CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.1965
VAL 2PHE 3 0.7085
PHE 3GLY 4 0.4710
GLY 4ARG 5 0.9483
ARG 5CYS 6 0.2592
CYS 6GLU 7 1.2040
GLU 7LEU 8 0.8431
LEU 8ALA 9 0.4660
ALA 9ALA 10 0.8165
ALA 10ALA 11 0.0976
ALA 11MET 12 0.7304
MET 12LYS 13 0.8700
LYS 13ARG 14 1.0056
ARG 14HIS 15 0.9605
HIS 15GLY 16 0.5932
GLY 16LEU 17 0.6510
LEU 17ASP 18 0.7484
ASP 18ASN 19 0.7483
ASN 19TYR 20 0.7174
TYR 20ARG 21 0.5809
ARG 21GLY 22 0.7747
GLY 22TYR 23 0.7664
TYR 23SER 24 1.1494
SER 24LEU 25 -0.0633
LEU 25GLY 26 0.7073
GLY 26ASN 27 0.6849
ASN 27TRP 28 0.6043
TRP 28VAL 29 0.2275
VAL 29CYS 30 0.2500
CYS 30ALA 31 0.2945
ALA 31ALA 32 0.4178
ALA 32LYS 33 -0.2276
LYS 33PHE 34 0.9138
PHE 34GLU 35 0.7980
GLU 35SER 36 0.9211
SER 36ASN 37 0.2360
ASN 37PHE 38 0.6333
PHE 38ASN 39 0.4986
ASN 39THR 40 0.1514
THR 40GLN 41 0.8406
GLN 41ALA 42 0.6088
ALA 42THR 43 1.0824
THR 43ASN 44 0.9710
ASN 44ARG 45 1.1825
ARG 45ASN 46 1.2295
ASN 46THR 47 0.8057
THR 47ASP 48 1.6511
ASP 48GLY 49 1.4091
GLY 49SER 50 1.2838
SER 50THR 51 1.1863
THR 51ASP 52 0.9023
ASP 52TYR 53 -0.1525
TYR 53GLY 54 1.0283
GLY 54ILE 55 0.8616
ILE 55LEU 56 0.4557
LEU 56GLN 57 0.8685
GLN 57ILE 58 0.7199
ILE 58ASN 59 -0.1054
ASN 59SER 60 0.5575
SER 60ARG 61 1.1342
ARG 61TRP 62 1.0149
TRP 62TRP 63 0.8642
TRP 63CYS 64 0.4040
CYS 64ASN 65 0.3727
ASN 65ASP 66 1.0383
ASP 66GLY 67 1.5241
GLY 67ARG 68 1.3239
ARG 68THR 69 1.4395
THR 69PRO 70 1.5180
PRO 70GLY 71 1.2971
GLY 71SER 72 1.4823
SER 72ARG 73 0.9549
ARG 73ASN 74 1.2085
ASN 74LEU 75 0.6837
LEU 75CYS 76 0.4770
CYS 76ASN 77 1.1429
ASN 77ILE 78 1.0221
ILE 78PRO 79 0.8108
PRO 79CYS 80 0.5269
CYS 80SER 81 0.6722
SER 81ALA 82 0.7259
ALA 82LEU 83 0.6522
LEU 83LEU 84 -0.5924
LEU 84SER 85 1.0097
SER 85SER 86 0.8116
SER 86ASP 87 0.3201
ASP 87ILE 88 0.4338
ILE 88THR 89 -0.7525
THR 89ALA 90 1.1042
ALA 90SER 91 0.3570
SER 91VAL 92 0.8782
VAL 92ASN 93 0.5490
ASN 93CYS 94 0.7420
CYS 94ALA 95 0.8610
ALA 95LYS 96 0.6187
LYS 96LYS 97 1.0857
LYS 97ILE 98 0.8024
ILE 98VAL 99 0.8427
VAL 99SER 100 0.7879
SER 100ASP 101 0.6869
ASP 101GLY 102 1.1901
GLY 102ASN 103 1.2314
ASN 103GLY 104 0.9428
GLY 104MET 105 1.0273
MET 105ASN 106 0.6051
ASN 106ALA 107 1.1294
ALA 107TRP 108 0.7038
TRP 108VAL 109 1.0913
VAL 109ALA 110 0.2295
ALA 110TRP 111 0.4832
TRP 111ARG 112 1.0211
ARG 112ASN 113 0.8943
ASN 113ARG 114 0.7441
ARG 114CYS 115 0.5768
CYS 115LYS 116 1.0615
LYS 116GLY 117 1.5342
GLY 117THR 118 1.6087
THR 118ASP 119 1.6835
ASP 119VAL 120 1.4292
VAL 120GLN 121 1.3612
GLN 121ALA 122 1.3180
ALA 122TRP 123 1.4528
TRP 123ILE 124 0.2391
ILE 124ARG 125 1.5496
ARG 125GLY 126 1.3423
GLY 126CYS 127 1.5345
CYS 127ARG 128 0.8215
ARG 128LEU 129 1.5735

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.