CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.3691
VAL 2PHE 3 0.2159
PHE 3GLY 4 0.8883
GLY 4ARG 5 0.8486
ARG 5CYS 6 0.4742
CYS 6GLU 7 1.0416
GLU 7LEU 8 0.4166
LEU 8ALA 9 0.8214
ALA 9ALA 10 0.2628
ALA 10ALA 11 0.6904
ALA 11MET 12 0.4292
MET 12LYS 13 0.7343
LYS 13ARG 14 0.7981
ARG 14HIS 15 -0.2780
HIS 15GLY 16 0.6872
GLY 16LEU 17 0.4750
LEU 17ASP 18 0.6556
ASP 18ASN 19 0.1168
ASN 19TYR 20 0.4501
TYR 20ARG 21 0.2632
ARG 21GLY 22 0.3643
GLY 22TYR 23 0.4702
TYR 23SER 24 0.4042
SER 24LEU 25 0.5736
LEU 25GLY 26 0.5157
GLY 26ASN 27 0.5344
ASN 27TRP 28 0.6075
TRP 28VAL 29 0.4188
VAL 29CYS 30 -0.0725
CYS 30ALA 31 0.7817
ALA 31ALA 32 0.0429
ALA 32LYS 33 0.5535
LYS 33PHE 34 -0.0244
PHE 34GLU 35 1.0325
GLU 35SER 36 -0.6342
SER 36ASN 37 0.8538
ASN 37PHE 38 -0.2839
PHE 38ASN 39 0.8166
ASN 39THR 40 0.4757
THR 40GLN 41 -0.0395
GLN 41ALA 42 0.2038
ALA 42THR 43 1.2733
THR 43ASN 44 0.9556
ASN 44ARG 45 1.2459
ARG 45ASN 46 1.3030
ASN 46THR 47 0.9841
THR 47ASP 48 1.6724
ASP 48GLY 49 1.4393
GLY 49SER 50 0.9736
SER 50THR 51 1.1302
THR 51ASP 52 1.1683
ASP 52TYR 53 0.0852
TYR 53GLY 54 0.9939
GLY 54ILE 55 0.7060
ILE 55LEU 56 -0.1358
LEU 56GLN 57 0.5630
GLN 57ILE 58 0.5161
ILE 58ASN 59 -0.2114
ASN 59SER 60 1.2273
SER 60ARG 61 1.2839
ARG 61TRP 62 0.8129
TRP 62TRP 63 1.3228
TRP 63CYS 64 0.8063
CYS 64ASN 65 1.2287
ASN 65ASP 66 1.1163
ASP 66GLY 67 1.5805
GLY 67ARG 68 0.2605
ARG 68THR 69 1.5192
THR 69PRO 70 1.4605
PRO 70GLY 71 1.4108
GLY 71SER 72 1.2437
SER 72ARG 73 0.9149
ARG 73ASN 74 1.4211
ASN 74LEU 75 0.8709
LEU 75CYS 76 1.0443
CYS 76ASN 77 0.7312
ASN 77ILE 78 0.6330
ILE 78PRO 79 0.4320
PRO 79CYS 80 0.7432
CYS 80SER 81 0.1609
SER 81ALA 82 0.6384
ALA 82LEU 83 0.4419
LEU 83LEU 84 0.0008
LEU 84SER 85 0.5782
SER 85SER 86 0.8337
SER 86ASP 87 0.0857
ASP 87ILE 88 0.2560
ILE 88THR 89 0.3560
THR 89ALA 90 0.2622
ALA 90SER 91 0.1012
SER 91VAL 92 -0.0494
VAL 92ASN 93 0.0801
ASN 93CYS 94 0.3092
CYS 94ALA 95 -0.3072
ALA 95LYS 96 0.2536
LYS 96LYS 97 0.1593
LYS 97ILE 98 0.2465
ILE 98VAL 99 0.2158
VAL 99SER 100 0.2863
SER 100ASP 101 0.4127
ASP 101GLY 102 0.5157
GLY 102ASN 103 1.0256
ASN 103GLY 104 0.6005
GLY 104MET 105 -0.1633
MET 105ASN 106 0.6148
ASN 106ALA 107 0.2501
ALA 107TRP 108 -0.0873
TRP 108VAL 109 0.4378
VAL 109ALA 110 0.7084
ALA 110TRP 111 0.5262
TRP 111ARG 112 0.6143
ARG 112ASN 113 0.3841
ASN 113ARG 114 0.8333
ARG 114CYS 115 0.4650
CYS 115LYS 116 0.7619
LYS 116GLY 117 0.8529
GLY 117THR 118 0.9542
THR 118ASP 119 1.2309
ASP 119VAL 120 1.1785
VAL 120GLN 121 1.0162
GLN 121ALA 122 1.0244
ALA 122TRP 123 1.2249
TRP 123ILE 124 0.6315
ILE 124ARG 125 1.2348
ARG 125GLY 126 0.9671
GLY 126CYS 127 1.2431
CYS 127ARG 128 1.3402
ARG 128LEU 129 0.7799

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.