This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.3361
VAL 2
PHE 3
0.9652
PHE 3
GLY 4
-0.1195
GLY 4
ARG 5
1.0345
ARG 5
CYS 6
0.5560
CYS 6
GLU 7
0.9077
GLU 7
LEU 8
0.8408
LEU 8
ALA 9
-0.7078
ALA 9
ALA 10
0.7357
ALA 10
ALA 11
0.3947
ALA 11
MET 12
0.3133
MET 12
LYS 13
0.1804
LYS 13
ARG 14
0.9167
ARG 14
HIS 15
0.7308
HIS 15
GLY 16
0.0344
GLY 16
LEU 17
0.2398
LEU 17
ASP 18
0.6214
ASP 18
ASN 19
0.0680
ASN 19
TYR 20
0.7377
TYR 20
ARG 21
0.8587
ARG 21
GLY 22
0.7606
GLY 22
TYR 23
0.8365
TYR 23
SER 24
0.5556
SER 24
LEU 25
-0.3189
LEU 25
GLY 26
0.1305
GLY 26
ASN 27
0.7045
ASN 27
TRP 28
-0.1001
TRP 28
VAL 29
0.6895
VAL 29
CYS 30
0.5598
CYS 30
ALA 31
0.6629
ALA 31
ALA 32
0.5648
ALA 32
LYS 33
0.6053
LYS 33
PHE 34
0.7798
PHE 34
GLU 35
0.6759
GLU 35
SER 36
0.7319
SER 36
ASN 37
0.8032
ASN 37
PHE 38
0.3369
PHE 38
ASN 39
0.1667
ASN 39
THR 40
0.3305
THR 40
GLN 41
0.6236
GLN 41
ALA 42
1.1061
ALA 42
THR 43
0.9862
THR 43
ASN 44
1.2299
ASN 44
ARG 45
0.8923
ARG 45
ASN 46
1.4389
ASN 46
THR 47
1.5405
THR 47
ASP 48
1.4816
ASP 48
GLY 49
0.7901
GLY 49
SER 50
1.2708
SER 50
THR 51
1.0425
THR 51
ASP 52
0.3037
ASP 52
TYR 53
1.0475
TYR 53
GLY 54
0.9594
GLY 54
ILE 55
0.5012
ILE 55
LEU 56
0.8415
LEU 56
GLN 57
0.7810
GLN 57
ILE 58
1.0212
ILE 58
ASN 59
0.7264
ASN 59
SER 60
0.5061
SER 60
ARG 61
0.7325
ARG 61
TRP 62
0.1084
TRP 62
TRP 63
0.4361
TRP 63
CYS 64
0.8879
CYS 64
ASN 65
0.6733
ASN 65
ASP 66
-0.3767
ASP 66
GLY 67
1.3050
GLY 67
ARG 68
1.3013
ARG 68
THR 69
1.1662
THR 69
PRO 70
0.3406
PRO 70
GLY 71
1.2389
GLY 71
SER 72
0.5423
SER 72
ARG 73
0.5117
ARG 73
ASN 74
1.3353
ASN 74
LEU 75
0.7446
LEU 75
CYS 76
0.8577
CYS 76
ASN 77
1.0414
ASN 77
ILE 78
0.4595
ILE 78
PRO 79
0.8268
PRO 79
CYS 80
0.9189
CYS 80
SER 81
1.1704
SER 81
ALA 82
0.7320
ALA 82
LEU 83
0.9366
LEU 83
LEU 84
1.2169
LEU 84
SER 85
0.3481
SER 85
SER 86
0.9876
SER 86
ASP 87
1.0605
ASP 87
ILE 88
0.5461
ILE 88
THR 89
0.8485
THR 89
ALA 90
0.7393
ALA 90
SER 91
0.4159
SER 91
VAL 92
0.3163
VAL 92
ASN 93
0.6470
ASN 93
CYS 94
-0.2623
CYS 94
ALA 95
0.6221
ALA 95
LYS 96
0.3699
LYS 96
LYS 97
0.6446
LYS 97
ILE 98
0.7790
ILE 98
VAL 99
0.9167
VAL 99
SER 100
0.8033
SER 100
ASP 101
1.4597
ASP 101
GLY 102
1.7391
GLY 102
ASN 103
1.6199
ASN 103
GLY 104
1.7848
GLY 104
MET 105
1.2320
MET 105
ASN 106
0.8017
ASN 106
ALA 107
1.3019
ALA 107
TRP 108
1.4289
TRP 108
VAL 109
0.8420
VAL 109
ALA 110
0.8709
ALA 110
TRP 111
0.6366
TRP 111
ARG 112
0.9569
ARG 112
ASN 113
0.7200
ASN 113
ARG 114
1.3342
ARG 114
CYS 115
0.8763
CYS 115
LYS 116
0.8728
LYS 116
GLY 117
1.8333
GLY 117
THR 118
1.6399
THR 118
ASP 119
1.4250
ASP 119
VAL 120
1.7315
VAL 120
GLN 121
1.2536
GLN 121
ALA 122
1.4308
ALA 122
TRP 123
0.3862
TRP 123
ILE 124
0.9863
ILE 124
ARG 125
1.4117
ARG 125
GLY 126
1.0831
GLY 126
CYS 127
1.4335
CYS 127
ARG 128
1.2501
ARG 128
LEU 129
0.6853
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.