CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.3937
VAL 2PHE 3 0.4815
PHE 3GLY 4 0.6087
GLY 4ARG 5 0.7140
ARG 5CYS 6 0.7584
CYS 6GLU 7 0.7573
GLU 7LEU 8 0.3197
LEU 8ALA 9 0.6478
ALA 9ALA 10 0.7991
ALA 10ALA 11 0.8582
ALA 11MET 12 0.1443
MET 12LYS 13 0.6674
LYS 13ARG 14 0.4267
ARG 14HIS 15 0.8234
HIS 15GLY 16 0.1666
GLY 16LEU 17 0.4070
LEU 17ASP 18 0.7016
ASP 18ASN 19 -0.1316
ASN 19TYR 20 0.7552
TYR 20ARG 21 0.1833
ARG 21GLY 22 0.6831
GLY 22TYR 23 0.1142
TYR 23SER 24 0.5812
SER 24LEU 25 0.0998
LEU 25GLY 26 0.5351
GLY 26ASN 27 0.5058
ASN 27TRP 28 0.6661
TRP 28VAL 29 0.2168
VAL 29CYS 30 0.6361
CYS 30ALA 31 0.5370
ALA 31ALA 32 0.5623
ALA 32LYS 33 0.4728
LYS 33PHE 34 0.6451
PHE 34GLU 35 0.7601
GLU 35SER 36 0.5781
SER 36ASN 37 0.0069
ASN 37PHE 38 0.3219
PHE 38ASN 39 0.4779
ASN 39THR 40 0.1356
THR 40GLN 41 0.1963
GLN 41ALA 42 0.2136
ALA 42THR 43 0.6762
THR 43ASN 44 0.9942
ASN 44ARG 45 1.3463
ARG 45ASN 46 1.2197
ASN 46THR 47 1.5027
THR 47ASP 48 0.7569
ASP 48GLY 49 1.3659
GLY 49SER 50 1.3731
SER 50THR 51 1.3124
THR 51ASP 52 1.1614
ASP 52TYR 53 0.7135
TYR 53GLY 54 0.6086
GLY 54ILE 55 0.0291
ILE 55LEU 56 0.0597
LEU 56GLN 57 -0.0870
GLN 57ILE 58 0.4894
ILE 58ASN 59 0.9857
ASN 59SER 60 1.0880
SER 60ARG 61 1.1568
ARG 61TRP 62 1.0544
TRP 62TRP 63 1.2325
TRP 63CYS 64 0.7639
CYS 64ASN 65 1.0821
ASN 65ASP 66 0.2713
ASP 66GLY 67 1.3159
GLY 67ARG 68 1.1015
ARG 68THR 69 1.1557
THR 69PRO 70 1.3245
PRO 70GLY 71 0.9684
GLY 71SER 72 1.3619
SER 72ARG 73 0.7475
ARG 73ASN 74 1.1466
ASN 74LEU 75 0.9951
LEU 75CYS 76 0.7048
CYS 76ASN 77 1.0174
ASN 77ILE 78 0.0793
ILE 78PRO 79 0.7535
PRO 79CYS 80 0.7449
CYS 80SER 81 0.3018
SER 81ALA 82 0.7634
ALA 82LEU 83 0.6498
LEU 83LEU 84 -0.1539
LEU 84SER 85 0.5231
SER 85SER 86 0.6647
SER 86ASP 87 -0.4234
ASP 87ILE 88 -0.0080
ILE 88THR 89 -0.1666
THR 89ALA 90 0.8555
ALA 90SER 91 0.1584
SER 91VAL 92 0.4052
VAL 92ASN 93 0.3542
ASN 93CYS 94 0.0305
CYS 94ALA 95 0.2795
ALA 95LYS 96 0.0200
LYS 96LYS 97 0.2480
LYS 97ILE 98 0.0361
ILE 98VAL 99 -0.1111
VAL 99SER 100 0.4486
SER 100ASP 101 0.0712
ASP 101GLY 102 0.1780
GLY 102ASN 103 0.8137
ASN 103GLY 104 0.4632
GLY 104MET 105 0.3301
MET 105ASN 106 0.7004
ASN 106ALA 107 0.4225
ALA 107TRP 108 0.4957
TRP 108VAL 109 0.6773
VAL 109ALA 110 0.4882
ALA 110TRP 111 0.4907
TRP 111ARG 112 0.6798
ARG 112ASN 113 0.5467
ASN 113ARG 114 0.5237
ARG 114CYS 115 0.5440
CYS 115LYS 116 0.2195
LYS 116GLY 117 0.8672
GLY 117THR 118 0.2616
THR 118ASP 119 0.5998
ASP 119VAL 120 0.9217
VAL 120GLN 121 0.7157
GLN 121ALA 122 0.3760
ALA 122TRP 123 0.9737
TRP 123ILE 124 0.6844
ILE 124ARG 125 0.9019
ARG 125GLY 126 0.3947
GLY 126CYS 127 0.9987
CYS 127ARG 128 1.4624
ARG 128LEU 129 1.2624

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.