CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 29  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 1.0521
VAL 2PHE 3 0.6152
PHE 3GLY 4 0.8482
GLY 4ARG 5 1.1275
ARG 5CYS 6 0.8045
CYS 6GLU 7 1.1480
GLU 7LEU 8 1.1385
LEU 8ALA 9 1.0321
ALA 9ALA 10 0.5605
ALA 10ALA 11 0.8460
ALA 11MET 12 0.9215
MET 12LYS 13 0.6659
LYS 13ARG 14 0.8152
ARG 14HIS 15 1.1560
HIS 15GLY 16 0.2857
GLY 16LEU 17 0.2963
LEU 17ASP 18 0.9036
ASP 18ASN 19 1.2534
ASN 19TYR 20 0.9374
TYR 20ARG 21 1.2412
ARG 21GLY 22 0.8764
GLY 22TYR 23 1.3503
TYR 23SER 24 1.0199
SER 24LEU 25 0.8432
LEU 25GLY 26 0.3814
GLY 26ASN 27 1.0203
ASN 27TRP 28 0.9456
TRP 28VAL 29 0.8452
VAL 29CYS 30 1.0426
CYS 30ALA 31 0.7599
ALA 31ALA 32 0.7288
ALA 32LYS 33 0.4556
LYS 33PHE 34 0.7292
PHE 34GLU 35 0.9097
GLU 35SER 36 0.3075
SER 36ASN 37 1.0769
ASN 37PHE 38 0.6712
PHE 38ASN 39 1.0013
ASN 39THR 40 1.1567
THR 40GLN 41 0.6587
GLN 41ALA 42 0.9596
ALA 42THR 43 0.6111
THR 43ASN 44 0.8031
ASN 44ARG 45 0.9817
ARG 45ASN 46 0.3212
ASN 46THR 47 1.6363
THR 47ASP 48 1.6983
ASP 48GLY 49 1.5259
GLY 49SER 50 0.1574
SER 50THR 51 -0.3254
THR 51ASP 52 -0.2365
ASP 52TYR 53 0.6803
TYR 53GLY 54 -0.4326
GLY 54ILE 55 1.0172
ILE 55LEU 56 0.5195
LEU 56GLN 57 0.5746
GLN 57ILE 58 0.7755
ILE 58ASN 59 -0.0141
ASN 59SER 60 0.5888
SER 60ARG 61 0.4377
ARG 61TRP 62 0.5213
TRP 62TRP 63 -0.3501
TRP 63CYS 64 0.9402
CYS 64ASN 65 1.0325
ASN 65ASP 66 0.5544
ASP 66GLY 67 1.1632
GLY 67ARG 68 1.6449
ARG 68THR 69 0.9620
THR 69PRO 70 1.1853
PRO 70GLY 71 -0.2390
GLY 71SER 72 1.4718
SER 72ARG 73 0.6696
ARG 73ASN 74 1.4311
ASN 74LEU 75 1.0738
LEU 75CYS 76 0.9442
CYS 76ASN 77 1.5956
ASN 77ILE 78 1.5719
ILE 78PRO 79 1.3125
PRO 79CYS 80 1.2535
CYS 80SER 81 0.9891
SER 81ALA 82 0.8792
ALA 82LEU 83 1.0508
LEU 83LEU 84 0.7781
LEU 84SER 85 -0.3986
SER 85SER 86 -0.4643
SER 86ASP 87 0.8484
ASP 87ILE 88 1.3626
ILE 88THR 89 -0.8993
THR 89ALA 90 0.3288
ALA 90SER 91 0.5306
SER 91VAL 92 0.9496
VAL 92ASN 93 -0.1064
ASN 93CYS 94 0.1895
CYS 94ALA 95 0.7749
ALA 95LYS 96 -0.2754
LYS 96LYS 97 0.7803
LYS 97ILE 98 0.7786
ILE 98VAL 99 -0.2029
VAL 99SER 100 1.1088
SER 100ASP 101 0.9501
ASP 101GLY 102 1.4026
GLY 102ASN 103 1.6435
ASN 103GLY 104 1.2699
GLY 104MET 105 0.4693
MET 105ASN 106 1.1144
ASN 106ALA 107 0.5488
ALA 107TRP 108 0.6356
TRP 108VAL 109 1.2627
VAL 109ALA 110 0.9854
ALA 110TRP 111 0.7409
TRP 111ARG 112 1.3453
ARG 112ASN 113 0.3602
ASN 113ARG 114 1.2573
ARG 114CYS 115 1.0987
CYS 115LYS 116 1.1385
LYS 116GLY 117 1.8008
GLY 117THR 118 1.8336
THR 118ASP 119 1.6193
ASP 119VAL 120 1.5704
VAL 120GLN 121 1.3963
GLN 121ALA 122 1.0464
ALA 122TRP 123 0.3304
TRP 123ILE 124 1.0696
ILE 124ARG 125 1.1790
ARG 125GLY 126 1.4309
GLY 126CYS 127 0.8047
CYS 127ARG 128 1.1513
ARG 128LEU 129 1.0477

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.