CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.8841
VAL 2PHE 3 0.4286
PHE 3GLY 4 0.3266
GLY 4ARG 5 0.7945
ARG 5CYS 6 1.0087
CYS 6GLU 7 0.7881
GLU 7LEU 8 0.3856
LEU 8ALA 9 0.4943
ALA 9ALA 10 0.4322
ALA 10ALA 11 -0.2664
ALA 11MET 12 0.6900
MET 12LYS 13 0.3986
LYS 13ARG 14 0.6343
ARG 14HIS 15 1.0407
HIS 15GLY 16 0.3008
GLY 16LEU 17 0.3599
LEU 17ASP 18 -0.2796
ASP 18ASN 19 0.5902
ASN 19TYR 20 0.3618
TYR 20ARG 21 0.4830
ARG 21GLY 22 0.4316
GLY 22TYR 23 0.0768
TYR 23SER 24 0.8735
SER 24LEU 25 0.6126
LEU 25GLY 26 0.2023
GLY 26ASN 27 0.6609
ASN 27TRP 28 0.4508
TRP 28VAL 29 0.3887
VAL 29CYS 30 0.7768
CYS 30ALA 31 0.3764
ALA 31ALA 32 0.5232
ALA 32LYS 33 0.3499
LYS 33PHE 34 0.8172
PHE 34GLU 35 0.8663
GLU 35SER 36 0.8272
SER 36ASN 37 0.8312
ASN 37PHE 38 0.6336
PHE 38ASN 39 0.6852
ASN 39THR 40 1.0772
THR 40GLN 41 0.8705
GLN 41ALA 42 0.0805
ALA 42THR 43 1.1708
THR 43ASN 44 1.1898
ASN 44ARG 45 1.0354
ARG 45ASN 46 1.3237
ASN 46THR 47 1.7324
THR 47ASP 48 1.5801
ASP 48GLY 49 1.4001
GLY 49SER 50 1.4426
SER 50THR 51 1.0905
THR 51ASP 52 -0.6041
ASP 52TYR 53 0.3814
TYR 53GLY 54 0.7537
GLY 54ILE 55 1.2439
ILE 55LEU 56 0.4501
LEU 56GLN 57 0.8790
GLN 57ILE 58 0.7604
ILE 58ASN 59 0.8005
ASN 59SER 60 0.1520
SER 60ARG 61 0.7155
ARG 61TRP 62 0.7454
TRP 62TRP 63 0.1423
TRP 63CYS 64 0.4550
CYS 64ASN 65 -0.3319
ASN 65ASP 66 0.1771
ASP 66GLY 67 0.8677
GLY 67ARG 68 1.0876
ARG 68THR 69 0.4079
THR 69PRO 70 1.3917
PRO 70GLY 71 1.2296
GLY 71SER 72 1.2276
SER 72ARG 73 0.6236
ARG 73ASN 74 0.9296
ASN 74LEU 75 0.3556
LEU 75CYS 76 0.5399
CYS 76ASN 77 0.8392
ASN 77ILE 78 0.5393
ILE 78PRO 79 0.5828
PRO 79CYS 80 0.7306
CYS 80SER 81 0.5296
SER 81ALA 82 0.6386
ALA 82LEU 83 0.9496
LEU 83LEU 84 0.5243
LEU 84SER 85 0.7617
SER 85SER 86 1.1300
SER 86ASP 87 0.7107
ASP 87ILE 88 0.9857
ILE 88THR 89 0.9183
THR 89ALA 90 0.7771
ALA 90SER 91 0.8539
SER 91VAL 92 0.2454
VAL 92ASN 93 0.8691
ASN 93CYS 94 -0.1982
CYS 94ALA 95 0.9471
ALA 95LYS 96 0.2280
LYS 96LYS 97 0.0766
LYS 97ILE 98 0.5979
ILE 98VAL 99 0.5205
VAL 99SER 100 0.4811
SER 100ASP 101 0.3057
ASP 101GLY 102 0.9808
GLY 102ASN 103 0.0576
ASN 103GLY 104 0.9177
GLY 104MET 105 0.3814
MET 105ASN 106 0.4214
ASN 106ALA 107 0.8316
ALA 107TRP 108 0.1385
TRP 108VAL 109 1.0953
VAL 109ALA 110 -0.0008
ALA 110TRP 111 0.3909
TRP 111ARG 112 0.7086
ARG 112ASN 113 0.8600
ASN 113ARG 114 0.3842
ARG 114CYS 115 0.7663
CYS 115LYS 116 0.5726
LYS 116GLY 117 1.5280
GLY 117THR 118 1.0120
THR 118ASP 119 1.0634
ASP 119VAL 120 1.4644
VAL 120GLN 121 1.0917
GLN 121ALA 122 0.7772
ALA 122TRP 123 1.2721
TRP 123ILE 124 1.0342
ILE 124ARG 125 0.9732
ARG 125GLY 126 0.6529
GLY 126CYS 127 0.3394
CYS 127ARG 128 1.4682
ARG 128LEU 129 1.3035

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.