CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 25  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0994
VAL 2PHE 3 0.9710
PHE 3GLY 4 0.0439
GLY 4ARG 5 0.6996
ARG 5CYS 6 0.1364
CYS 6GLU 7 0.8321
GLU 7LEU 8 0.4662
LEU 8ALA 9 -0.7307
ALA 9ALA 10 0.7193
ALA 10ALA 11 -0.4040
ALA 11MET 12 -0.0597
MET 12LYS 13 -0.0099
LYS 13ARG 14 0.7393
ARG 14HIS 15 0.2522
HIS 15GLY 16 0.5023
GLY 16LEU 17 0.4107
LEU 17ASP 18 0.5565
ASP 18ASN 19 0.5099
ASN 19TYR 20 0.8748
TYR 20ARG 21 0.4083
ARG 21GLY 22 0.9464
GLY 22TYR 23 0.3916
TYR 23SER 24 0.2842
SER 24LEU 25 0.3369
LEU 25GLY 26 0.5656
GLY 26ASN 27 -0.4189
ASN 27TRP 28 0.7619
TRP 28VAL 29 0.4212
VAL 29CYS 30 0.6584
CYS 30ALA 31 0.6566
ALA 31ALA 32 -0.8110
ALA 32LYS 33 0.9487
LYS 33PHE 34 0.6041
PHE 34GLU 35 1.0296
GLU 35SER 36 -0.0886
SER 36ASN 37 0.8418
ASN 37PHE 38 0.9426
PHE 38ASN 39 0.0270
ASN 39THR 40 0.4692
THR 40GLN 41 0.2207
GLN 41ALA 42 0.3186
ALA 42THR 43 0.9833
THR 43ASN 44 1.1292
ASN 44ARG 45 1.3112
ARG 45ASN 46 1.3251
ASN 46THR 47 1.7638
THR 47ASP 48 1.7983
ASP 48GLY 49 1.5528
GLY 49SER 50 1.4099
SER 50THR 51 1.1746
THR 51ASP 52 0.4199
ASP 52TYR 53 0.6110
TYR 53GLY 54 0.0641
GLY 54ILE 55 0.4644
ILE 55LEU 56 -0.1073
LEU 56GLN 57 0.4540
GLN 57ILE 58 1.1577
ILE 58ASN 59 0.7929
ASN 59SER 60 0.1734
SER 60ARG 61 0.4807
ARG 61TRP 62 1.0719
TRP 62TRP 63 0.2385
TRP 63CYS 64 0.8882
CYS 64ASN 65 0.9482
ASN 65ASP 66 1.0770
ASP 66GLY 67 0.7609
GLY 67ARG 68 1.0858
ARG 68THR 69 1.0657
THR 69PRO 70 1.0179
PRO 70GLY 71 1.4260
GLY 71SER 72 1.4820
SER 72ARG 73 1.3808
ARG 73ASN 74 0.4058
ASN 74LEU 75 1.2292
LEU 75CYS 76 0.8497
CYS 76ASN 77 1.6140
ASN 77ILE 78 1.6713
ILE 78PRO 79 1.3560
PRO 79CYS 80 0.7942
CYS 80SER 81 0.4940
SER 81ALA 82 0.8039
ALA 82LEU 83 0.6132
LEU 83LEU 84 1.0024
LEU 84SER 85 -0.3764
SER 85SER 86 0.0318
SER 86ASP 87 0.8403
ASP 87ILE 88 0.7758
ILE 88THR 89 0.8314
THR 89ALA 90 -0.1616
ALA 90SER 91 0.7480
SER 91VAL 92 0.3058
VAL 92ASN 93 0.9241
ASN 93CYS 94 -0.6931
CYS 94ALA 95 0.8730
ALA 95LYS 96 0.4380
LYS 96LYS 97 0.8100
LYS 97ILE 98 1.1227
ILE 98VAL 99 0.7046
VAL 99SER 100 1.2952
SER 100ASP 101 0.9517
ASP 101GLY 102 1.7367
GLY 102ASN 103 1.5148
ASN 103GLY 104 1.6272
GLY 104MET 105 1.1894
MET 105ASN 106 0.4560
ASN 106ALA 107 0.9631
ALA 107TRP 108 1.0958
TRP 108VAL 109 1.1993
VAL 109ALA 110 0.7747
ALA 110TRP 111 0.8771
TRP 111ARG 112 0.7601
ARG 112ASN 113 0.8135
ASN 113ARG 114 1.1336
ARG 114CYS 115 0.6089
CYS 115LYS 116 0.8209
LYS 116GLY 117 0.6322
GLY 117THR 118 1.4223
THR 118ASP 119 1.2725
ASP 119VAL 120 1.3435
VAL 120GLN 121 0.8698
GLN 121ALA 122 0.8044
ALA 122TRP 123 0.6146
TRP 123ILE 124 0.5083
ILE 124ARG 125 1.2736
ARG 125GLY 126 1.2342
GLY 126CYS 127 1.4011
CYS 127ARG 128 0.6425
ARG 128LEU 129 0.7679

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.