CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 30  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 1.1603
VAL 2PHE 3 1.0515
PHE 3GLY 4 -0.6263
GLY 4ARG 5 1.2480
ARG 5CYS 6 1.1248
CYS 6GLU 7 0.9054
GLU 7LEU 8 1.0371
LEU 8ALA 9 0.2538
ALA 9ALA 10 1.0018
ALA 10ALA 11 0.6382
ALA 11MET 12 1.0805
MET 12LYS 13 0.6709
LYS 13ARG 14 0.8836
ARG 14HIS 15 0.8270
HIS 15GLY 16 0.7376
GLY 16LEU 17 1.0429
LEU 17ASP 18 -0.1898
ASP 18ASN 19 0.9925
ASN 19TYR 20 -0.0046
TYR 20ARG 21 0.7035
ARG 21GLY 22 0.4046
GLY 22TYR 23 1.1186
TYR 23SER 24 0.6935
SER 24LEU 25 0.7745
LEU 25GLY 26 0.9227
GLY 26ASN 27 0.8166
ASN 27TRP 28 0.6240
TRP 28VAL 29 0.8420
VAL 29CYS 30 1.2470
CYS 30ALA 31 0.1266
ALA 31ALA 32 1.1415
ALA 32LYS 33 0.9295
LYS 33PHE 34 1.1437
PHE 34GLU 35 0.3976
GLU 35SER 36 1.2831
SER 36ASN 37 0.7559
ASN 37PHE 38 1.2481
PHE 38ASN 39 0.8356
ASN 39THR 40 1.1825
THR 40GLN 41 0.3272
GLN 41ALA 42 1.2221
ALA 42THR 43 0.6851
THR 43ASN 44 1.0021
ASN 44ARG 45 0.8982
ARG 45ASN 46 0.8241
ASN 46THR 47 0.8884
THR 47ASP 48 0.8168
ASP 48GLY 49 0.6244
GLY 49SER 50 0.6043
SER 50THR 51 0.5270
THR 51ASP 52 0.5980
ASP 52TYR 53 0.9071
TYR 53GLY 54 0.6527
GLY 54ILE 55 0.5752
ILE 55LEU 56 1.1064
LEU 56GLN 57 0.8155
GLN 57ILE 58 0.9515
ILE 58ASN 59 0.8357
ASN 59SER 60 -0.3125
SER 60ARG 61 0.9194
ARG 61TRP 62 0.7132
TRP 62TRP 63 0.9126
TRP 63CYS 64 0.5147
CYS 64ASN 65 -0.7384
ASN 65ASP 66 -0.2941
ASP 66GLY 67 1.1792
GLY 67ARG 68 1.0780
ARG 68THR 69 0.9917
THR 69PRO 70 1.2304
PRO 70GLY 71 0.9513
GLY 71SER 72 1.3858
SER 72ARG 73 0.8082
ARG 73ASN 74 1.3936
ASN 74LEU 75 -0.7140
LEU 75CYS 76 0.9930
CYS 76ASN 77 1.4830
ASN 77ILE 78 1.3508
ILE 78PRO 79 0.1666
PRO 79CYS 80 0.5718
CYS 80SER 81 0.9835
SER 81ALA 82 0.8112
ALA 82LEU 83 0.8920
LEU 83LEU 84 0.7304
LEU 84SER 85 1.0891
SER 85SER 86 1.0073
SER 86ASP 87 1.0612
ASP 87ILE 88 1.0943
ILE 88THR 89 0.6960
THR 89ALA 90 0.9516
ALA 90SER 91 0.7405
SER 91VAL 92 0.4469
VAL 92ASN 93 0.1287
ASN 93CYS 94 1.0323
CYS 94ALA 95 0.0288
ALA 95LYS 96 0.7078
LYS 96LYS 97 0.8310
LYS 97ILE 98 0.7609
ILE 98VAL 99 0.8652
VAL 99SER 100 1.3011
SER 100ASP 101 0.9883
ASP 101GLY 102 1.6298
GLY 102ASN 103 1.7903
ASN 103GLY 104 1.0866
GLY 104MET 105 1.0834
MET 105ASN 106 1.1217
ASN 106ALA 107 0.8738
ALA 107TRP 108 0.5678
TRP 108VAL 109 1.5720
VAL 109ALA 110 1.0238
ALA 110TRP 111 0.9389
TRP 111ARG 112 1.0374
ARG 112ASN 113 1.1209
ASN 113ARG 114 1.1985
ARG 114CYS 115 1.2274
CYS 115LYS 116 0.6650
LYS 116GLY 117 1.6248
GLY 117THR 118 1.3434
THR 118ASP 119 1.1148
ASP 119VAL 120 0.5594
VAL 120GLN 121 0.5685
GLN 121ALA 122 0.0140
ALA 122TRP 123 -0.3680
TRP 123ILE 124 0.9133
ILE 124ARG 125 0.5610
ARG 125GLY 126 0.2801
GLY 126CYS 127 1.3353
CYS 127ARG 128 1.0912
ARG 128LEU 129 0.3573

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.