CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 21  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 1.0975
VAL 2PHE 3 0.5040
PHE 3GLY 4 0.8361
GLY 4ARG 5 1.1117
ARG 5CYS 6 1.1200
CYS 6GLU 7 0.7196
GLU 7LEU 8 1.0839
LEU 8ALA 9 0.3796
ALA 9ALA 10 0.5784
ALA 10ALA 11 -0.0379
ALA 11MET 12 1.1082
MET 12LYS 13 -1.0308
LYS 13ARG 14 0.8728
ARG 14HIS 15 1.1058
HIS 15GLY 16 1.2070
GLY 16LEU 17 0.3710
LEU 17ASP 18 -0.4881
ASP 18ASN 19 1.4231
ASN 19TYR 20 1.1082
TYR 20ARG 21 0.9087
ARG 21GLY 22 1.2782
GLY 22TYR 23 1.0219
TYR 23SER 24 0.9262
SER 24LEU 25 0.9925
LEU 25GLY 26 0.1371
GLY 26ASN 27 0.6193
ASN 27TRP 28 -1.0861
TRP 28VAL 29 0.9073
VAL 29CYS 30 0.5983
CYS 30ALA 31 -0.0606
ALA 31ALA 32 0.5587
ALA 32LYS 33 0.8314
LYS 33PHE 34 1.0689
PHE 34GLU 35 0.2073
GLU 35SER 36 0.7723
SER 36ASN 37 0.9514
ASN 37PHE 38 1.1189
PHE 38ASN 39 0.3023
ASN 39THR 40 1.0993
THR 40GLN 41 0.9305
GLN 41ALA 42 1.0497
ALA 42THR 43 0.8032
THR 43ASN 44 0.9993
ASN 44ARG 45 1.2668
ARG 45ASN 46 0.5596
ASN 46THR 47 1.7228
THR 47ASP 48 1.7537
ASP 48GLY 49 1.0058
GLY 49SER 50 1.1781
SER 50THR 51 0.9538
THR 51ASP 52 0.4753
ASP 52TYR 53 1.0904
TYR 53GLY 54 0.5336
GLY 54ILE 55 -0.1997
ILE 55LEU 56 0.5533
LEU 56GLN 57 0.7024
GLN 57ILE 58 0.4879
ILE 58ASN 59 1.0672
ASN 59SER 60 -0.1937
SER 60ARG 61 0.7768
ARG 61TRP 62 0.6192
TRP 62TRP 63 0.6715
TRP 63CYS 64 0.8682
CYS 64ASN 65 0.5466
ASN 65ASP 66 -0.2010
ASP 66GLY 67 -0.7827
GLY 67ARG 68 1.3779
ARG 68THR 69 0.8447
THR 69PRO 70 0.9207
PRO 70GLY 71 1.1189
GLY 71SER 72 0.8635
SER 72ARG 73 0.6433
ARG 73ASN 74 0.9977
ASN 74LEU 75 0.9167
LEU 75CYS 76 0.8831
CYS 76ASN 77 0.9415
ASN 77ILE 78 1.4055
ILE 78PRO 79 0.9670
PRO 79CYS 80 0.4485
CYS 80SER 81 1.1856
SER 81ALA 82 0.0902
ALA 82LEU 83 0.8450
LEU 83LEU 84 0.3835
LEU 84SER 85 1.0299
SER 85SER 86 1.2084
SER 86ASP 87 0.4575
ASP 87ILE 88 1.2324
ILE 88THR 89 0.5820
THR 89ALA 90 0.7959
ALA 90SER 91 0.4849
SER 91VAL 92 -0.2707
VAL 92ASN 93 0.7126
ASN 93CYS 94 0.6023
CYS 94ALA 95 -0.3887
ALA 95LYS 96 0.5285
LYS 96LYS 97 1.2014
LYS 97ILE 98 0.4611
ILE 98VAL 99 0.1722
VAL 99SER 100 1.4626
SER 100ASP 101 1.2004
ASP 101GLY 102 1.5504
GLY 102ASN 103 1.6431
ASN 103GLY 104 1.5172
GLY 104MET 105 1.2503
MET 105ASN 106 0.5701
ASN 106ALA 107 0.7962
ALA 107TRP 108 0.7314
TRP 108VAL 109 0.9147
VAL 109ALA 110 0.3607
ALA 110TRP 111 1.0354
TRP 111ARG 112 0.4795
ARG 112ASN 113 0.9320
ASN 113ARG 114 0.6301
ARG 114CYS 115 1.1256
CYS 115LYS 116 0.7113
LYS 116GLY 117 1.4011
GLY 117THR 118 1.1667
THR 118ASP 119 1.3649
ASP 119VAL 120 0.2093
VAL 120GLN 121 1.0003
GLN 121ALA 122 0.8631
ALA 122TRP 123 0.6779
TRP 123ILE 124 0.8290
ILE 124ARG 125 1.1972
ARG 125GLY 126 0.6522
GLY 126CYS 127 1.2628
CYS 127ARG 128 1.4086
ARG 128LEU 129 1.0910

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.