This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
1.2709
VAL 2
PHE 3
1.1873
PHE 3
GLY 4
1.2317
GLY 4
ARG 5
1.1837
ARG 5
CYS 6
0.1099
CYS 6
GLU 7
1.1030
GLU 7
LEU 8
1.2452
LEU 8
ALA 9
0.8174
ALA 9
ALA 10
0.5638
ALA 10
ALA 11
0.6910
ALA 11
MET 12
0.3043
MET 12
LYS 13
0.5819
LYS 13
ARG 14
1.1002
ARG 14
HIS 15
0.4295
HIS 15
GLY 16
1.0243
GLY 16
LEU 17
0.9431
LEU 17
ASP 18
0.4456
ASP 18
ASN 19
1.1714
ASN 19
TYR 20
0.4990
TYR 20
ARG 21
1.1837
ARG 21
GLY 22
0.2256
GLY 22
TYR 23
0.8592
TYR 23
SER 24
0.3568
SER 24
LEU 25
1.0699
LEU 25
GLY 26
0.8819
GLY 26
ASN 27
-0.6763
ASN 27
TRP 28
1.0181
TRP 28
VAL 29
0.2608
VAL 29
CYS 30
0.5537
CYS 30
ALA 31
0.9009
ALA 31
ALA 32
0.5662
ALA 32
LYS 33
-0.4786
LYS 33
PHE 34
0.3556
PHE 34
GLU 35
0.8005
GLU 35
SER 36
1.0192
SER 36
ASN 37
1.0407
ASN 37
PHE 38
0.8816
PHE 38
ASN 39
1.3197
ASN 39
THR 40
0.7792
THR 40
GLN 41
1.2133
GLN 41
ALA 42
1.2305
ALA 42
THR 43
0.9802
THR 43
ASN 44
1.0116
ASN 44
ARG 45
1.6272
ARG 45
ASN 46
0.6466
ASN 46
THR 47
1.6721
THR 47
ASP 48
1.4835
ASP 48
GLY 49
1.3937
GLY 49
SER 50
1.0132
SER 50
THR 51
0.6806
THR 51
ASP 52
1.1259
ASP 52
TYR 53
0.1355
TYR 53
GLY 54
0.8391
GLY 54
ILE 55
0.8338
ILE 55
LEU 56
1.0599
LEU 56
GLN 57
1.0134
GLN 57
ILE 58
1.2896
ILE 58
ASN 59
0.7152
ASN 59
SER 60
0.4984
SER 60
ARG 61
0.0739
ARG 61
TRP 62
0.7203
TRP 62
TRP 63
0.4196
TRP 63
CYS 64
0.3206
CYS 64
ASN 65
1.1395
ASN 65
ASP 66
0.7933
ASP 66
GLY 67
1.3695
GLY 67
ARG 68
1.7388
ARG 68
THR 69
1.3991
THR 69
PRO 70
1.2113
PRO 70
GLY 71
1.1712
GLY 71
SER 72
1.2499
SER 72
ARG 73
0.9706
ARG 73
ASN 74
1.1005
ASN 74
LEU 75
0.4294
LEU 75
CYS 76
1.0751
CYS 76
ASN 77
1.6028
ASN 77
ILE 78
1.6681
ILE 78
PRO 79
1.2936
PRO 79
CYS 80
1.2056
CYS 80
SER 81
0.9417
SER 81
ALA 82
0.7950
ALA 82
LEU 83
0.8219
LEU 83
LEU 84
1.2675
LEU 84
SER 85
1.0155
SER 85
SER 86
1.4912
SER 86
ASP 87
1.4624
ASP 87
ILE 88
1.0390
ILE 88
THR 89
0.8438
THR 89
ALA 90
-0.2840
ALA 90
SER 91
0.3012
SER 91
VAL 92
0.8654
VAL 92
ASN 93
-0.4507
ASN 93
CYS 94
0.4212
CYS 94
ALA 95
0.4983
ALA 95
LYS 96
0.8001
LYS 96
LYS 97
-0.3010
LYS 97
ILE 98
0.1646
ILE 98
VAL 99
0.9129
VAL 99
SER 100
0.9168
SER 100
ASP 101
1.1281
ASP 101
GLY 102
1.3667
GLY 102
ASN 103
1.6585
ASN 103
GLY 104
1.5733
GLY 104
MET 105
0.7635
MET 105
ASN 106
0.3667
ASN 106
ALA 107
0.6098
ALA 107
TRP 108
-0.4924
TRP 108
VAL 109
0.8557
VAL 109
ALA 110
0.0554
ALA 110
TRP 111
1.0046
TRP 111
ARG 112
-0.8440
ARG 112
ASN 113
0.7139
ASN 113
ARG 114
0.6146
ARG 114
CYS 115
1.1406
CYS 115
LYS 116
-0.2435
LYS 116
GLY 117
1.5444
GLY 117
THR 118
1.6103
THR 118
ASP 119
1.2065
ASP 119
VAL 120
1.3753
VAL 120
GLN 121
0.2622
GLN 121
ALA 122
0.6617
ALA 122
TRP 123
1.3034
TRP 123
ILE 124
0.6051
ILE 124
ARG 125
1.3653
ARG 125
GLY 126
1.4849
GLY 126
CYS 127
1.5150
CYS 127
ARG 128
0.9128
ARG 128
LEU 129
1.3239
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.