This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.5470
VAL 2
PHE 3
0.3874
PHE 3
GLY 4
0.3807
GLY 4
ARG 5
-0.0419
ARG 5
CYS 6
-0.4653
CYS 6
GLU 7
0.2005
GLU 7
LEU 8
0.3495
LEU 8
ALA 9
0.1959
ALA 9
ALA 10
0.3965
ALA 10
ALA 11
-0.0078
ALA 11
MET 12
0.0762
MET 12
LYS 13
0.4739
LYS 13
ARG 14
0.4234
ARG 14
HIS 15
0.0575
HIS 15
GLY 16
-0.1460
GLY 16
LEU 17
0.5615
LEU 17
ASP 18
0.4273
ASP 18
ASN 19
0.1439
ASN 19
TYR 20
0.6305
TYR 20
ARG 21
0.5530
ARG 21
GLY 22
0.7742
GLY 22
TYR 23
0.8300
TYR 23
SER 24
0.7965
SER 24
LEU 25
-0.0135
LEU 25
GLY 26
0.6662
GLY 26
ASN 27
0.2848
ASN 27
TRP 28
0.4785
TRP 28
VAL 29
-0.5486
VAL 29
CYS 30
0.5971
CYS 30
ALA 31
0.4521
ALA 31
ALA 32
0.1896
ALA 32
LYS 33
-0.1275
LYS 33
PHE 34
1.1073
PHE 34
GLU 35
0.7015
GLU 35
SER 36
1.1298
SER 36
ASN 37
-0.1306
ASN 37
PHE 38
0.5971
PHE 38
ASN 39
0.5023
ASN 39
THR 40
0.2742
THR 40
GLN 41
0.5838
GLN 41
ALA 42
0.5432
ALA 42
THR 43
0.9152
THR 43
ASN 44
0.4039
ASN 44
ARG 45
0.6137
ARG 45
ASN 46
1.2853
ASN 46
THR 47
1.5199
THR 47
ASP 48
0.6036
ASP 48
GLY 49
1.2484
GLY 49
SER 50
1.2486
SER 50
THR 51
1.0138
THR 51
ASP 52
0.3065
ASP 52
TYR 53
-0.7453
TYR 53
GLY 54
0.7092
GLY 54
ILE 55
0.6057
ILE 55
LEU 56
0.7687
LEU 56
GLN 57
0.8780
GLN 57
ILE 58
-0.8309
ILE 58
ASN 59
0.2697
ASN 59
SER 60
0.2350
SER 60
ARG 61
0.5830
ARG 61
TRP 62
-0.0435
TRP 62
TRP 63
0.4048
TRP 63
CYS 64
0.9685
CYS 64
ASN 65
0.1961
ASN 65
ASP 66
0.7587
ASP 66
GLY 67
1.0189
GLY 67
ARG 68
1.1276
ARG 68
THR 69
1.0354
THR 69
PRO 70
1.1579
PRO 70
GLY 71
1.1150
GLY 71
SER 72
0.9550
SER 72
ARG 73
0.5411
ARG 73
ASN 74
0.1814
ASN 74
LEU 75
0.5053
LEU 75
CYS 76
-0.0658
CYS 76
ASN 77
1.0202
ASN 77
ILE 78
0.5576
ILE 78
PRO 79
0.4375
PRO 79
CYS 80
-0.2192
CYS 80
SER 81
0.4077
SER 81
ALA 82
0.3108
ALA 82
LEU 83
0.3940
LEU 83
LEU 84
0.4104
LEU 84
SER 85
0.2940
SER 85
SER 86
0.4535
SER 86
ASP 87
0.6231
ASP 87
ILE 88
0.5715
ILE 88
THR 89
0.2094
THR 89
ALA 90
0.1039
ALA 90
SER 91
0.1167
SER 91
VAL 92
0.3923
VAL 92
ASN 93
-0.7024
ASN 93
CYS 94
0.2066
CYS 94
ALA 95
0.3692
ALA 95
LYS 96
0.1077
LYS 96
LYS 97
0.0478
LYS 97
ILE 98
0.6410
ILE 98
VAL 99
0.8144
VAL 99
SER 100
0.6925
SER 100
ASP 101
1.3470
ASP 101
GLY 102
1.6245
GLY 102
ASN 103
1.6872
ASN 103
GLY 104
1.6859
GLY 104
MET 105
1.0167
MET 105
ASN 106
1.4000
ASN 106
ALA 107
1.4325
ALA 107
TRP 108
1.3812
TRP 108
VAL 109
0.9906
VAL 109
ALA 110
1.4241
ALA 110
TRP 111
1.3477
TRP 111
ARG 112
1.1736
ARG 112
ASN 113
1.5226
ASN 113
ARG 114
1.3050
ARG 114
CYS 115
1.3269
CYS 115
LYS 116
1.5191
LYS 116
GLY 117
1.8474
GLY 117
THR 118
1.7793
THR 118
ASP 119
1.7740
ASP 119
VAL 120
1.0718
VAL 120
GLN 121
1.3862
GLN 121
ALA 122
1.1909
ALA 122
TRP 123
1.2792
TRP 123
ILE 124
0.9462
ILE 124
ARG 125
1.1986
ARG 125
GLY 126
1.4676
GLY 126
CYS 127
1.2213
CYS 127
ARG 128
1.3825
ARG 128
LEU 129
1.4462
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.