.4419
LEU 83
LEU 84
0.0008
LEU 84
SER 85
0.5782
SER 85
SER 86
0.8337
SER 86
ASP 87
0.0857
ASP 87
ILE 88
0.2560
ILE 88
THR 89
0.3560
THR 89
ALA 90
0.2622
ALA 90
SER 91
0.1012
SER 91
VAL 92
-0.0494
VAL 92
ASN 93
0.0801
ASN 93
CYS 94
0.3092
CYS 94
ALA 95
-0.3072
ALA 95
LYS 96
0.2536
LYS 96
LYS 97
0.1593
LYS 97
ILE 98
0.2465
ILE 98
VAL 99
0.2158
VAL 99
SER 100
0.2863
SER 100
ASP 101
0.4127
ASP 101
GLY 102
0.5157
GLY 102
ASN 103
1.0256
ASN 103
GLY 104
0.6005
GLY 104
MET 105
-0.1633
MET 105
ASN 106
0.6148
ASN 106
ALA 107
0.2501
ALA 107
TRP 108
-0.0873
TRP 108
VAL 109
0.4378
VAL 109
ALA 110
0.7084
ALA 110
TRP 111
0.5262
TRP 111
ARG 112
0.6143
ARG 112
ASN 113
0.3841
ASN 113
ARG 114
0.8333
ARG 114
CYS 115
0.4650
CYS 115
LYS 116
0.7619
LYS 116
GLY 117
0.8529
GLY 117
THR 118
0.9542
THR 118
ASP 119
1.2309
ASP 119
VAL 120
1.1785
VAL 120
GLN 121
1.0162
GLN 121
ALA 122
1.0244
ALA 122
TRP 123
1.2249
TRP 123
ILE 124
0.6315
ILE 124
ARG 125
1.2348
ARG 125
GLY 126
0.9671
GLY 126
CYS 127
1.2431
CYS 127
ARG 128
1.3402
ARG 128
LEU 129
0.7799
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.