CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 28  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 1.2621
VAL 2PHE 3 1.2847
PHE 3GLY 4 0.9177
GLY 4ARG 5 1.0976
ARG 5CYS 6 -0.0435
CYS 6GLU 7 0.8856
GLU 7LEU 8 0.4896
LEU 8ALA 9 0.6536
ALA 9ALA 10 0.6558
ALA 10ALA 11 0.9189
ALA 11MET 12 0.5719
MET 12LYS 13 1.0590
LYS 13ARG 14 0.5376
ARG 14HIS 15 1.3790
HIS 15GLY 16 1.3502
GLY 16LEU 17 0.6669
LEU 17ASP 18 1.0862
ASP 18ASN 19 1.4259
ASN 19TYR 20 1.4220
TYR 20ARG 21 0.8409
ARG 21GLY 22 1.4387
GLY 22TYR 23 1.4054
TYR 23SER 24 0.3738
SER 24LEU 25 1.1062
LEU 25GLY 26 0.0804
GLY 26ASN 27 0.3746
ASN 27TRP 28 0.8074
TRP 28VAL 29 0.7764
VAL 29CYS 30 0.8724
CYS 30ALA 31 0.3187
ALA 31ALA 32 0.7713
ALA 32LYS 33 0.7776
LYS 33PHE 34 0.5546
PHE 34GLU 35 0.7096
GLU 35SER 36 0.5510
SER 36ASN 37 0.8383
ASN 37PHE 38 0.8572
PHE 38ASN 39 0.9784
ASN 39THR 40 1.1231
THR 40GLN 41 0.7719
GLN 41ALA 42 0.9363
ALA 42THR 43 0.3119
THR 43ASN 44 1.2374
ASN 44ARG 45 0.8849
ARG 45ASN 46 1.2635
ASN 46THR 47 1.5436
THR 47ASP 48 1.1812
ASP 48GLY 49 0.6780
GLY 49SER 50 0.2886
SER 50THR 51 0.7050
THR 51ASP 52 0.7386
ASP 52TYR 53 0.9946
TYR 53GLY 54 0.5246
GLY 54ILE 55 0.6039
ILE 55LEU 56 0.4187
LEU 56GLN 57 -0.0633
GLN 57ILE 58 0.4683
ILE 58ASN 59 1.2012
ASN 59SER 60 -0.3197
SER 60ARG 61 0.5854
ARG 61TRP 62 0.8006
TRP 62TRP 63 0.8497
TRP 63CYS 64 1.0334
CYS 64ASN 65 0.7343
ASN 65ASP 66 1.1118
ASP 66GLY 67 0.7181
GLY 67ARG 68 1.1950
ARG 68THR 69 1.1289
THR 69PRO 70 1.1095
PRO 70GLY 71 1.4749
GLY 71SER 72 1.4440
SER 72ARG 73 1.4784
ARG 73ASN 74 1.5343
ASN 74LEU 75 1.2762
LEU 75CYS 76 1.2990
CYS 76ASN 77 1.7432
ASN 77ILE 78 1.7167
ILE 78PRO 79 0.6589
PRO 79CYS 80 1.3397
CYS 80SER 81 0.7227
SER 81ALA 82 0.5392
ALA 82LEU 83 1.0189
LEU 83LEU 84 0.8848
LEU 84SER 85 0.9426
SER 85SER 86 0.9977
SER 86ASP 87 0.9356
ASP 87ILE 88 1.2294
ILE 88THR 89 -0.4226
THR 89ALA 90 0.7134
ALA 90SER 91 0.4526
SER 91VAL 92 0.6453
VAL 92ASN 93 -0.8619
ASN 93CYS 94 0.6813
CYS 94ALA 95 -0.2682
ALA 95LYS 96 0.5403
LYS 96LYS 97 0.6697
LYS 97ILE 98 0.3955
ILE 98VAL 99 0.2704
VAL 99SER 100 0.6492
SER 100ASP 101 -0.2426
ASP 101GLY 102 0.5467
GLY 102ASN 103 1.5348
ASN 103GLY 104 1.0504
GLY 104MET 105 -0.5529
MET 105ASN 106 0.2764
ASN 106ALA 107 0.9471
ALA 107TRP 108 -0.2238
TRP 108VAL 109 1.0825
VAL 109ALA 110 -1.3416
ALA 110TRP 111 0.2072
TRP 111ARG 112 0.5820
ARG 112ASN 113 0.1735
ASN 113ARG 114 0.4400
ARG 114CYS 115 0.1565
CYS 115LYS 116 0.4351
LYS 116GLY 117 1.6810
GLY 117THR 118 1.6918
THR 118ASP 119 1.5488
ASP 119VAL 120 1.4622
VAL 120GLN 121 1.0247
GLN 121ALA 122 0.9654
ALA 122TRP 123 0.5153
TRP 123ILE 124 0.2493
ILE 124ARG 125 1.3699
ARG 125GLY 126 1.3913
GLY 126CYS 127 1.5882
CYS 127ARG 128 0.7660
ARG 128LEU 129 1.2462

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.