This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
1.0975
VAL 2
PHE 3
0.5040
PHE 3
GLY 4
0.8361
GLY 4
ARG 5
1.1117
ARG 5
CYS 6
1.1200
CYS 6
GLU 7
0.7196
GLU 7
LEU 8
1.0839
LEU 8
ALA 9
0.3796
ALA 9
ALA 10
0.5784
ALA 10
ALA 11
-0.0379
ALA 11
MET 12
1.1082
MET 12
LYS 13
-1.0308
LYS 13
ARG 14
0.8728
ARG 14
HIS 15
1.1058
HIS 15
GLY 16
1.2070
GLY 16
LEU 17
0.3710
LEU 17
ASP 18
-0.4881
ASP 18
ASN 19
1.4231
ASN 19
TYR 20
1.1082
TYR 20
ARG 21
0.9087
ARG 21
GLY 22
1.2782
GLY 22
TYR 23
1.0219
TYR 23
SER 24
0.9262
SER 24
LEU 25
0.9925
LEU 25
GLY 26
0.1371
GLY 26
ASN 27
0.6193
ASN 27
TRP 28
-1.0861
TRP 28
VAL 29
0.9073
VAL 29
CYS 30
0.5983
CYS 30
ALA 31
-0.0606
ALA 31
ALA 32
0.5587
ALA 32
LYS 33
0.8314
LYS 33
PHE 34
1.0689
PHE 34
GLU 35
0.2073
GLU 35
SER 36
0.7723
SER 36
ASN 37
0.9514
ASN 37
PHE 38
1.1189
PHE 38
ASN 39
0.3023
ASN 39
THR 40
1.0993
THR 40
GLN 41
0.9305
GLN 41
ALA 42
1.0497
ALA 42
THR 43
0.8032
THR 43
ASN 44
0.9993
ASN 44
ARG 45
1.2668
ARG 45
ASN 46
0.5596
ASN 46
THR 47
1.7228
THR 47
ASP 48
1.7537
ASP 48
GLY 49
1.0058
GLY 49
SER 50
1.1781
SER 50
THR 51
0.9538
THR 51
ASP 52
0.4753
ASP 52
TYR 53
1.0904
TYR 53
GLY 54
0.5336
GLY 54
ILE 55
-0.1997
ILE 55
LEU 56
0.5533
LEU 56
GLN 57
0.7024
GLN 57
ILE 58
0.4879
ILE 58
ASN 59
1.0672
ASN 59
SER 60
-0.1937
SER 60
ARG 61
0.7768
ARG 61
TRP 62
0.6192
TRP 62
TRP 63
0.6715
TRP 63
CYS 64
0.8682
CYS 64
ASN 65
0.5466
ASN 65
ASP 66
-0.2010
ASP 66
GLY 67
-0.7827
GLY 67
ARG 68
1.3779
ARG 68
THR 69
0.8447
THR 69
PRO 70
0.9207
PRO 70
GLY 71
1.1189
GLY 71
SER 72
0.8635
SER 72
ARG 73
0.6433
ARG 73
ASN 74
0.9977
ASN 74
LEU 75
0.9167
LEU 75
CYS 76
0.8831
CYS 76
ASN 77
0.9415
ASN 77
ILE 78
1.4055
ILE 78
PRO 79
0.9670
PRO 79
CYS 80
0.4485
CYS 80
SER 81
1.1856
SER 81
ALA 82
0.0902
ALA 82
LEU 83
0.8450
LEU 83
LEU 84
0.3835
LEU 84
SER 85
1.0299
SER 85
SER 86
1.2084
SER 86
ASP 87
0.4575
ASP 87
ILE 88
1.2324
ILE 88
THR 89
0.5820
THR 89
ALA 90
0.7959
ALA 90
SER 91
0.4849
SER 91
VAL 92
-0.2707
VAL 92
ASN 93
0.7126
ASN 93
CYS 94
0.6023
CYS 94
ALA 95
-0.3887
ALA 95
LYS 96
0.5285
LYS 96
LYS 97
1.2014
LYS 97
ILE 98
0.4611
ILE 98
VAL 99
0.1722
VAL 99
SER 100
1.4626
SER 100
ASP 101
1.2004
ASP 101
GLY 102
1.5504
GLY 102
ASN 103
1.6431
ASN 103
GLY 104
1.5172
GLY 104
MET 105
1.2503
MET 105
ASN 106
0.5701
ASN 106
ALA 107
0.7962
ALA 107
TRP 108
0.7314
TRP 108
VAL 109
0.9147
VAL 109
ALA 110
0.3607
ALA 110
TRP 111
1.0354
TRP 111
ARG 112
0.4795
ARG 112
ASN 113
0.9320
ASN 113
ARG 114
0.6301
ARG 114
CYS 115
1.1256
CYS 115
LYS 116
0.7113
LYS 116
GLY 117
1.4011
GLY 117
THR 118
1.1667
THR 118
ASP 119
1.3649
ASP 119
VAL 120
0.2093
VAL 120
GLN 121
1.0003
GLN 121
ALA 122
0.8631
ALA 122
TRP 123
0.6779
TRP 123
ILE 124
0.8290
ILE 124
ARG 125
1.1972
ARG 125
GLY 126
0.6522
GLY 126
CYS 127
1.2628
CYS 127
ARG 128
1.4086
ARG 128
LEU 129
1.0910
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.