CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 24  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.2254
VAL 2PHE 3 0.5463
PHE 3GLY 4 0.2896
GLY 4ARG 5 1.1341
ARG 5CYS 6 0.4649
CYS 6GLU 7 1.2437
GLU 7LEU 8 0.4481
LEU 8ALA 9 0.6668
ALA 9ALA 10 0.9362
ALA 10ALA 11 0.7097
ALA 11MET 12 0.2302
MET 12LYS 13 0.9717
LYS 13ARG 14 0.8037
ARG 14HIS 15 1.3160
HIS 15GLY 16 0.1029
GLY 16LEU 17 0.4755
LEU 17ASP 18 0.7421
ASP 18ASN 19 1.1761
ASN 19TYR 20 0.8763
TYR 20ARG 21 1.1900
ARG 21GLY 22 0.9296
GLY 22TYR 23 1.2162
TYR 23SER 24 0.7971
SER 24LEU 25 0.9344
LEU 25GLY 26 0.1889
GLY 26ASN 27 0.5252
ASN 27TRP 28 0.1658
TRP 28VAL 29 0.7417
VAL 29CYS 30 0.0380
CYS 30ALA 31 -0.3666
ALA 31ALA 32 -0.0835
ALA 32LYS 33 0.5304
LYS 33PHE 34 -0.3035
PHE 34GLU 35 0.0249
GLU 35SER 36 -0.4693
SER 36ASN 37 0.6777
ASN 37PHE 38 0.7666
PHE 38ASN 39 0.3756
ASN 39THR 40 0.2995
THR 40GLN 41 0.8276
GLN 41ALA 42 -0.1225
ALA 42THR 43 0.4838
THR 43ASN 44 0.7863
ASN 44ARG 45 1.3215
ARG 45ASN 46 1.2401
ASN 46THR 47 1.7479
THR 47ASP 48 1.7831
ASP 48GLY 49 1.1844
GLY 49SER 50 0.9240
SER 50THR 51 0.4453
THR 51ASP 52 0.8545
ASP 52TYR 53 -0.0850
TYR 53GLY 54 0.5367
GLY 54ILE 55 0.6135
ILE 55LEU 56 0.2880
LEU 56GLN 57 0.7009
GLN 57ILE 58 0.6548
ILE 58ASN 59 0.6231
ASN 59SER 60 0.1969
SER 60ARG 61 0.5241
ARG 61TRP 62 0.4988
TRP 62TRP 63 0.7774
TRP 63CYS 64 0.2324
CYS 64ASN 65 0.8012
ASN 65ASP 66 -0.2697
ASP 66GLY 67 1.4130
GLY 67ARG 68 1.2714
ARG 68THR 69 1.4051
THR 69PRO 70 1.1414
PRO 70GLY 71 1.0674
GLY 71SER 72 1.1899
SER 72ARG 73 0.0823
ARG 73ASN 74 0.6727
ASN 74LEU 75 -0.1914
LEU 75CYS 76 0.6468
CYS 76ASN 77 1.2061
ASN 77ILE 78 1.0790
ILE 78PRO 79 -0.3222
PRO 79CYS 80 0.4723
CYS 80SER 81 0.9662
SER 81ALA 82 0.2660
ALA 82LEU 83 0.4469
LEU 83LEU 84 0.2832
LEU 84SER 85 0.5815
SER 85SER 86 0.8284
SER 86ASP 87 0.2646
ASP 87ILE 88 0.6101
ILE 88THR 89 -0.4398
THR 89ALA 90 0.7255
ALA 90SER 91 0.2715
SER 91VAL 92 0.6321
VAL 92ASN 93 0.5816
ASN 93CYS 94 0.6949
CYS 94ALA 95 0.2933
ALA 95LYS 96 0.8264
LYS 96LYS 97 -0.2735
LYS 97ILE 98 0.6921
ILE 98VAL 99 0.3097
VAL 99SER 100 1.1564
SER 100ASP 101 0.2453
ASP 101GLY 102 1.0903
GLY 102ASN 103 1.3094
ASN 103GLY 104 1.3388
GLY 104MET 105 0.8855
MET 105ASN 106 0.7565
ASN 106ALA 107 -0.0061
ALA 107TRP 108 0.2355
TRP 108VAL 109 0.7430
VAL 109ALA 110 -0.0843
ALA 110TRP 111 0.6940
TRP 111ARG 112 0.6316
ARG 112ASN 113 0.8872
ASN 113ARG 114 -0.3186
ARG 114CYS 115 0.8942
CYS 115LYS 116 0.6215
LYS 116GLY 117 1.8645
GLY 117THR 118 1.8706
THR 118ASP 119 1.8526
ASP 119VAL 120 1.7907
VAL 120GLN 121 1.4050
GLN 121ALA 122 1.5432
ALA 122TRP 123 0.7804
TRP 123ILE 124 1.2256
ILE 124ARG 125 1.6576
ARG 125GLY 126 1.5289
GLY 126CYS 127 1.7282
CYS 127ARG 128 1.6388
ARG 128LEU 129 1.0206

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.