This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
1.1509
VAL 2
PHE 3
1.0478
PHE 3
GLY 4
0.8908
GLY 4
ARG 5
1.0928
ARG 5
CYS 6
0.6761
CYS 6
GLU 7
1.3493
GLU 7
LEU 8
0.7900
LEU 8
ALA 9
0.6777
ALA 9
ALA 10
0.8752
ALA 10
ALA 11
1.1370
ALA 11
MET 12
0.0673
MET 12
LYS 13
0.4889
LYS 13
ARG 14
0.9964
ARG 14
HIS 15
0.5142
HIS 15
GLY 16
1.1495
GLY 16
LEU 17
0.3065
LEU 17
ASP 18
0.8470
ASP 18
ASN 19
1.4467
ASN 19
TYR 20
1.2511
TYR 20
ARG 21
1.5674
ARG 21
GLY 22
1.2244
GLY 22
TYR 23
1.6166
TYR 23
SER 24
0.4930
SER 24
LEU 25
0.8639
LEU 25
GLY 26
0.3968
GLY 26
ASN 27
0.0515
ASN 27
TRP 28
0.4549
TRP 28
VAL 29
0.1851
VAL 29
CYS 30
0.7858
CYS 30
ALA 31
0.3457
ALA 31
ALA 32
0.6184
ALA 32
LYS 33
0.5806
LYS 33
PHE 34
1.1185
PHE 34
GLU 35
0.4513
GLU 35
SER 36
1.0589
SER 36
ASN 37
0.4940
ASN 37
PHE 38
0.8056
PHE 38
ASN 39
0.8444
ASN 39
THR 40
0.9153
THR 40
GLN 41
1.3350
GLN 41
ALA 42
0.9633
ALA 42
THR 43
0.9385
THR 43
ASN 44
1.0044
ASN 44
ARG 45
1.3575
ARG 45
ASN 46
1.0154
ASN 46
THR 47
1.0661
THR 47
ASP 48
0.7675
ASP 48
GLY 49
1.1622
GLY 49
SER 50
0.3742
SER 50
THR 51
-0.1704
THR 51
ASP 52
0.5615
ASP 52
TYR 53
0.5678
TYR 53
GLY 54
0.6024
GLY 54
ILE 55
0.6815
ILE 55
LEU 56
0.6028
LEU 56
GLN 57
0.5765
GLN 57
ILE 58
0.4772
ILE 58
ASN 59
-0.6905
ASN 59
SER 60
0.3530
SER 60
ARG 61
0.7359
ARG 61
TRP 62
0.4408
TRP 62
TRP 63
0.5721
TRP 63
CYS 64
-0.0728
CYS 64
ASN 65
0.1318
ASN 65
ASP 66
-0.3761
ASP 66
GLY 67
1.3569
GLY 67
ARG 68
1.0620
ARG 68
THR 69
1.3185
THR 69
PRO 70
1.2824
PRO 70
GLY 71
1.1525
GLY 71
SER 72
1.4671
SER 72
ARG 73
1.1515
ARG 73
ASN 74
1.2682
ASN 74
LEU 75
0.0004
LEU 75
CYS 76
1.0066
CYS 76
ASN 77
0.5021
ASN 77
ILE 78
0.9698
ILE 78
PRO 79
0.6318
PRO 79
CYS 80
0.3796
CYS 80
SER 81
1.1324
SER 81
ALA 82
0.1515
ALA 82
LEU 83
0.6421
LEU 83
LEU 84
1.2404
LEU 84
SER 85
0.5208
SER 85
SER 86
0.8779
SER 86
ASP 87
1.0957
ASP 87
ILE 88
1.1706
ILE 88
THR 89
0.7740
THR 89
ALA 90
-0.4148
ALA 90
SER 91
0.3161
SER 91
VAL 92
0.8164
VAL 92
ASN 93
0.5372
ASN 93
CYS 94
0.0479
CYS 94
ALA 95
0.4116
ALA 95
LYS 96
1.2190
LYS 96
LYS 97
0.7867
LYS 97
ILE 98
0.8632
ILE 98
VAL 99
0.9632
VAL 99
SER 100
1.3968
SER 100
ASP 101
1.5320
ASP 101
GLY 102
1.7701
GLY 102
ASN 103
1.6053
ASN 103
GLY 104
1.5904
GLY 104
MET 105
1.2921
MET 105
ASN 106
1.2064
ASN 106
ALA 107
1.3145
ALA 107
TRP 108
0.3369
TRP 108
VAL 109
1.4004
VAL 109
ALA 110
1.1009
ALA 110
TRP 111
0.9746
TRP 111
ARG 112
1.4867
ARG 112
ASN 113
0.9113
ASN 113
ARG 114
1.4302
ARG 114
CYS 115
0.5760
CYS 115
LYS 116
1.3303
LYS 116
GLY 117
1.5933
GLY 117
THR 118
1.0394
THR 118
ASP 119
1.6951
ASP 119
VAL 120
1.7258
VAL 120
GLN 121
0.8300
GLN 121
ALA 122
1.2831
ALA 122
TRP 123
1.4880
TRP 123
ILE 124
0.5517
ILE 124
ARG 125
1.5156
ARG 125
GLY 126
1.4492
GLY 126
CYS 127
1.3412
CYS 127
ARG 128
0.3839
ARG 128
LEU 129
0.4238
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.