This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0988
VAL 2
PHE 3
0.5131
PHE 3
GLY 4
0.5671
GLY 4
ARG 5
0.4520
ARG 5
CYS 6
1.2713
CYS 6
GLU 7
1.0365
GLU 7
LEU 8
0.7178
LEU 8
ALA 9
0.2332
ALA 9
ALA 10
0.7108
ALA 10
ALA 11
0.6165
ALA 11
MET 12
0.1783
MET 12
LYS 13
0.7647
LYS 13
ARG 14
0.8272
ARG 14
HIS 15
0.0722
HIS 15
GLY 16
0.6259
GLY 16
LEU 17
0.4112
LEU 17
ASP 18
0.6010
ASP 18
ASN 19
0.9203
ASN 19
TYR 20
1.0134
TYR 20
ARG 21
0.3477
ARG 21
GLY 22
0.9627
GLY 22
TYR 23
0.2329
TYR 23
SER 24
1.0406
SER 24
LEU 25
0.8835
LEU 25
GLY 26
0.6185
GLY 26
ASN 27
0.3041
ASN 27
TRP 28
0.6325
TRP 28
VAL 29
0.5429
VAL 29
CYS 30
0.5633
CYS 30
ALA 31
0.7754
ALA 31
ALA 32
0.3887
ALA 32
LYS 33
0.3380
LYS 33
PHE 34
1.0262
PHE 34
GLU 35
0.5207
GLU 35
SER 36
0.9365
SER 36
ASN 37
0.0307
ASN 37
PHE 38
0.6819
PHE 38
ASN 39
-0.4523
ASN 39
THR 40
-0.0834
THR 40
GLN 41
0.1556
GLN 41
ALA 42
0.2304
ALA 42
THR 43
-0.7626
THR 43
ASN 44
-0.2274
ASN 44
ARG 45
0.6135
ARG 45
ASN 46
0.2815
ASN 46
THR 47
1.0240
THR 47
ASP 48
0.9369
ASP 48
GLY 49
0.3526
GLY 49
SER 50
0.4902
SER 50
THR 51
-0.1979
THR 51
ASP 52
0.0502
ASP 52
TYR 53
0.1131
TYR 53
GLY 54
-0.3888
GLY 54
ILE 55
-0.4476
ILE 55
LEU 56
0.5349
LEU 56
GLN 57
-0.0100
GLN 57
ILE 58
-0.2556
ILE 58
ASN 59
0.1718
ASN 59
SER 60
0.0301
SER 60
ARG 61
-0.2733
ARG 61
TRP 62
0.3377
TRP 62
TRP 63
0.1578
TRP 63
CYS 64
0.3624
CYS 64
ASN 65
-0.0110
ASN 65
ASP 66
-0.1105
ASP 66
GLY 67
0.0645
GLY 67
ARG 68
-0.0419
ARG 68
THR 69
0.2384
THR 69
PRO 70
-0.1702
PRO 70
GLY 71
0.4459
GLY 71
SER 72
0.0208
SER 72
ARG 73
-0.0093
ARG 73
ASN 74
0.3133
ASN 74
LEU 75
0.0929
LEU 75
CYS 76
0.1893
CYS 76
ASN 77
0.2061
ASN 77
ILE 78
0.0075
ILE 78
PRO 79
-0.0395
PRO 79
CYS 80
0.0085
CYS 80
SER 81
0.2629
SER 81
ALA 82
-0.1101
ALA 82
LEU 83
0.1220
LEU 83
LEU 84
0.3151
LEU 84
SER 85
-0.0800
SER 85
SER 86
-0.2743
SER 86
ASP 87
0.2778
ASP 87
ILE 88
0.3307
ILE 88
THR 89
0.0738
THR 89
ALA 90
-0.2200
ALA 90
SER 91
0.2166
SER 91
VAL 92
0.1167
VAL 92
ASN 93
0.1446
ASN 93
CYS 94
0.1134
CYS 94
ALA 95
0.2362
ALA 95
LYS 96
0.3239
LYS 96
LYS 97
0.2053
LYS 97
ILE 98
0.3149
ILE 98
VAL 99
0.5626
VAL 99
SER 100
0.8731
SER 100
ASP 101
0.4387
ASP 101
GLY 102
1.2274
GLY 102
ASN 103
0.9879
ASN 103
GLY 104
1.2931
GLY 104
MET 105
0.9552
MET 105
ASN 106
0.9524
ASN 106
ALA 107
0.3548
ALA 107
TRP 108
1.0644
TRP 108
VAL 109
1.0128
VAL 109
ALA 110
1.1091
ALA 110
TRP 111
0.9511
TRP 111
ARG 112
0.6896
ARG 112
ASN 113
1.1592
ASN 113
ARG 114
1.0967
ARG 114
CYS 115
1.1574
CYS 115
LYS 116
0.9488
LYS 116
GLY 117
1.4781
GLY 117
THR 118
1.0440
THR 118
ASP 119
1.4934
ASP 119
VAL 120
1.6287
VAL 120
GLN 121
0.5495
GLN 121
ALA 122
1.3041
ALA 122
TRP 123
1.2856
TRP 123
ILE 124
1.1094
ILE 124
ARG 125
0.9447
ARG 125
GLY 126
1.7054
GLY 126
CYS 127
1.3272
CYS 127
ARG 128
1.7439
ARG 128
LEU 129
1.7247
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.