CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 20  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.5055
VAL 2PHE 3 0.8569
PHE 3GLY 4 0.3529
GLY 4ARG 5 0.9876
ARG 5CYS 6 0.9675
CYS 6GLU 7 0.8019
GLU 7LEU 8 0.6990
LEU 8ALA 9 0.4901
ALA 9ALA 10 -0.0213
ALA 10ALA 11 0.5094
ALA 11MET 12 0.5343
MET 12LYS 13 0.0995
LYS 13ARG 14 0.2274
ARG 14HIS 15 0.4761
HIS 15GLY 16 0.8388
GLY 16LEU 17 0.6510
LEU 17ASP 18 0.7038
ASP 18ASN 19 1.2389
ASN 19TYR 20 1.0715
TYR 20ARG 21 1.0213
ARG 21GLY 22 1.0964
GLY 22TYR 23 1.2557
TYR 23SER 24 0.6861
SER 24LEU 25 0.9149
LEU 25GLY 26 0.2923
GLY 26ASN 27 0.6901
ASN 27TRP 28 0.7051
TRP 28VAL 29 0.2884
VAL 29CYS 30 -0.5330
CYS 30ALA 31 0.8757
ALA 31ALA 32 -0.5891
ALA 32LYS 33 0.2622
LYS 33PHE 34 0.3146
PHE 34GLU 35 0.7361
GLU 35SER 36 -0.0632
SER 36ASN 37 0.7633
ASN 37PHE 38 0.6785
PHE 38ASN 39 0.5225
ASN 39THR 40 0.7719
THR 40GLN 41 0.3878
GLN 41ALA 42 -0.0134
ALA 42THR 43 -0.1585
THR 43ASN 44 0.8662
ASN 44ARG 45 0.8996
ARG 45ASN 46 1.1886
ASN 46THR 47 1.3039
THR 47ASP 48 1.5442
ASP 48GLY 49 1.3438
GLY 49SER 50 0.7792
SER 50THR 51 0.6955
THR 51ASP 52 0.8991
ASP 52TYR 53 0.6304
TYR 53GLY 54 0.6054
GLY 54ILE 55 0.7755
ILE 55LEU 56 -0.0859
LEU 56GLN 57 0.6914
GLN 57ILE 58 0.9859
ILE 58ASN 59 1.0053
ASN 59SER 60 0.5568
SER 60ARG 61 0.9208
ARG 61TRP 62 1.0336
TRP 62TRP 63 1.3786
TRP 63CYS 64 0.8244
CYS 64ASN 65 0.8822
ASN 65ASP 66 0.8415
ASP 66GLY 67 1.0981
GLY 67ARG 68 0.6410
ARG 68THR 69 1.4614
THR 69PRO 70 1.0889
PRO 70GLY 71 1.6215
GLY 71SER 72 0.9523
SER 72ARG 73 1.4396
ARG 73ASN 74 1.5888
ASN 74LEU 75 1.0573
LEU 75CYS 76 0.8775
CYS 76ASN 77 1.3436
ASN 77ILE 78 1.1479
ILE 78PRO 79 0.6064
PRO 79CYS 80 0.5934
CYS 80SER 81 0.6878
SER 81ALA 82 0.6709
ALA 82LEU 83 0.1384
LEU 83LEU 84 0.6555
LEU 84SER 85 0.8422
SER 85SER 86 0.9580
SER 86ASP 87 0.8754
ASP 87ILE 88 0.6616
ILE 88THR 89 0.6945
THR 89ALA 90 1.2113
ALA 90SER 91 0.4454
SER 91VAL 92 0.9525
VAL 92ASN 93 0.6409
ASN 93CYS 94 0.9865
CYS 94ALA 95 0.9591
ALA 95LYS 96 0.6631
LYS 96LYS 97 1.3010
LYS 97ILE 98 0.7980
ILE 98VAL 99 1.0099
VAL 99SER 100 0.1284
SER 100ASP 101 1.2571
ASP 101GLY 102 1.5764
GLY 102ASN 103 0.1452
ASN 103GLY 104 1.4566
GLY 104MET 105 0.9896
MET 105ASN 106 -0.3277
ASN 106ALA 107 1.0563
ALA 107TRP 108 0.8036
TRP 108VAL 109 0.5495
VAL 109ALA 110 0.1544
ALA 110TRP 111 0.6452
TRP 111ARG 112 -0.3897
ARG 112ASN 113 0.4499
ASN 113ARG 114 0.6505
ARG 114CYS 115 1.0088
CYS 115LYS 116 -0.2940
LYS 116GLY 117 1.7031
GLY 117THR 118 1.6080
THR 118ASP 119 1.6579
ASP 119VAL 120 1.3266
VAL 120GLN 121 1.3483
GLN 121ALA 122 0.9376
ALA 122TRP 123 1.5090
TRP 123ILE 124 1.0160
ILE 124ARG 125 1.2740
ARG 125GLY 126 1.3386
GLY 126CYS 127 0.5013
CYS 127ARG 128 1.2175
ARG 128LEU 129 1.3025

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.