This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1848
VAL 2
PHE 3
0.1231
PHE 3
GLY 4
0.0843
GLY 4
ARG 5
-0.0395
ARG 5
CYS 6
0.5992
CYS 6
GLU 7
-0.2669
GLU 7
LEU 8
-0.1444
LEU 8
ALA 9
0.2983
ALA 9
ALA 10
0.3258
ALA 10
ALA 11
0.5418
ALA 11
MET 12
-0.0436
MET 12
LYS 13
0.6325
LYS 13
ARG 14
0.1537
ARG 14
HIS 15
0.4345
HIS 15
GLY 16
-0.0729
GLY 16
LEU 17
0.1297
LEU 17
ASP 18
0.3585
ASP 18
ASN 19
-0.2019
ASN 19
TYR 20
0.4046
TYR 20
ARG 21
0.0191
ARG 21
GLY 22
0.3713
GLY 22
TYR 23
0.3532
TYR 23
SER 24
-0.2566
SER 24
LEU 25
0.0159
LEU 25
GLY 26
-0.0593
GLY 26
ASN 27
0.1291
ASN 27
TRP 28
0.0568
TRP 28
VAL 29
0.0149
VAL 29
CYS 30
-0.0505
CYS 30
ALA 31
0.4179
ALA 31
ALA 32
-0.1130
ALA 32
LYS 33
0.0517
LYS 33
PHE 34
0.3064
PHE 34
GLU 35
0.5094
GLU 35
SER 36
0.0569
SER 36
ASN 37
0.4972
ASN 37
PHE 38
0.1086
PHE 38
ASN 39
0.4442
ASN 39
THR 40
0.2824
THR 40
GLN 41
0.1764
GLN 41
ALA 42
0.3571
ALA 42
THR 43
0.8843
THR 43
ASN 44
0.4217
ASN 44
ARG 45
1.1140
ARG 45
ASN 46
1.1686
ASN 46
THR 47
1.6432
THR 47
ASP 48
1.7454
ASP 48
GLY 49
0.6876
GLY 49
SER 50
0.7475
SER 50
THR 51
0.4495
THR 51
ASP 52
0.4872
ASP 52
TYR 53
0.1046
TYR 53
GLY 54
0.5352
GLY 54
ILE 55
0.5480
ILE 55
LEU 56
-0.0931
LEU 56
GLN 57
0.6022
GLN 57
ILE 58
-0.1512
ILE 58
ASN 59
0.4974
ASN 59
SER 60
0.1292
SER 60
ARG 61
0.3128
ARG 61
TRP 62
1.0391
TRP 62
TRP 63
0.5535
TRP 63
CYS 64
0.5918
CYS 64
ASN 65
0.3156
ASN 65
ASP 66
0.8690
ASP 66
GLY 67
0.4543
GLY 67
ARG 68
0.7102
ARG 68
THR 69
0.7712
THR 69
PRO 70
0.7341
PRO 70
GLY 71
1.1644
GLY 71
SER 72
0.8217
SER 72
ARG 73
1.2450
ARG 73
ASN 74
0.6152
ASN 74
LEU 75
0.5453
LEU 75
CYS 76
0.8103
CYS 76
ASN 77
1.0989
ASN 77
ILE 78
1.1962
ILE 78
PRO 79
0.5426
PRO 79
CYS 80
0.8124
CYS 80
SER 81
0.5463
SER 81
ALA 82
0.0584
ALA 82
LEU 83
0.6108
LEU 83
LEU 84
0.2356
LEU 84
SER 85
0.3183
SER 85
SER 86
0.6842
SER 86
ASP 87
-0.2029
ASP 87
ILE 88
0.0537
ILE 88
THR 89
-0.0272
THR 89
ALA 90
0.5028
ALA 90
SER 91
0.0633
SER 91
VAL 92
0.0642
VAL 92
ASN 93
0.2938
ASN 93
CYS 94
0.2617
CYS 94
ALA 95
0.0012
ALA 95
LYS 96
0.0900
LYS 96
LYS 97
0.4856
LYS 97
ILE 98
-0.8973
ILE 98
VAL 99
0.3973
VAL 99
SER 100
0.2975
SER 100
ASP 101
0.3164
ASP 101
GLY 102
1.0946
GLY 102
ASN 103
0.4933
ASN 103
GLY 104
0.6957
GLY 104
MET 105
0.3058
MET 105
ASN 106
0.2492
ASN 106
ALA 107
-1.0766
ALA 107
TRP 108
0.5315
TRP 108
VAL 109
0.3556
VAL 109
ALA 110
0.4376
ALA 110
TRP 111
0.2910
TRP 111
ARG 112
0.4260
ARG 112
ASN 113
0.0577
ASN 113
ARG 114
0.5929
ARG 114
CYS 115
0.4920
CYS 115
LYS 116
-0.0789
LYS 116
GLY 117
0.1989
GLY 117
THR 118
0.6014
THR 118
ASP 119
1.0053
ASP 119
VAL 120
0.3976
VAL 120
GLN 121
0.6887
GLN 121
ALA 122
0.4644
ALA 122
TRP 123
0.8928
TRP 123
ILE 124
0.5682
ILE 124
ARG 125
1.0006
ARG 125
GLY 126
1.2887
GLY 126
CYS 127
1.2997
CYS 127
ARG 128
1.6449
ARG 128
LEU 129
1.8292
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.