This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0994
VAL 2
PHE 3
0.9710
PHE 3
GLY 4
0.0439
GLY 4
ARG 5
0.6996
ARG 5
CYS 6
0.1364
CYS 6
GLU 7
0.8321
GLU 7
LEU 8
0.4662
LEU 8
ALA 9
-0.7307
ALA 9
ALA 10
0.7193
ALA 10
ALA 11
-0.4040
ALA 11
MET 12
-0.0597
MET 12
LYS 13
-0.0099
LYS 13
ARG 14
0.7393
ARG 14
HIS 15
0.2522
HIS 15
GLY 16
0.5023
GLY 16
LEU 17
0.4107
LEU 17
ASP 18
0.5565
ASP 18
ASN 19
0.5099
ASN 19
TYR 20
0.8748
TYR 20
ARG 21
0.4083
ARG 21
GLY 22
0.9464
GLY 22
TYR 23
0.3916
TYR 23
SER 24
0.2842
SER 24
LEU 25
0.3369
LEU 25
GLY 26
0.5656
GLY 26
ASN 27
-0.4189
ASN 27
TRP 28
0.7619
TRP 28
VAL 29
0.4212
VAL 29
CYS 30
0.6584
CYS 30
ALA 31
0.6566
ALA 31
ALA 32
-0.8110
ALA 32
LYS 33
0.9487
LYS 33
PHE 34
0.6041
PHE 34
GLU 35
1.0296
GLU 35
SER 36
-0.0886
SER 36
ASN 37
0.8418
ASN 37
PHE 38
0.9426
PHE 38
ASN 39
0.0270
ASN 39
THR 40
0.4692
THR 40
GLN 41
0.2207
GLN 41
ALA 42
0.3186
ALA 42
THR 43
0.9833
THR 43
ASN 44
1.1292
ASN 44
ARG 45
1.3112
ARG 45
ASN 46
1.3251
ASN 46
THR 47
1.7638
THR 47
ASP 48
1.7983
ASP 48
GLY 49
1.5528
GLY 49
SER 50
1.4099
SER 50
THR 51
1.1746
THR 51
ASP 52
0.4199
ASP 52
TYR 53
0.6110
TYR 53
GLY 54
0.0641
GLY 54
ILE 55
0.4644
ILE 55
LEU 56
-0.1073
LEU 56
GLN 57
0.4540
GLN 57
ILE 58
1.1577
ILE 58
ASN 59
0.7929
ASN 59
SER 60
0.1734
SER 60
ARG 61
0.4807
ARG 61
TRP 62
1.0719
TRP 62
TRP 63
0.2385
TRP 63
CYS 64
0.8882
CYS 64
ASN 65
0.9482
ASN 65
ASP 66
1.0770
ASP 66
GLY 67
0.7609
GLY 67
ARG 68
1.0858
ARG 68
THR 69
1.0657
THR 69
PRO 70
1.0179
PRO 70
GLY 71
1.4260
GLY 71
SER 72
1.4820
SER 72
ARG 73
1.3808
ARG 73
ASN 74
0.4058
ASN 74
LEU 75
1.2292
LEU 75
CYS 76
0.8497
CYS 76
ASN 77
1.6140
ASN 77
ILE 78
1.6713
ILE 78
PRO 79
1.3560
PRO 79
CYS 80
0.7942
CYS 80
SER 81
0.4940
SER 81
ALA 82
0.8039
ALA 82
LEU 83
0.6132
LEU 83
LEU 84
1.0024
LEU 84
SER 85
-0.3764
SER 85
SER 86
0.0318
SER 86
ASP 87
0.8403
ASP 87
ILE 88
0.7758
ILE 88
THR 89
0.8314
THR 89
ALA 90
-0.1616
ALA 90
SER 91
0.7480
SER 91
VAL 92
0.3058
VAL 92
ASN 93
0.9241
ASN 93
CYS 94
-0.6931
CYS 94
ALA 95
0.8730
ALA 95
LYS 96
0.4380
LYS 96
LYS 97
0.8100
LYS 97
ILE 98
1.1227
ILE 98
VAL 99
0.7046
VAL 99
SER 100
1.2952
SER 100
ASP 101
0.9517
ASP 101
GLY 102
1.7367
GLY 102
ASN 103
1.5148
ASN 103
GLY 104
1.6272
GLY 104
MET 105
1.1894
MET 105
ASN 106
0.4560
ASN 106
ALA 107
0.9631
ALA 107
TRP 108
1.0958
TRP 108
VAL 109
1.1993
VAL 109
ALA 110
0.7747
ALA 110
TRP 111
0.8771
TRP 111
ARG 112
0.7601
ARG 112
ASN 113
0.8135
ASN 113
ARG 114
1.1336
ARG 114
CYS 115
0.6089
CYS 115
LYS 116
0.8209
LYS 116
GLY 117
0.6322
GLY 117
THR 118
1.4223
THR 118
ASP 119
1.2725
ASP 119
VAL 120
1.3435
VAL 120
GLN 121
0.8698
GLN 121
ALA 122
0.8044
ALA 122
TRP 123
0.6146
TRP 123
ILE 124
0.5083
ILE 124
ARG 125
1.2736
ARG 125
GLY 126
1.2342
GLY 126
CYS 127
1.4011
CYS 127
ARG 128
0.6425
ARG 128
LEU 129
0.7679
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.