This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.3153
VAL 2
PHE 3
0.4472
PHE 3
GLY 4
0.7436
GLY 4
ARG 5
0.0826
ARG 5
CYS 6
0.9237
CYS 6
GLU 7
0.7673
GLU 7
LEU 8
0.6356
LEU 8
ALA 9
0.5010
ALA 9
ALA 10
0.4685
ALA 10
ALA 11
0.7077
ALA 11
MET 12
0.4417
MET 12
LYS 13
0.7355
LYS 13
ARG 14
0.0888
ARG 14
HIS 15
0.5145
HIS 15
GLY 16
0.6835
GLY 16
LEU 17
0.4735
LEU 17
ASP 18
0.2808
ASP 18
ASN 19
0.6649
ASN 19
TYR 20
0.0931
TYR 20
ARG 21
0.6399
ARG 21
GLY 22
-0.0902
GLY 22
TYR 23
0.6849
TYR 23
SER 24
0.5658
SER 24
LEU 25
0.5992
LEU 25
GLY 26
0.6086
GLY 26
ASN 27
0.6746
ASN 27
TRP 28
0.1380
TRP 28
VAL 29
0.6848
VAL 29
CYS 30
0.4910
CYS 30
ALA 31
0.4125
ALA 31
ALA 32
0.2059
ALA 32
LYS 33
0.6575
LYS 33
PHE 34
0.5760
PHE 34
GLU 35
0.6272
GLU 35
SER 36
-0.0076
SER 36
ASN 37
0.8025
ASN 37
PHE 38
0.3966
PHE 38
ASN 39
0.6624
ASN 39
THR 40
0.0986
THR 40
GLN 41
0.6406
GLN 41
ALA 42
0.4523
ALA 42
THR 43
1.1794
THR 43
ASN 44
1.1141
ASN 44
ARG 45
1.3492
ARG 45
ASN 46
1.3157
ASN 46
THR 47
1.4700
THR 47
ASP 48
1.3978
ASP 48
GLY 49
1.2815
GLY 49
SER 50
1.2534
SER 50
THR 51
1.1459
THR 51
ASP 52
0.9917
ASP 52
TYR 53
0.9775
TYR 53
GLY 54
0.7778
GLY 54
ILE 55
0.6554
ILE 55
LEU 56
-0.1692
LEU 56
GLN 57
0.2555
GLN 57
ILE 58
0.7283
ILE 58
ASN 59
1.0649
ASN 59
SER 60
0.0939
SER 60
ARG 61
1.2098
ARG 61
TRP 62
0.9452
TRP 62
TRP 63
1.1924
TRP 63
CYS 64
0.6667
CYS 64
ASN 65
0.2276
ASN 65
ASP 66
1.1800
ASP 66
GLY 67
-0.2627
GLY 67
ARG 68
1.3179
ARG 68
THR 69
1.1170
THR 69
PRO 70
1.1515
PRO 70
GLY 71
1.2913
GLY 71
SER 72
1.2057
SER 72
ARG 73
1.1739
ARG 73
ASN 74
1.1613
ASN 74
LEU 75
0.4754
LEU 75
CYS 76
1.0489
CYS 76
ASN 77
1.0021
ASN 77
ILE 78
1.0827
ILE 78
PRO 79
0.8947
PRO 79
CYS 80
0.8575
CYS 80
SER 81
0.7681
SER 81
ALA 82
0.7039
ALA 82
LEU 83
0.4999
LEU 83
LEU 84
0.5646
LEU 84
SER 85
0.6876
SER 85
SER 86
0.2949
SER 86
ASP 87
0.1153
ASP 87
ILE 88
0.0944
ILE 88
THR 89
-0.1787
THR 89
ALA 90
0.1229
ALA 90
SER 91
0.2064
SER 91
VAL 92
0.3549
VAL 92
ASN 93
-0.1211
ASN 93
CYS 94
-0.5031
CYS 94
ALA 95
0.5573
ALA 95
LYS 96
0.3242
LYS 96
LYS 97
0.6085
LYS 97
ILE 98
0.7393
ILE 98
VAL 99
0.6958
VAL 99
SER 100
0.3491
SER 100
ASP 101
-0.7650
ASP 101
GLY 102
1.1921
GLY 102
ASN 103
0.6780
ASN 103
GLY 104
0.8323
GLY 104
MET 105
0.5922
MET 105
ASN 106
0.7291
ASN 106
ALA 107
0.5776
ALA 107
TRP 108
0.6011
TRP 108
VAL 109
0.9109
VAL 109
ALA 110
0.5416
ALA 110
TRP 111
0.5515
TRP 111
ARG 112
0.5525
ARG 112
ASN 113
0.7450
ASN 113
ARG 114
0.6517
ARG 114
CYS 115
0.6913
CYS 115
LYS 116
0.6710
LYS 116
GLY 117
0.1730
GLY 117
THR 118
0.8552
THR 118
ASP 119
0.7683
ASP 119
VAL 120
0.1689
VAL 120
GLN 121
0.8360
GLN 121
ALA 122
0.8616
ALA 122
TRP 123
0.1322
TRP 123
ILE 124
0.8381
ILE 124
ARG 125
0.7165
ARG 125
GLY 126
0.9114
GLY 126
CYS 127
0.4727
CYS 127
ARG 128
1.4622
ARG 128
LEU 129
1.3387
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.