CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.3153
VAL 2PHE 3 0.4472
PHE 3GLY 4 0.7436
GLY 4ARG 5 0.0826
ARG 5CYS 6 0.9237
CYS 6GLU 7 0.7673
GLU 7LEU 8 0.6356
LEU 8ALA 9 0.5010
ALA 9ALA 10 0.4685
ALA 10ALA 11 0.7077
ALA 11MET 12 0.4417
MET 12LYS 13 0.7355
LYS 13ARG 14 0.0888
ARG 14HIS 15 0.5145
HIS 15GLY 16 0.6835
GLY 16LEU 17 0.4735
LEU 17ASP 18 0.2808
ASP 18ASN 19 0.6649
ASN 19TYR 20 0.0931
TYR 20ARG 21 0.6399
ARG 21GLY 22 -0.0902
GLY 22TYR 23 0.6849
TYR 23SER 24 0.5658
SER 24LEU 25 0.5992
LEU 25GLY 26 0.6086
GLY 26ASN 27 0.6746
ASN 27TRP 28 0.1380
TRP 28VAL 29 0.6848
VAL 29CYS 30 0.4910
CYS 30ALA 31 0.4125
ALA 31ALA 32 0.2059
ALA 32LYS 33 0.6575
LYS 33PHE 34 0.5760
PHE 34GLU 35 0.6272
GLU 35SER 36 -0.0076
SER 36ASN 37 0.8025
ASN 37PHE 38 0.3966
PHE 38ASN 39 0.6624
ASN 39THR 40 0.0986
THR 40GLN 41 0.6406
GLN 41ALA 42 0.4523
ALA 42THR 43 1.1794
THR 43ASN 44 1.1141
ASN 44ARG 45 1.3492
ARG 45ASN 46 1.3157
ASN 46THR 47 1.4700
THR 47ASP 48 1.3978
ASP 48GLY 49 1.2815
GLY 49SER 50 1.2534
SER 50THR 51 1.1459
THR 51ASP 52 0.9917
ASP 52TYR 53 0.9775
TYR 53GLY 54 0.7778
GLY 54ILE 55 0.6554
ILE 55LEU 56 -0.1692
LEU 56GLN 57 0.2555
GLN 57ILE 58 0.7283
ILE 58ASN 59 1.0649
ASN 59SER 60 0.0939
SER 60ARG 61 1.2098
ARG 61TRP 62 0.9452
TRP 62TRP 63 1.1924
TRP 63CYS 64 0.6667
CYS 64ASN 65 0.2276
ASN 65ASP 66 1.1800
ASP 66GLY 67 -0.2627
GLY 67ARG 68 1.3179
ARG 68THR 69 1.1170
THR 69PRO 70 1.1515
PRO 70GLY 71 1.2913
GLY 71SER 72 1.2057
SER 72ARG 73 1.1739
ARG 73ASN 74 1.1613
ASN 74LEU 75 0.4754
LEU 75CYS 76 1.0489
CYS 76ASN 77 1.0021
ASN 77ILE 78 1.0827
ILE 78PRO 79 0.8947
PRO 79CYS 80 0.8575
CYS 80SER 81 0.7681
SER 81ALA 82 0.7039
ALA 82LEU 83 0.4999
LEU 83LEU 84 0.5646
LEU 84SER 85 0.6876
SER 85SER 86 0.2949
SER 86ASP 87 0.1153
ASP 87ILE 88 0.0944
ILE 88THR 89 -0.1787
THR 89ALA 90 0.1229
ALA 90SER 91 0.2064
SER 91VAL 92 0.3549
VAL 92ASN 93 -0.1211
ASN 93CYS 94 -0.5031
CYS 94ALA 95 0.5573
ALA 95LYS 96 0.3242
LYS 96LYS 97 0.6085
LYS 97ILE 98 0.7393
ILE 98VAL 99 0.6958
VAL 99SER 100 0.3491
SER 100ASP 101 -0.7650
ASP 101GLY 102 1.1921
GLY 102ASN 103 0.6780
ASN 103GLY 104 0.8323
GLY 104MET 105 0.5922
MET 105ASN 106 0.7291
ASN 106ALA 107 0.5776
ALA 107TRP 108 0.6011
TRP 108VAL 109 0.9109
VAL 109ALA 110 0.5416
ALA 110TRP 111 0.5515
TRP 111ARG 112 0.5525
ARG 112ASN 113 0.7450
ASN 113ARG 114 0.6517
ARG 114CYS 115 0.6913
CYS 115LYS 116 0.6710
LYS 116GLY 117 0.1730
GLY 117THR 118 0.8552
THR 118ASP 119 0.7683
ASP 119VAL 120 0.1689
VAL 120GLN 121 0.8360
GLN 121ALA 122 0.8616
ALA 122TRP 123 0.1322
TRP 123ILE 124 0.8381
ILE 124ARG 125 0.7165
ARG 125GLY 126 0.9114
GLY 126CYS 127 0.4727
CYS 127ARG 128 1.4622
ARG 128LEU 129 1.3387

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.