This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.9393
VAL 2
PHE 3
1.1963
PHE 3
GLY 4
1.0839
GLY 4
ARG 5
1.0062
ARG 5
CYS 6
0.8608
CYS 6
GLU 7
0.6501
GLU 7
LEU 8
0.7608
LEU 8
ALA 9
0.5706
ALA 9
ALA 10
1.3765
ALA 10
ALA 11
1.0137
ALA 11
MET 12
0.3153
MET 12
LYS 13
1.2837
LYS 13
ARG 14
1.1193
ARG 14
HIS 15
1.4483
HIS 15
GLY 16
1.0420
GLY 16
LEU 17
1.1349
LEU 17
ASP 18
1.2657
ASP 18
ASN 19
1.3494
ASN 19
TYR 20
1.5332
TYR 20
ARG 21
1.1844
ARG 21
GLY 22
1.6185
GLY 22
TYR 23
1.6840
TYR 23
SER 24
1.2891
SER 24
LEU 25
1.0410
LEU 25
GLY 26
1.2572
GLY 26
ASN 27
0.6080
ASN 27
TRP 28
0.6960
TRP 28
VAL 29
-0.0854
VAL 29
CYS 30
0.9117
CYS 30
ALA 31
0.2155
ALA 31
ALA 32
0.2926
ALA 32
LYS 33
0.4086
LYS 33
PHE 34
0.5350
PHE 34
GLU 35
0.9950
GLU 35
SER 36
0.9617
SER 36
ASN 37
0.6341
ASN 37
PHE 38
0.0406
PHE 38
ASN 39
1.1841
ASN 39
THR 40
0.7027
THR 40
GLN 41
0.9700
GLN 41
ALA 42
1.0249
ALA 42
THR 43
0.7815
THR 43
ASN 44
0.9132
ASN 44
ARG 45
0.3856
ARG 45
ASN 46
0.9375
ASN 46
THR 47
0.7573
THR 47
ASP 48
0.5102
ASP 48
GLY 49
-0.2014
GLY 49
SER 50
0.2029
SER 50
THR 51
0.8602
THR 51
ASP 52
0.3263
ASP 52
TYR 53
-1.1562
TYR 53
GLY 54
0.8162
GLY 54
ILE 55
0.4339
ILE 55
LEU 56
0.4528
LEU 56
GLN 57
0.3349
GLN 57
ILE 58
0.8617
ILE 58
ASN 59
0.5424
ASN 59
SER 60
0.2805
SER 60
ARG 61
0.8021
ARG 61
TRP 62
-0.2131
TRP 62
TRP 63
0.1332
TRP 63
CYS 64
0.7633
CYS 64
ASN 65
0.7168
ASN 65
ASP 66
0.5490
ASP 66
GLY 67
0.4444
GLY 67
ARG 68
1.2139
ARG 68
THR 69
0.9288
THR 69
PRO 70
1.2494
PRO 70
GLY 71
0.4478
GLY 71
SER 72
1.1890
SER 72
ARG 73
0.2927
ARG 73
ASN 74
1.1826
ASN 74
LEU 75
0.8979
LEU 75
CYS 76
0.0917
CYS 76
ASN 77
1.0469
ASN 77
ILE 78
0.8032
ILE 78
PRO 79
0.9371
PRO 79
CYS 80
0.7364
CYS 80
SER 81
0.7290
SER 81
ALA 82
1.0536
ALA 82
LEU 83
0.5583
LEU 83
LEU 84
1.1846
LEU 84
SER 85
0.8245
SER 85
SER 86
1.2294
SER 86
ASP 87
1.4305
ASP 87
ILE 88
1.3838
ILE 88
THR 89
1.1759
THR 89
ALA 90
0.7037
ALA 90
SER 91
0.9605
SER 91
VAL 92
-0.5777
VAL 92
ASN 93
0.9268
ASN 93
CYS 94
0.4686
CYS 94
ALA 95
0.8964
ALA 95
LYS 96
-0.2531
LYS 96
LYS 97
0.3946
LYS 97
ILE 98
0.6636
ILE 98
VAL 99
0.9401
VAL 99
SER 100
0.6332
SER 100
ASP 101
1.3143
ASP 101
GLY 102
1.6228
GLY 102
ASN 103
1.5443
ASN 103
GLY 104
1.7653
GLY 104
MET 105
0.6916
MET 105
ASN 106
1.0486
ASN 106
ALA 107
1.1291
ALA 107
TRP 108
1.1375
TRP 108
VAL 109
0.9154
VAL 109
ALA 110
0.8173
ALA 110
TRP 111
0.7038
TRP 111
ARG 112
1.1201
ARG 112
ASN 113
0.6165
ASN 113
ARG 114
0.6682
ARG 114
CYS 115
0.9714
CYS 115
LYS 116
0.7677
LYS 116
GLY 117
1.8532
GLY 117
THR 118
1.8367
THR 118
ASP 119
1.4267
ASP 119
VAL 120
0.1853
VAL 120
GLN 121
1.2371
GLN 121
ALA 122
0.6661
ALA 122
TRP 123
-0.6507
TRP 123
ILE 124
1.2239
ILE 124
ARG 125
0.4030
ARG 125
GLY 126
1.1938
GLY 126
CYS 127
0.4030
CYS 127
ARG 128
1.3231
ARG 128
LEU 129
1.3388
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.