This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1965
VAL 2
PHE 3
0.7085
PHE 3
GLY 4
0.4710
GLY 4
ARG 5
0.9483
ARG 5
CYS 6
0.2592
CYS 6
GLU 7
1.2040
GLU 7
LEU 8
0.8431
LEU 8
ALA 9
0.4660
ALA 9
ALA 10
0.8165
ALA 10
ALA 11
0.0976
ALA 11
MET 12
0.7304
MET 12
LYS 13
0.8700
LYS 13
ARG 14
1.0056
ARG 14
HIS 15
0.9605
HIS 15
GLY 16
0.5932
GLY 16
LEU 17
0.6510
LEU 17
ASP 18
0.7484
ASP 18
ASN 19
0.7483
ASN 19
TYR 20
0.7174
TYR 20
ARG 21
0.5809
ARG 21
GLY 22
0.7747
GLY 22
TYR 23
0.7664
TYR 23
SER 24
1.1494
SER 24
LEU 25
-0.0633
LEU 25
GLY 26
0.7073
GLY 26
ASN 27
0.6849
ASN 27
TRP 28
0.6043
TRP 28
VAL 29
0.2275
VAL 29
CYS 30
0.2500
CYS 30
ALA 31
0.2945
ALA 31
ALA 32
0.4178
ALA 32
LYS 33
-0.2276
LYS 33
PHE 34
0.9138
PHE 34
GLU 35
0.7980
GLU 35
SER 36
0.9211
SER 36
ASN 37
0.2360
ASN 37
PHE 38
0.6333
PHE 38
ASN 39
0.4986
ASN 39
THR 40
0.1514
THR 40
GLN 41
0.8406
GLN 41
ALA 42
0.6088
ALA 42
THR 43
1.0824
THR 43
ASN 44
0.9710
ASN 44
ARG 45
1.1825
ARG 45
ASN 46
1.2295
ASN 46
THR 47
0.8057
THR 47
ASP 48
1.6511
ASP 48
GLY 49
1.4091
GLY 49
SER 50
1.2838
SER 50
THR 51
1.1863
THR 51
ASP 52
0.9023
ASP 52
TYR 53
-0.1525
TYR 53
GLY 54
1.0283
GLY 54
ILE 55
0.8616
ILE 55
LEU 56
0.4557
LEU 56
GLN 57
0.8685
GLN 57
ILE 58
0.7199
ILE 58
ASN 59
-0.1054
ASN 59
SER 60
0.5575
SER 60
ARG 61
1.1342
ARG 61
TRP 62
1.0149
TRP 62
TRP 63
0.8642
TRP 63
CYS 64
0.4040
CYS 64
ASN 65
0.3727
ASN 65
ASP 66
1.0383
ASP 66
GLY 67
1.5241
GLY 67
ARG 68
1.3239
ARG 68
THR 69
1.4395
THR 69
PRO 70
1.5180
PRO 70
GLY 71
1.2971
GLY 71
SER 72
1.4823
SER 72
ARG 73
0.9549
ARG 73
ASN 74
1.2085
ASN 74
LEU 75
0.6837
LEU 75
CYS 76
0.4770
CYS 76
ASN 77
1.1429
ASN 77
ILE 78
1.0221
ILE 78
PRO 79
0.8108
PRO 79
CYS 80
0.5269
CYS 80
SER 81
0.6722
SER 81
ALA 82
0.7259
ALA 82
LEU 83
0.6522
LEU 83
LEU 84
-0.5924
LEU 84
SER 85
1.0097
SER 85
SER 86
0.8116
SER 86
ASP 87
0.3201
ASP 87
ILE 88
0.4338
ILE 88
THR 89
-0.7525
THR 89
ALA 90
1.1042
ALA 90
SER 91
0.3570
SER 91
VAL 92
0.8782
VAL 92
ASN 93
0.5490
ASN 93
CYS 94
0.7420
CYS 94
ALA 95
0.8610
ALA 95
LYS 96
0.6187
LYS 96
LYS 97
1.0857
LYS 97
ILE 98
0.8024
ILE 98
VAL 99
0.8427
VAL 99
SER 100
0.7879
SER 100
ASP 101
0.6869
ASP 101
GLY 102
1.1901
GLY 102
ASN 103
1.2314
ASN 103
GLY 104
0.9428
GLY 104
MET 105
1.0273
MET 105
ASN 106
0.6051
ASN 106
ALA 107
1.1294
ALA 107
TRP 108
0.7038
TRP 108
VAL 109
1.0913
VAL 109
ALA 110
0.2295
ALA 110
TRP 111
0.4832
TRP 111
ARG 112
1.0211
ARG 112
ASN 113
0.8943
ASN 113
ARG 114
0.7441
ARG 114
CYS 115
0.5768
CYS 115
LYS 116
1.0615
LYS 116
GLY 117
1.5342
GLY 117
THR 118
1.6087
THR 118
ASP 119
1.6835
ASP 119
VAL 120
1.4292
VAL 120
GLN 121
1.3612
GLN 121
ALA 122
1.3180
ALA 122
TRP 123
1.4528
TRP 123
ILE 124
0.2391
ILE 124
ARG 125
1.5496
ARG 125
GLY 126
1.3423
GLY 126
CYS 127
1.5345
CYS 127
ARG 128
0.8215
ARG 128
LEU 129
1.5735
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.