This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.3336
VAL 2
PHE 3
1.1255
PHE 3
GLY 4
0.4139
GLY 4
ARG 5
1.1911
ARG 5
CYS 6
0.7876
CYS 6
GLU 7
1.0008
GLU 7
LEU 8
1.2155
LEU 8
ALA 9
0.7378
ALA 9
ALA 10
0.8856
ALA 10
ALA 11
0.7026
ALA 11
MET 12
1.2058
MET 12
LYS 13
0.5588
LYS 13
ARG 14
1.1673
ARG 14
HIS 15
1.2123
HIS 15
GLY 16
0.8116
GLY 16
LEU 17
0.9844
LEU 17
ASP 18
0.4116
ASP 18
ASN 19
0.8005
ASN 19
TYR 20
1.2371
TYR 20
ARG 21
1.2049
ARG 21
GLY 22
1.4568
GLY 22
TYR 23
1.2675
TYR 23
SER 24
1.0916
SER 24
LEU 25
1.1040
LEU 25
GLY 26
0.7861
GLY 26
ASN 27
-0.1030
ASN 27
TRP 28
0.5405
TRP 28
VAL 29
0.7813
VAL 29
CYS 30
-0.3649
CYS 30
ALA 31
0.3062
ALA 31
ALA 32
0.6923
ALA 32
LYS 33
0.2333
LYS 33
PHE 34
0.8383
PHE 34
GLU 35
0.9805
GLU 35
SER 36
1.1406
SER 36
ASN 37
0.3416
ASN 37
PHE 38
-0.5305
PHE 38
ASN 39
1.0682
ASN 39
THR 40
0.4273
THR 40
GLN 41
0.7967
GLN 41
ALA 42
0.7437
ALA 42
THR 43
0.8478
THR 43
ASN 44
0.3147
ASN 44
ARG 45
0.9520
ARG 45
ASN 46
0.2897
ASN 46
THR 47
0.9083
THR 47
ASP 48
1.0494
ASP 48
GLY 49
0.6359
GLY 49
SER 50
0.9565
SER 50
THR 51
-0.2421
THR 51
ASP 52
0.8800
ASP 52
TYR 53
0.3250
TYR 53
GLY 54
0.7280
GLY 54
ILE 55
0.7078
ILE 55
LEU 56
0.9287
LEU 56
GLN 57
1.1374
GLN 57
ILE 58
0.6550
ILE 58
ASN 59
1.0603
ASN 59
SER 60
0.4662
SER 60
ARG 61
0.3224
ARG 61
TRP 62
0.6879
TRP 62
TRP 63
0.6838
TRP 63
CYS 64
1.0602
CYS 64
ASN 65
0.6391
ASN 65
ASP 66
1.0636
ASP 66
GLY 67
0.5935
GLY 67
ARG 68
1.3065
ARG 68
THR 69
0.8559
THR 69
PRO 70
1.0694
PRO 70
GLY 71
1.0633
GLY 71
SER 72
0.7668
SER 72
ARG 73
0.6119
ARG 73
ASN 74
-0.1729
ASN 74
LEU 75
0.8076
LEU 75
CYS 76
0.1508
CYS 76
ASN 77
0.8796
ASN 77
ILE 78
0.8938
ILE 78
PRO 79
0.8710
PRO 79
CYS 80
0.0828
CYS 80
SER 81
0.0062
SER 81
ALA 82
0.6720
ALA 82
LEU 83
0.1655
LEU 83
LEU 84
0.9698
LEU 84
SER 85
0.2133
SER 85
SER 86
0.7966
SER 86
ASP 87
1.0754
ASP 87
ILE 88
1.0096
ILE 88
THR 89
0.4059
THR 89
ALA 90
-0.2315
ALA 90
SER 91
0.1166
SER 91
VAL 92
0.8452
VAL 92
ASN 93
-0.3096
ASN 93
CYS 94
0.2821
CYS 94
ALA 95
0.6205
ALA 95
LYS 96
0.7341
LYS 96
LYS 97
0.9765
LYS 97
ILE 98
0.8368
ILE 98
VAL 99
0.9619
VAL 99
SER 100
1.3334
SER 100
ASP 101
1.3917
ASP 101
GLY 102
0.9847
GLY 102
ASN 103
0.9261
ASN 103
GLY 104
1.4425
GLY 104
MET 105
1.1662
MET 105
ASN 106
1.4092
ASN 106
ALA 107
0.9916
ALA 107
TRP 108
0.7682
TRP 108
VAL 109
1.4068
VAL 109
ALA 110
0.7941
ALA 110
TRP 111
0.9389
TRP 111
ARG 112
1.4790
ARG 112
ASN 113
0.9586
ASN 113
ARG 114
1.3713
ARG 114
CYS 115
1.3043
CYS 115
LYS 116
1.3979
LYS 116
GLY 117
1.3334
GLY 117
THR 118
1.5124
THR 118
ASP 119
1.2358
ASP 119
VAL 120
1.4221
VAL 120
GLN 121
1.3586
GLN 121
ALA 122
1.5219
ALA 122
TRP 123
1.5228
TRP 123
ILE 124
1.1627
ILE 124
ARG 125
1.5920
ARG 125
GLY 126
1.4154
GLY 126
CYS 127
1.2504
CYS 127
ARG 128
1.2629
ARG 128
LEU 129
0.7034
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.