CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 26  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.9393
VAL 2PHE 3 1.1963
PHE 3GLY 4 1.0839
GLY 4ARG 5 1.0062
ARG 5CYS 6 0.8608
CYS 6GLU 7 0.6501
GLU 7LEU 8 0.7608
LEU 8ALA 9 0.5706
ALA 9ALA 10 1.3765
ALA 10ALA 11 1.0137
ALA 11MET 12 0.3153
MET 12LYS 13 1.2837
LYS 13ARG 14 1.1193
ARG 14HIS 15 1.4483
HIS 15GLY 16 1.0420
GLY 16LEU 17 1.1349
LEU 17ASP 18 1.2657
ASP 18ASN 19 1.3494
ASN 19TYR 20 1.5332
TYR 20ARG 21 1.1844
ARG 21GLY 22 1.6185
GLY 22TYR 23 1.6840
TYR 23SER 24 1.2891
SER 24LEU 25 1.0410
LEU 25GLY 26 1.2572
GLY 26ASN 27 0.6080
ASN 27TRP 28 0.6960
TRP 28VAL 29 -0.0854
VAL 29CYS 30 0.9117
CYS 30ALA 31 0.2155
ALA 31ALA 32 0.2926
ALA 32LYS 33 0.4086
LYS 33PHE 34 0.5350
PHE 34GLU 35 0.9950
GLU 35SER 36 0.9617
SER 36ASN 37 0.6341
ASN 37PHE 38 0.0406
PHE 38ASN 39 1.1841
ASN 39THR 40 0.7027
THR 40GLN 41 0.9700
GLN 41ALA 42 1.0249
ALA 42THR 43 0.7815
THR 43ASN 44 0.9132
ASN 44ARG 45 0.3856
ARG 45ASN 46 0.9375
ASN 46THR 47 0.7573
THR 47ASP 48 0.5102
ASP 48GLY 49 -0.2014
GLY 49SER 50 0.2029
SER 50THR 51 0.8602
THR 51ASP 52 0.3263
ASP 52TYR 53 -1.1562
TYR 53GLY 54 0.8162
GLY 54ILE 55 0.4339
ILE 55LEU 56 0.4528
LEU 56GLN 57 0.3349
GLN 57ILE 58 0.8617
ILE 58ASN 59 0.5424
ASN 59SER 60 0.2805
SER 60ARG 61 0.8021
ARG 61TRP 62 -0.2131
TRP 62TRP 63 0.1332
TRP 63CYS 64 0.7633
CYS 64ASN 65 0.7168
ASN 65ASP 66 0.5490
ASP 66GLY 67 0.4444
GLY 67ARG 68 1.2139
ARG 68THR 69 0.9288
THR 69PRO 70 1.2494
PRO 70GLY 71 0.4478
GLY 71SER 72 1.1890
SER 72ARG 73 0.2927
ARG 73ASN 74 1.1826
ASN 74LEU 75 0.8979
LEU 75CYS 76 0.0917
CYS 76ASN 77 1.0469
ASN 77ILE 78 0.8032
ILE 78PRO 79 0.9371
PRO 79CYS 80 0.7364
CYS 80SER 81 0.7290
SER 81ALA 82 1.0536
ALA 82LEU 83 0.5583
LEU 83LEU 84 1.1846
LEU 84SER 85 0.8245
SER 85SER 86 1.2294
SER 86ASP 87 1.4305
ASP 87ILE 88 1.3838
ILE 88THR 89 1.1759
THR 89ALA 90 0.7037
ALA 90SER 91 0.9605
SER 91VAL 92 -0.5777
VAL 92ASN 93 0.9268
ASN 93CYS 94 0.4686
CYS 94ALA 95 0.8964
ALA 95LYS 96 -0.2531
LYS 96LYS 97 0.3946
LYS 97ILE 98 0.6636
ILE 98VAL 99 0.9401
VAL 99SER 100 0.6332
SER 100ASP 101 1.3143
ASP 101GLY 102 1.6228
GLY 102ASN 103 1.5443
ASN 103GLY 104 1.7653
GLY 104MET 105 0.6916
MET 105ASN 106 1.0486
ASN 106ALA 107 1.1291
ALA 107TRP 108 1.1375
TRP 108VAL 109 0.9154
VAL 109ALA 110 0.8173
ALA 110TRP 111 0.7038
TRP 111ARG 112 1.1201
ARG 112ASN 113 0.6165
ASN 113ARG 114 0.6682
ARG 114CYS 115 0.9714
CYS 115LYS 116 0.7677
LYS 116GLY 117 1.8532
GLY 117THR 118 1.8367
THR 118ASP 119 1.4267
ASP 119VAL 120 0.1853
VAL 120GLN 121 1.2371
GLN 121ALA 122 0.6661
ALA 122TRP 123 -0.6507
TRP 123ILE 124 1.2239
ILE 124ARG 125 0.4030
ARG 125GLY 126 1.1938
GLY 126CYS 127 0.4030
CYS 127ARG 128 1.3231
ARG 128LEU 129 1.3388

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.