This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.7172
VAL 2
PHE 3
0.9943
PHE 3
GLY 4
0.6335
GLY 4
ARG 5
0.8121
ARG 5
CYS 6
0.4569
CYS 6
GLU 7
0.6033
GLU 7
LEU 8
0.1251
LEU 8
ALA 9
0.7154
ALA 9
ALA 10
-0.1640
ALA 10
ALA 11
0.9957
ALA 11
MET 12
0.5657
MET 12
LYS 13
0.2223
LYS 13
ARG 14
0.9070
ARG 14
HIS 15
0.8137
HIS 15
GLY 16
0.8288
GLY 16
LEU 17
0.7102
LEU 17
ASP 18
0.5634
ASP 18
ASN 19
1.2895
ASN 19
TYR 20
0.6233
TYR 20
ARG 21
0.8219
ARG 21
GLY 22
0.8788
GLY 22
TYR 23
1.3886
TYR 23
SER 24
1.0742
SER 24
LEU 25
0.2118
LEU 25
GLY 26
0.8362
GLY 26
ASN 27
0.0763
ASN 27
TRP 28
0.7299
TRP 28
VAL 29
0.1354
VAL 29
CYS 30
0.1084
CYS 30
ALA 31
-0.7201
ALA 31
ALA 32
-0.3001
ALA 32
LYS 33
0.4254
LYS 33
PHE 34
-0.0628
PHE 34
GLU 35
0.2563
GLU 35
SER 36
-0.3909
SER 36
ASN 37
0.4670
ASN 37
PHE 38
0.3446
PHE 38
ASN 39
0.7171
ASN 39
THR 40
0.5262
THR 40
GLN 41
0.7453
GLN 41
ALA 42
0.8641
ALA 42
THR 43
0.7854
THR 43
ASN 44
1.0810
ASN 44
ARG 45
0.4739
ARG 45
ASN 46
1.0628
ASN 46
THR 47
0.7961
THR 47
ASP 48
1.5902
ASP 48
GLY 49
1.1185
GLY 49
SER 50
1.0687
SER 50
THR 51
0.9360
THR 51
ASP 52
0.0137
ASP 52
TYR 53
0.7277
TYR 53
GLY 54
0.3741
GLY 54
ILE 55
0.2607
ILE 55
LEU 56
0.0447
LEU 56
GLN 57
0.5685
GLN 57
ILE 58
0.9492
ILE 58
ASN 59
-0.0102
ASN 59
SER 60
0.0643
SER 60
ARG 61
0.7849
ARG 61
TRP 62
0.6753
TRP 62
TRP 63
1.1364
TRP 63
CYS 64
0.3599
CYS 64
ASN 65
0.2929
ASN 65
ASP 66
0.9371
ASP 66
GLY 67
0.4533
GLY 67
ARG 68
1.4546
ARG 68
THR 69
1.2309
THR 69
PRO 70
0.6916
PRO 70
GLY 71
1.5170
GLY 71
SER 72
0.7593
SER 72
ARG 73
1.3282
ARG 73
ASN 74
1.3654
ASN 74
LEU 75
-0.0983
LEU 75
CYS 76
0.9545
CYS 76
ASN 77
1.0946
ASN 77
ILE 78
1.1793
ILE 78
PRO 79
0.0737
PRO 79
CYS 80
0.7430
CYS 80
SER 81
0.5422
SER 81
ALA 82
0.2740
ALA 82
LEU 83
0.3755
LEU 83
LEU 84
0.9595
LEU 84
SER 85
1.0361
SER 85
SER 86
0.8134
SER 86
ASP 87
0.8282
ASP 87
ILE 88
1.0685
ILE 88
THR 89
0.7795
THR 89
ALA 90
0.7767
ALA 90
SER 91
0.6489
SER 91
VAL 92
-0.2024
VAL 92
ASN 93
0.5835
ASN 93
CYS 94
0.7826
CYS 94
ALA 95
0.4466
ALA 95
LYS 96
0.6706
LYS 96
LYS 97
0.6873
LYS 97
ILE 98
0.7533
ILE 98
VAL 99
0.1079
VAL 99
SER 100
1.1588
SER 100
ASP 101
1.2804
ASP 101
GLY 102
1.2817
GLY 102
ASN 103
1.2155
ASN 103
GLY 104
1.4475
GLY 104
MET 105
0.9114
MET 105
ASN 106
1.1816
ASN 106
ALA 107
1.0365
ALA 107
TRP 108
0.9303
TRP 108
VAL 109
1.1764
VAL 109
ALA 110
0.6773
ALA 110
TRP 111
0.6042
TRP 111
ARG 112
0.9741
ARG 112
ASN 113
0.6916
ASN 113
ARG 114
1.0044
ARG 114
CYS 115
0.8592
CYS 115
LYS 116
0.9140
LYS 116
GLY 117
1.7111
GLY 117
THR 118
1.1119
THR 118
ASP 119
1.6149
ASP 119
VAL 120
1.7963
VAL 120
GLN 121
1.3103
GLN 121
ALA 122
1.4086
ALA 122
TRP 123
1.5719
TRP 123
ILE 124
1.0606
ILE 124
ARG 125
1.2247
ARG 125
GLY 126
-0.2850
GLY 126
CYS 127
1.0248
CYS 127
ARG 128
1.1601
ARG 128
LEU 129
1.2891
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.