CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.1500
VAL 2PHE 3 0.9538
PHE 3GLY 4 0.4906
GLY 4ARG 5 1.0278
ARG 5CYS 6 0.5334
CYS 6GLU 7 0.8411
GLU 7LEU 8 0.4846
LEU 8ALA 9 0.5979
ALA 9ALA 10 0.0694
ALA 10ALA 11 0.4075
ALA 11MET 12 0.6096
MET 12LYS 13 0.0572
LYS 13ARG 14 0.6423
ARG 14HIS 15 0.2188
HIS 15GLY 16 0.6189
GLY 16LEU 17 0.1444
LEU 17ASP 18 0.3763
ASP 18ASN 19 0.7337
ASN 19TYR 20 0.6613
TYR 20ARG 21 0.4914
ARG 21GLY 22 0.6290
GLY 22TYR 23 0.2162
TYR 23SER 24 0.5522
SER 24LEU 25 0.6795
LEU 25GLY 26 0.1454
GLY 26ASN 27 0.5580
ASN 27TRP 28 0.6550
TRP 28VAL 29 0.6887
VAL 29CYS 30 -0.1105
CYS 30ALA 31 0.7038
ALA 31ALA 32 -0.9415
ALA 32LYS 33 0.6845
LYS 33PHE 34 0.5281
PHE 34GLU 35 0.8837
GLU 35SER 36 0.8854
SER 36ASN 37 0.9158
ASN 37PHE 38 -0.2214
PHE 38ASN 39 0.8648
ASN 39THR 40 0.1531
THR 40GLN 41 0.4757
GLN 41ALA 42 0.8407
ALA 42THR 43 0.9721
THR 43ASN 44 0.7549
ASN 44ARG 45 1.4706
ARG 45ASN 46 1.3486
ASN 46THR 47 1.7144
THR 47ASP 48 1.8025
ASP 48GLY 49 1.5175
GLY 49SER 50 1.3784
SER 50THR 51 1.1347
THR 51ASP 52 0.6997
ASP 52TYR 53 0.3977
TYR 53GLY 54 0.6130
GLY 54ILE 55 0.7340
ILE 55LEU 56 0.4869
LEU 56GLN 57 0.7499
GLN 57ILE 58 0.8076
ILE 58ASN 59 0.2468
ASN 59SER 60 0.7909
SER 60ARG 61 0.3616
ARG 61TRP 62 1.4163
TRP 62TRP 63 0.6881
TRP 63CYS 64 0.8576
CYS 64ASN 65 0.8229
ASN 65ASP 66 0.8672
ASP 66GLY 67 1.4321
GLY 67ARG 68 1.0447
ARG 68THR 69 1.3051
THR 69PRO 70 1.5297
PRO 70GLY 71 1.5644
GLY 71SER 72 1.4077
SER 72ARG 73 1.4848
ARG 73ASN 74 0.9684
ASN 74LEU 75 0.8780
LEU 75CYS 76 1.0123
CYS 76ASN 77 1.0528
ASN 77ILE 78 0.9478
ILE 78PRO 79 0.9790
PRO 79CYS 80 0.8959
CYS 80SER 81 0.8775
SER 81ALA 82 0.6696
ALA 82LEU 83 0.7580
LEU 83LEU 84 0.7347
LEU 84SER 85 0.7950
SER 85SER 86 0.7239
SER 86ASP 87 0.7016
ASP 87ILE 88 0.8745
ILE 88THR 89 0.5138
THR 89ALA 90 0.9701
ALA 90SER 91 0.5898
SER 91VAL 92 0.5275
VAL 92ASN 93 0.6754
ASN 93CYS 94 0.8728
CYS 94ALA 95 0.8122
ALA 95LYS 96 0.1260
LYS 96LYS 97 1.1431
LYS 97ILE 98 0.8410
ILE 98VAL 99 0.9837
VAL 99SER 100 0.5421
SER 100ASP 101 1.0913
ASP 101GLY 102 1.4297
GLY 102ASN 103 0.9677
ASN 103GLY 104 1.2068
GLY 104MET 105 0.6305
MET 105ASN 106 0.6889
ASN 106ALA 107 0.9437
ALA 107TRP 108 0.7425
TRP 108VAL 109 0.9061
VAL 109ALA 110 0.2083
ALA 110TRP 111 0.0765
TRP 111ARG 112 0.6407
ARG 112ASN 113 0.7016
ASN 113ARG 114 0.3926
ARG 114CYS 115 0.7894
CYS 115LYS 116 0.5496
LYS 116GLY 117 1.6987
GLY 117THR 118 1.5916
THR 118ASP 119 1.3550
ASP 119VAL 120 1.1805
VAL 120GLN 121 0.9422
GLN 121ALA 122 1.0724
ALA 122TRP 123 0.9759
TRP 123ILE 124 0.5980
ILE 124ARG 125 1.1200
ARG 125GLY 126 0.7587
GLY 126CYS 127 1.1658
CYS 127ARG 128 1.3002
ARG 128LEU 129 1.4937

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.