CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 19  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.9925
VAL 2PHE 3 1.3302
PHE 3GLY 4 1.1231
GLY 4ARG 5 1.0296
ARG 5CYS 6 0.7178
CYS 6GLU 7 0.6224
GLU 7LEU 8 0.7817
LEU 8ALA 9 0.8725
ALA 9ALA 10 0.9315
ALA 10ALA 11 1.0510
ALA 11MET 12 0.7855
MET 12LYS 13 0.7512
LYS 13ARG 14 1.1278
ARG 14HIS 15 0.9240
HIS 15GLY 16 0.9466
GLY 16LEU 17 0.4822
LEU 17ASP 18 0.7473
ASP 18ASN 19 1.0259
ASN 19TYR 20 0.7217
TYR 20ARG 21 0.8699
ARG 21GLY 22 0.6571
GLY 22TYR 23 0.7628
TYR 23SER 24 1.1654
SER 24LEU 25 0.8495
LEU 25GLY 26 0.1219
GLY 26ASN 27 0.9919
ASN 27TRP 28 -0.2310
TRP 28VAL 29 0.3818
VAL 29CYS 30 0.7847
CYS 30ALA 31 0.1740
ALA 31ALA 32 0.1668
ALA 32LYS 33 0.5198
LYS 33PHE 34 0.7231
PHE 34GLU 35 0.8340
GLU 35SER 36 1.0253
SER 36ASN 37 1.0542
ASN 37PHE 38 0.6376
PHE 38ASN 39 1.1083
ASN 39THR 40 0.6261
THR 40GLN 41 0.5529
GLN 41ALA 42 0.9378
ALA 42THR 43 1.5149
THR 43ASN 44 1.2027
ASN 44ARG 45 1.0193
ARG 45ASN 46 1.5838
ASN 46THR 47 1.8090
THR 47ASP 48 1.7631
ASP 48GLY 49 1.3085
GLY 49SER 50 1.3708
SER 50THR 51 0.8506
THR 51ASP 52 0.9126
ASP 52TYR 53 0.5196
TYR 53GLY 54 1.1251
GLY 54ILE 55 0.7446
ILE 55LEU 56 0.7507
LEU 56GLN 57 1.0812
GLN 57ILE 58 0.5253
ILE 58ASN 59 0.8565
ASN 59SER 60 0.2395
SER 60ARG 61 0.3942
ARG 61TRP 62 0.6357
TRP 62TRP 63 0.7517
TRP 63CYS 64 0.6260
CYS 64ASN 65 0.7959
ASN 65ASP 66 0.8130
ASP 66GLY 67 1.1766
GLY 67ARG 68 0.9101
ARG 68THR 69 1.3944
THR 69PRO 70 1.2163
PRO 70GLY 71 0.6699
GLY 71SER 72 0.9487
SER 72ARG 73 0.5291
ARG 73ASN 74 0.8158
ASN 74LEU 75 0.8392
LEU 75CYS 76 0.7254
CYS 76ASN 77 0.3094
ASN 77ILE 78 0.9522
ILE 78PRO 79 0.7403
PRO 79CYS 80 0.8648
CYS 80SER 81 0.6078
SER 81ALA 82 0.5489
ALA 82LEU 83 0.2178
LEU 83LEU 84 0.9521
LEU 84SER 85 0.7172
SER 85SER 86 -0.0065
SER 86ASP 87 1.0206
ASP 87ILE 88 0.8975
ILE 88THR 89 0.3265
THR 89ALA 90 0.0942
ALA 90SER 91 -0.9803
SER 91VAL 92 0.6469
VAL 92ASN 93 -0.0117
ASN 93CYS 94 -0.2293
CYS 94ALA 95 0.2192
ALA 95LYS 96 0.5569
LYS 96LYS 97 0.5505
LYS 97ILE 98 0.5896
ILE 98VAL 99 0.8230
VAL 99SER 100 0.3139
SER 100ASP 101 1.0553
ASP 101GLY 102 0.4407
GLY 102ASN 103 1.1567
ASN 103GLY 104 1.1810
GLY 104MET 105 0.7581
MET 105ASN 106 1.2599
ASN 106ALA 107 0.6572
ALA 107TRP 108 0.1541
TRP 108VAL 109 1.2880
VAL 109ALA 110 1.1200
ALA 110TRP 111 0.4371
TRP 111ARG 112 1.3277
ARG 112ASN 113 -0.4232
ASN 113ARG 114 1.2962
ARG 114CYS 115 0.8159
CYS 115LYS 116 1.0727
LYS 116GLY 117 1.3861
GLY 117THR 118 1.3523
THR 118ASP 119 1.7003
ASP 119VAL 120 1.6370
VAL 120GLN 121 1.0623
GLN 121ALA 122 1.1092
ALA 122TRP 123 1.3284
TRP 123ILE 124 0.9352
ILE 124ARG 125 0.6112
ARG 125GLY 126 0.1726
GLY 126CYS 127 0.8944
CYS 127ARG 128 1.0123
ARG 128LEU 129 1.5103

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.