CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.5470
VAL 2PHE 3 0.3874
PHE 3GLY 4 0.3807
GLY 4ARG 5 -0.0419
ARG 5CYS 6 -0.4653
CYS 6GLU 7 0.2005
GLU 7LEU 8 0.3495
LEU 8ALA 9 0.1959
ALA 9ALA 10 0.3965
ALA 10ALA 11 -0.0078
ALA 11MET 12 0.0762
MET 12LYS 13 0.4739
LYS 13ARG 14 0.4234
ARG 14HIS 15 0.0575
HIS 15GLY 16 -0.1460
GLY 16LEU 17 0.5615
LEU 17ASP 18 0.4273
ASP 18ASN 19 0.1439
ASN 19TYR 20 0.6305
TYR 20ARG 21 0.5530
ARG 21GLY 22 0.7742
GLY 22TYR 23 0.8300
TYR 23SER 24 0.7965
SER 24LEU 25 -0.0135
LEU 25GLY 26 0.6662
GLY 26ASN 27 0.2848
ASN 27TRP 28 0.4785
TRP 28VAL 29 -0.5486
VAL 29CYS 30 0.5971
CYS 30ALA 31 0.4521
ALA 31ALA 32 0.1896
ALA 32LYS 33 -0.1275
LYS 33PHE 34 1.1073
PHE 34GLU 35 0.7015
GLU 35SER 36 1.1298
SER 36ASN 37 -0.1306
ASN 37PHE 38 0.5971
PHE 38ASN 39 0.5023
ASN 39THR 40 0.2742
THR 40GLN 41 0.5838
GLN 41ALA 42 0.5432
ALA 42THR 43 0.9152
THR 43ASN 44 0.4039
ASN 44ARG 45 0.6137
ARG 45ASN 46 1.2853
ASN 46THR 47 1.5199
THR 47ASP 48 0.6036
ASP 48GLY 49 1.2484
GLY 49SER 50 1.2486
SER 50THR 51 1.0138
THR 51ASP 52 0.3065
ASP 52TYR 53 -0.7453
TYR 53GLY 54 0.7092
GLY 54ILE 55 0.6057
ILE 55LEU 56 0.7687
LEU 56GLN 57 0.8780
GLN 57ILE 58 -0.8309
ILE 58ASN 59 0.2697
ASN 59SER 60 0.2350
SER 60ARG 61 0.5830
ARG 61TRP 62 -0.0435
TRP 62TRP 63 0.4048
TRP 63CYS 64 0.9685
CYS 64ASN 65 0.1961
ASN 65ASP 66 0.7587
ASP 66GLY 67 1.0189
GLY 67ARG 68 1.1276
ARG 68THR 69 1.0354
THR 69PRO 70 1.1579
PRO 70GLY 71 1.1150
GLY 71SER 72 0.9550
SER 72ARG 73 0.5411
ARG 73ASN 74 0.1814
ASN 74LEU 75 0.5053
LEU 75CYS 76 -0.0658
CYS 76ASN 77 1.0202
ASN 77ILE 78 0.5576
ILE 78PRO 79 0.4375
PRO 79CYS 80 -0.2192
CYS 80SER 81 0.4077
SER 81ALA 82 0.3108
ALA 82LEU 83 0.3940
LEU 83LEU 84 0.4104
LEU 84SER 85 0.2940
SER 85SER 86 0.4535
SER 86ASP 87 0.6231
ASP 87ILE 88 0.5715
ILE 88THR 89 0.2094
THR 89ALA 90 0.1039
ALA 90SER 91 0.1167
SER 91VAL 92 0.3923
VAL 92ASN 93 -0.7024
ASN 93CYS 94 0.2066
CYS 94ALA 95 0.3692
ALA 95LYS 96 0.1077
LYS 96LYS 97 0.0478
LYS 97ILE 98 0.6410
ILE 98VAL 99 0.8144
VAL 99SER 100 0.6925
SER 100ASP 101 1.3470
ASP 101GLY 102 1.6245
GLY 102ASN 103 1.6872
ASN 103GLY 104 1.6859
GLY 104MET 105 1.0167
MET 105ASN 106 1.4000
ASN 106ALA 107 1.4325
ALA 107TRP 108 1.3812
TRP 108VAL 109 0.9906
VAL 109ALA 110 1.4241
ALA 110TRP 111 1.3477
TRP 111ARG 112 1.1736
ARG 112ASN 113 1.5226
ASN 113ARG 114 1.3050
ARG 114CYS 115 1.3269
CYS 115LYS 116 1.5191
LYS 116GLY 117 1.8474
GLY 117THR 118 1.7793
THR 118ASP 119 1.7740
ASP 119VAL 120 1.0718
VAL 120GLN 121 1.3862
GLN 121ALA 122 1.1909
ALA 122TRP 123 1.2792
TRP 123ILE 124 0.9462
ILE 124ARG 125 1.1986
ARG 125GLY 126 1.4676
GLY 126CYS 127 1.2213
CYS 127ARG 128 1.3825
ARG 128LEU 129 1.4462

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.