This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
1.1603
VAL 2
PHE 3
1.0515
PHE 3
GLY 4
-0.6263
GLY 4
ARG 5
1.2480
ARG 5
CYS 6
1.1248
CYS 6
GLU 7
0.9054
GLU 7
LEU 8
1.0371
LEU 8
ALA 9
0.2538
ALA 9
ALA 10
1.0018
ALA 10
ALA 11
0.6382
ALA 11
MET 12
1.0805
MET 12
LYS 13
0.6709
LYS 13
ARG 14
0.8836
ARG 14
HIS 15
0.8270
HIS 15
GLY 16
0.7376
GLY 16
LEU 17
1.0429
LEU 17
ASP 18
-0.1898
ASP 18
ASN 19
0.9925
ASN 19
TYR 20
-0.0046
TYR 20
ARG 21
0.7035
ARG 21
GLY 22
0.4046
GLY 22
TYR 23
1.1186
TYR 23
SER 24
0.6935
SER 24
LEU 25
0.7745
LEU 25
GLY 26
0.9227
GLY 26
ASN 27
0.8166
ASN 27
TRP 28
0.6240
TRP 28
VAL 29
0.8420
VAL 29
CYS 30
1.2470
CYS 30
ALA 31
0.1266
ALA 31
ALA 32
1.1415
ALA 32
LYS 33
0.9295
LYS 33
PHE 34
1.1437
PHE 34
GLU 35
0.3976
GLU 35
SER 36
1.2831
SER 36
ASN 37
0.7559
ASN 37
PHE 38
1.2481
PHE 38
ASN 39
0.8356
ASN 39
THR 40
1.1825
THR 40
GLN 41
0.3272
GLN 41
ALA 42
1.2221
ALA 42
THR 43
0.6851
THR 43
ASN 44
1.0021
ASN 44
ARG 45
0.8982
ARG 45
ASN 46
0.8241
ASN 46
THR 47
0.8884
THR 47
ASP 48
0.8168
ASP 48
GLY 49
0.6244
GLY 49
SER 50
0.6043
SER 50
THR 51
0.5270
THR 51
ASP 52
0.5980
ASP 52
TYR 53
0.9071
TYR 53
GLY 54
0.6527
GLY 54
ILE 55
0.5752
ILE 55
LEU 56
1.1064
LEU 56
GLN 57
0.8155
GLN 57
ILE 58
0.9515
ILE 58
ASN 59
0.8357
ASN 59
SER 60
-0.3125
SER 60
ARG 61
0.9194
ARG 61
TRP 62
0.7132
TRP 62
TRP 63
0.9126
TRP 63
CYS 64
0.5147
CYS 64
ASN 65
-0.7384
ASN 65
ASP 66
-0.2941
ASP 66
GLY 67
1.1792
GLY 67
ARG 68
1.0780
ARG 68
THR 69
0.9917
THR 69
PRO 70
1.2304
PRO 70
GLY 71
0.9513
GLY 71
SER 72
1.3858
SER 72
ARG 73
0.8082
ARG 73
ASN 74
1.3936
ASN 74
LEU 75
-0.7140
LEU 75
CYS 76
0.9930
CYS 76
ASN 77
1.4830
ASN 77
ILE 78
1.3508
ILE 78
PRO 79
0.1666
PRO 79
CYS 80
0.5718
CYS 80
SER 81
0.9835
SER 81
ALA 82
0.8112
ALA 82
LEU 83
0.8920
LEU 83
LEU 84
0.7304
LEU 84
SER 85
1.0891
SER 85
SER 86
1.0073
SER 86
ASP 87
1.0612
ASP 87
ILE 88
1.0943
ILE 88
THR 89
0.6960
THR 89
ALA 90
0.9516
ALA 90
SER 91
0.7405
SER 91
VAL 92
0.4469
VAL 92
ASN 93
0.1287
ASN 93
CYS 94
1.0323
CYS 94
ALA 95
0.0288
ALA 95
LYS 96
0.7078
LYS 96
LYS 97
0.8310
LYS 97
ILE 98
0.7609
ILE 98
VAL 99
0.8652
VAL 99
SER 100
1.3011
SER 100
ASP 101
0.9883
ASP 101
GLY 102
1.6298
GLY 102
ASN 103
1.7903
ASN 103
GLY 104
1.0866
GLY 104
MET 105
1.0834
MET 105
ASN 106
1.1217
ASN 106
ALA 107
0.8738
ALA 107
TRP 108
0.5678
TRP 108
VAL 109
1.5720
VAL 109
ALA 110
1.0238
ALA 110
TRP 111
0.9389
TRP 111
ARG 112
1.0374
ARG 112
ASN 113
1.1209
ASN 113
ARG 114
1.1985
ARG 114
CYS 115
1.2274
CYS 115
LYS 116
0.6650
LYS 116
GLY 117
1.6248
GLY 117
THR 118
1.3434
THR 118
ASP 119
1.1148
ASP 119
VAL 120
0.5594
VAL 120
GLN 121
0.5685
GLN 121
ALA 122
0.0140
ALA 122
TRP 123
-0.3680
TRP 123
ILE 124
0.9133
ILE 124
ARG 125
0.5610
ARG 125
GLY 126
0.2801
GLY 126
CYS 127
1.3353
CYS 127
ARG 128
1.0912
ARG 128
LEU 129
0.3573
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.