CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 18  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.7172
VAL 2PHE 3 0.9943
PHE 3GLY 4 0.6335
GLY 4ARG 5 0.8121
ARG 5CYS 6 0.4569
CYS 6GLU 7 0.6033
GLU 7LEU 8 0.1251
LEU 8ALA 9 0.7154
ALA 9ALA 10 -0.1640
ALA 10ALA 11 0.9957
ALA 11MET 12 0.5657
MET 12LYS 13 0.2223
LYS 13ARG 14 0.9070
ARG 14HIS 15 0.8137
HIS 15GLY 16 0.8288
GLY 16LEU 17 0.7102
LEU 17ASP 18 0.5634
ASP 18ASN 19 1.2895
ASN 19TYR 20 0.6233
TYR 20ARG 21 0.8219
ARG 21GLY 22 0.8788
GLY 22TYR 23 1.3886
TYR 23SER 24 1.0742
SER 24LEU 25 0.2118
LEU 25GLY 26 0.8362
GLY 26ASN 27 0.0763
ASN 27TRP 28 0.7299
TRP 28VAL 29 0.1354
VAL 29CYS 30 0.1084
CYS 30ALA 31 -0.7201
ALA 31ALA 32 -0.3001
ALA 32LYS 33 0.4254
LYS 33PHE 34 -0.0628
PHE 34GLU 35 0.2563
GLU 35SER 36 -0.3909
SER 36ASN 37 0.4670
ASN 37PHE 38 0.3446
PHE 38ASN 39 0.7171
ASN 39THR 40 0.5262
THR 40GLN 41 0.7453
GLN 41ALA 42 0.8641
ALA 42THR 43 0.7854
THR 43ASN 44 1.0810
ASN 44ARG 45 0.4739
ARG 45ASN 46 1.0628
ASN 46THR 47 0.7961
THR 47ASP 48 1.5902
ASP 48GLY 49 1.1185
GLY 49SER 50 1.0687
SER 50THR 51 0.9360
THR 51ASP 52 0.0137
ASP 52TYR 53 0.7277
TYR 53GLY 54 0.3741
GLY 54ILE 55 0.2607
ILE 55LEU 56 0.0447
LEU 56GLN 57 0.5685
GLN 57ILE 58 0.9492
ILE 58ASN 59 -0.0102
ASN 59SER 60 0.0643
SER 60ARG 61 0.7849
ARG 61TRP 62 0.6753
TRP 62TRP 63 1.1364
TRP 63CYS 64 0.3599
CYS 64ASN 65 0.2929
ASN 65ASP 66 0.9371
ASP 66GLY 67 0.4533
GLY 67ARG 68 1.4546
ARG 68THR 69 1.2309
THR 69PRO 70 0.6916
PRO 70GLY 71 1.5170
GLY 71SER 72 0.7593
SER 72ARG 73 1.3282
ARG 73ASN 74 1.3654
ASN 74LEU 75 -0.0983
LEU 75CYS 76 0.9545
CYS 76ASN 77 1.0946
ASN 77ILE 78 1.1793
ILE 78PRO 79 0.0737
PRO 79CYS 80 0.7430
CYS 80SER 81 0.5422
SER 81ALA 82 0.2740
ALA 82LEU 83 0.3755
LEU 83LEU 84 0.9595
LEU 84SER 85 1.0361
SER 85SER 86 0.8134
SER 86ASP 87 0.8282
ASP 87ILE 88 1.0685
ILE 88THR 89 0.7795
THR 89ALA 90 0.7767
ALA 90SER 91 0.6489
SER 91VAL 92 -0.2024
VAL 92ASN 93 0.5835
ASN 93CYS 94 0.7826
CYS 94ALA 95 0.4466
ALA 95LYS 96 0.6706
LYS 96LYS 97 0.6873
LYS 97ILE 98 0.7533
ILE 98VAL 99 0.1079
VAL 99SER 100 1.1588
SER 100ASP 101 1.2804
ASP 101GLY 102 1.2817
GLY 102ASN 103 1.2155
ASN 103GLY 104 1.4475
GLY 104MET 105 0.9114
MET 105ASN 106 1.1816
ASN 106ALA 107 1.0365
ALA 107TRP 108 0.9303
TRP 108VAL 109 1.1764
VAL 109ALA 110 0.6773
ALA 110TRP 111 0.6042
TRP 111ARG 112 0.9741
ARG 112ASN 113 0.6916
ASN 113ARG 114 1.0044
ARG 114CYS 115 0.8592
CYS 115LYS 116 0.9140
LYS 116GLY 117 1.7111
GLY 117THR 118 1.1119
THR 118ASP 119 1.6149
ASP 119VAL 120 1.7963
VAL 120GLN 121 1.3103
GLN 121ALA 122 1.4086
ALA 122TRP 123 1.5719
TRP 123ILE 124 1.0606
ILE 124ARG 125 1.2247
ARG 125GLY 126 -0.2850
GLY 126CYS 127 1.0248
CYS 127ARG 128 1.1601
ARG 128LEU 129 1.2891

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.