CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 17  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.1848
VAL 2PHE 3 0.1231
PHE 3GLY 4 0.0843
GLY 4ARG 5 -0.0395
ARG 5CYS 6 0.5992
CYS 6GLU 7 -0.2669
GLU 7LEU 8 -0.1444
LEU 8ALA 9 0.2983
ALA 9ALA 10 0.3258
ALA 10ALA 11 0.5418
ALA 11MET 12 -0.0436
MET 12LYS 13 0.6325
LYS 13ARG 14 0.1537
ARG 14HIS 15 0.4345
HIS 15GLY 16 -0.0729
GLY 16LEU 17 0.1297
LEU 17ASP 18 0.3585
ASP 18ASN 19 -0.2019
ASN 19TYR 20 0.4046
TYR 20ARG 21 0.0191
ARG 21GLY 22 0.3713
GLY 22TYR 23 0.3532
TYR 23SER 24 -0.2566
SER 24LEU 25 0.0159
LEU 25GLY 26 -0.0593
GLY 26ASN 27 0.1291
ASN 27TRP 28 0.0568
TRP 28VAL 29 0.0149
VAL 29CYS 30 -0.0505
CYS 30ALA 31 0.4179
ALA 31ALA 32 -0.1130
ALA 32LYS 33 0.0517
LYS 33PHE 34 0.3064
PHE 34GLU 35 0.5094
GLU 35SER 36 0.0569
SER 36ASN 37 0.4972
ASN 37PHE 38 0.1086
PHE 38ASN 39 0.4442
ASN 39THR 40 0.2824
THR 40GLN 41 0.1764
GLN 41ALA 42 0.3571
ALA 42THR 43 0.8843
THR 43ASN 44 0.4217
ASN 44ARG 45 1.1140
ARG 45ASN 46 1.1686
ASN 46THR 47 1.6432
THR 47ASP 48 1.7454
ASP 48GLY 49 0.6876
GLY 49SER 50 0.7475
SER 50THR 51 0.4495
THR 51ASP 52 0.4872
ASP 52TYR 53 0.1046
TYR 53GLY 54 0.5352
GLY 54ILE 55 0.5480
ILE 55LEU 56 -0.0931
LEU 56GLN 57 0.6022
GLN 57ILE 58 -0.1512
ILE 58ASN 59 0.4974
ASN 59SER 60 0.1292
SER 60ARG 61 0.3128
ARG 61TRP 62 1.0391
TRP 62TRP 63 0.5535
TRP 63CYS 64 0.5918
CYS 64ASN 65 0.3156
ASN 65ASP 66 0.8690
ASP 66GLY 67 0.4543
GLY 67ARG 68 0.7102
ARG 68THR 69 0.7712
THR 69PRO 70 0.7341
PRO 70GLY 71 1.1644
GLY 71SER 72 0.8217
SER 72ARG 73 1.2450
ARG 73ASN 74 0.6152
ASN 74LEU 75 0.5453
LEU 75CYS 76 0.8103
CYS 76ASN 77 1.0989
ASN 77ILE 78 1.1962
ILE 78PRO 79 0.5426
PRO 79CYS 80 0.8124
CYS 80SER 81 0.5463
SER 81ALA 82 0.0584
ALA 82LEU 83 0.6108
LEU 83LEU 84 0.2356
LEU 84SER 85 0.3183
SER 85SER 86 0.6842
SER 86ASP 87 -0.2029
ASP 87ILE 88 0.0537
ILE 88THR 89 -0.0272
THR 89ALA 90 0.5028
ALA 90SER 91 0.0633
SER 91VAL 92 0.0642
VAL 92ASN 93 0.2938
ASN 93CYS 94 0.2617
CYS 94ALA 95 0.0012
ALA 95LYS 96 0.0900
LYS 96LYS 97 0.4856
LYS 97ILE 98 -0.8973
ILE 98VAL 99 0.3973
VAL 99SER 100 0.2975
SER 100ASP 101 0.3164
ASP 101GLY 102 1.0946
GLY 102ASN 103 0.4933
ASN 103GLY 104 0.6957
GLY 104MET 105 0.3058
MET 105ASN 106 0.2492
ASN 106ALA 107 -1.0766
ALA 107TRP 108 0.5315
TRP 108VAL 109 0.3556
VAL 109ALA 110 0.4376
ALA 110TRP 111 0.2910
TRP 111ARG 112 0.4260
ARG 112ASN 113 0.0577
ASN 113ARG 114 0.5929
ARG 114CYS 115 0.4920
CYS 115LYS 116 -0.0789
LYS 116GLY 117 0.1989
GLY 117THR 118 0.6014
THR 118ASP 119 1.0053
ASP 119VAL 120 0.3976
VAL 120GLN 121 0.6887
GLN 121ALA 122 0.4644
ALA 122TRP 123 0.8928
TRP 123ILE 124 0.5682
ILE 124ARG 125 1.0006
ARG 125GLY 126 1.2887
GLY 126CYS 127 1.2997
CYS 127ARG 128 1.6449
ARG 128LEU 129 1.8292

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.